RNA–Protein interactions for RNA: ENST00000463172.5

HDAC1-203, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 895 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-203ENST00000463172 IL7P13232 177 aa9.68□□□□□ -0.86
HDAC1-203ENST00000463172 SNRPD3P62318 126 aaKnown RBP9.68□□□□□ -0.86
HDAC1-203ENST00000463172 DHRS2Q13268 280 aa9.68□□□□□ -0.86
HDAC1-203ENST00000463172 GAMTQ14353 236 aa9.68□□□□□ -0.86
HDAC1-203ENST00000463172 TMEM41BQ5BJD5 291 aa9.68□□□□□ -0.86
HDAC1-203ENST00000463172 C16orf54Q6UWD8 224 aa9.68□□□□□ -0.86
HDAC1-203ENST00000463172 LYG2Q86SG7 212 aa9.68□□□□□ -0.86
HDAC1-203ENST00000463172 LILRB2Q8N423 598 aa9.68□□□□□ -0.86
HDAC1-203ENST00000463172 RNF125Q96EQ8 232 aa9.68□□□□□ -0.86
HDAC1-203ENST00000463172 PBDC1Q9BVG4 233 aa9.68□□□□□ -0.86
HDAC1-203ENST00000463172 FBXL17Q9UF56 701 aa9.68□□□□□ -0.86
HDAC1-203ENST00000463172 STRAPQ9Y3F4 350 aaKnown RBP9.68□□□□□ -0.86
HDAC1-203ENST00000463172 U3KQE9 123 aa9.68□□□□□ -0.86
HDAC1-203ENST00000463172 CSMD3Q7Z407 3707 aa9.68□□□□□ -0.86
HDAC1-203ENST00000463172 STARD9Q9P2P6 4700 aa9.67□□□□□ -0.86
HDAC1-203ENST00000463172 SNRPGP15A8MWD9 76 aa9.67□□□□□ -0.86
HDAC1-203ENST00000463172 K7EQG2 157 aa9.67□□□□□ -0.86
HDAC1-203ENST00000463172 USF2Q15853 346 aaPredicted RBP9.67□□□□□ -0.86
HDAC1-203ENST00000463172 PPP1R14BQ96C90 147 aa9.67□□□□□ -0.86
HDAC1-203ENST00000463172 MAGT1Q9H0U3 335 aa9.67□□□□□ -0.86
HDAC1-203ENST00000463172 SEPSECSQ9HD40 501 aaKnown RBP9.67□□□□□ -0.86
HDAC1-203ENST00000463172 CA1P00915 261 aaPredicted RBP9.66□□□□□ -0.86
HDAC1-203ENST00000463172 SPP1P10451 314 aa9.66□□□□□ -0.86
HDAC1-203ENST00000463172 ATF4P18848 351 aaPredicted RBP9.66□□□□□ -0.86
HDAC1-203ENST00000463172 NKX2-1P43699 371 aaPredicted RBP9.66□□□□□ -0.86
HDAC1-203ENST00000463172 SPANXN5Q5MJ07 72 aa9.66□□□□□ -0.86
HDAC1-203ENST00000463172 LEMD1Q68G75 181 aa9.66□□□□□ -0.86
HDAC1-203ENST00000463172 MORN3Q6PF18 240 aaPredicted RBP9.66□□□□□ -0.86
HDAC1-203ENST00000463172 SIGLEC15Q6ZMC9 328 aa9.66□□□□□ -0.86
HDAC1-203ENST00000463172 GLMPQ8WWB7 406 aa9.66□□□□□ -0.86
HDAC1-203ENST00000463172 TRGV9Q99603 122 aa9.66□□□□□ -0.86
HDAC1-203ENST00000463172 NRN1Q9NPD7 142 aa9.66□□□□□ -0.86
HDAC1-203ENST00000463172 A0A0J9YWU9 116 aa9.65□□□□□ -0.86
HDAC1-203ENST00000463172 LCE6AA0A183 80 aa9.65□□□□□ -0.86
HDAC1-203ENST00000463172 CXorf65A6NEN9 183 aa9.65□□□□□ -0.86
HDAC1-203ENST00000463172 LYRM1O43325 122 aa9.65□□□□□ -0.86
HDAC1-203ENST00000463172 BUB3O43684 328 aa9.65□□□□□ -0.86
HDAC1-203ENST00000463172 ZNF688P0C7X2 276 aa9.65□□□□□ -0.86
HDAC1-203ENST00000463172 LYZP61626 148 aa9.65□□□□□ -0.86
HDAC1-203ENST00000463172 AKR1C1Q04828 323 aa9.65□□□□□ -0.86
HDAC1-203ENST00000463172 ZNF124Q15973 351 aa9.65□□□□□ -0.86
HDAC1-203ENST00000463172 C1orf194Q5T5A4 169 aa9.65□□□□□ -0.86
HDAC1-203ENST00000463172 SAMD13Q5VXD3 122 aa9.65□□□□□ -0.86
HDAC1-203ENST00000463172 LINC00299Q6ZSB3 139 aa9.65□□□□□ -0.86
HDAC1-203ENST00000463172 SDHCQ99643 169 aaPredicted RBP9.65□□□□□ -0.86
HDAC1-203ENST00000463172 RARRES2Q99969 163 aa9.65□□□□□ -0.86
HDAC1-203ENST00000463172 CCDC32Q9BV29 185 aa9.65□□□□□ -0.86
HDAC1-203ENST00000463172 FLVCR2Q9UPI3 526 aa9.65□□□□□ -0.86
HDAC1-203ENST00000463172 NUPR2A6NF83 97 aa9.64□□□□□ -0.87
HDAC1-203ENST00000463172 ADAP1O75689 374 aa9.64□□□□□ -0.87
HDAC1-203ENST00000463172 ANXA7P20073 488 aaKnown RBP9.64□□□□□ -0.87
HDAC1-203ENST00000463172 ID1P41134 155 aa9.64□□□□□ -0.87
HDAC1-203ENST00000463172 NUTF2P61970 127 aaKnown RBP9.64□□□□□ -0.87
HDAC1-203ENST00000463172 ID3Q02535 119 aa9.64□□□□□ -0.87
HDAC1-203ENST00000463172 ZNF846Q147U1 533 aa9.64□□□□□ -0.87
HDAC1-203ENST00000463172 S100A7AQ86SG5 101 aa9.64□□□□□ -0.87
HDAC1-203ENST00000463172 THAP8Q8NA92 274 aa9.64□□□□□ -0.87
HDAC1-203ENST00000463172 BPIFCQ8NFQ6 507 aa9.64□□□□□ -0.87
HDAC1-203ENST00000463172 DCANP1Q8TF63 244 aa9.64□□□□□ -0.87
HDAC1-203ENST00000463172 S100ZQ8WXG8 99 aa9.64□□□□□ -0.87
HDAC1-203ENST00000463172 C20orf85Q9H1P6 137 aa9.64□□□□□ -0.87
HDAC1-203ENST00000463172 PSENENQ9NZ42 101 aa9.64□□□□□ -0.87
HDAC1-203ENST00000463172 SCGB1D2O95969 90 aa9.63□□□□□ -0.87
HDAC1-203ENST00000463172 ZNF90Q03938 601 aa9.63□□□□□ -0.87
HDAC1-203ENST00000463172 IAH1Q2TAA2 248 aaPredicted RBP9.63□□□□□ -0.87
HDAC1-203ENST00000463172 PSMG4Q5JS54 123 aa9.63□□□□□ -0.87
HDAC1-203ENST00000463172 ACTL10Q5JWF8 245 aa9.63□□□□□ -0.87
HDAC1-203ENST00000463172 FAM24BQ8N5W8 94 aa9.63□□□□□ -0.87
HDAC1-203ENST00000463172 OR11H2Q8NH07 326 aa9.63□□□□□ -0.87
HDAC1-203ENST00000463172 MITD1Q8WV92 249 aa9.63□□□□□ -0.87
HDAC1-203ENST00000463172 RAB40CQ96S21 281 aa9.63□□□□□ -0.87
HDAC1-203ENST00000463172 SLC45A2Q9UMX9 530 aa9.63□□□□□ -0.87
HDAC1-203ENST00000463172 KLK5Q9Y337 293 aaPredicted RBP9.63□□□□□ -0.87
HDAC1-203ENST00000463172 AGRNO00468 2067 aa9.62□□□□□ -0.87
HDAC1-203ENST00000463172 IGKV1D-37A0A075B6S9 117 aa9.62□□□□□ -0.87
HDAC1-203ENST00000463172 SMCO3A2RU48 225 aa9.62□□□□□ -0.87
HDAC1-203ENST00000463172 H3BP45 60 aa9.62□□□□□ -0.87
HDAC1-203ENST00000463172 SSSCA1O60232 199 aa9.62□□□□□ -0.87
HDAC1-203ENST00000463172 BTCP35070 178 aa9.62□□□□□ -0.87
HDAC1-203ENST00000463172 POLR2GP62487 172 aaKnown RBP eCLIP9.62□□□□□ -0.87
HDAC1-203ENST00000463172 OR2F1Q13607 317 aa9.62□□□□□ -0.87
HDAC1-203ENST00000463172 MZT2BQ6NZ67 158 aa9.62□□□□□ -0.87
HDAC1-203ENST00000463172 TRPT1Q86TN4 253 aaKnown RBP9.62□□□□□ -0.87
HDAC1-203ENST00000463172 OR8I2Q8N0Y5 310 aa9.62□□□□□ -0.87
HDAC1-203ENST00000463172 OR4D5Q8NGN0 318 aa9.62□□□□□ -0.87
HDAC1-203ENST00000463172 SMIM8Q96KF7 97 aa9.62□□□□□ -0.87
HDAC1-203ENST00000463172 C1QTNF4Q9BXJ3 329 aa9.62□□□□□ -0.87
HDAC1-203ENST00000463172 MFFQ9GZY8 342 aa9.62□□□□□ -0.87
HDAC1-203ENST00000463172 GSKIPQ9P0R6 139 aa9.62□□□□□ -0.87
HDAC1-203ENST00000463172 MGAT4CQ9UBM8 478 aa9.62□□□□□ -0.87
HDAC1-203ENST00000463172 LYSTQ99698 3801 aa9.62□□□□□ -0.87
HDAC1-203ENST00000463172 TCRBP04435 133 aa9.61□□□□□ -0.87
HDAC1-203ENST00000463172 GALR1P47211 349 aa9.61□□□□□ -0.87
HDAC1-203ENST00000463172 MEOX2P50222 304 aa9.61□□□□□ -0.87
HDAC1-203ENST00000463172 TAS2R30P59541 319 aa9.61□□□□□ -0.87
HDAC1-203ENST00000463172 PMS2P11Q13670 270 aa9.61□□□□□ -0.87
HDAC1-203ENST00000463172 ACOT7LQ6ZUV0 252 aa9.61□□□□□ -0.87
HDAC1-203ENST00000463172 TMEM144Q7Z5S9 345 aa9.61□□□□□ -0.87
HDAC1-203ENST00000463172 OR10P1Q8NGE3 313 aa9.61□□□□□ -0.87
HDAC1-203ENST00000463172 GPR82Q96P67 336 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms