RNA–Protein interactions for RNA: ENST00000463147.1

USH2A-203, Transcript of usherin, humanhuman

TSL 2

Gene USH2A, Length 618 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-203ENST00000463147 KIF1BO60333 1816 aa2.01□□□□□ -2.09
USH2A-203ENST00000463147 MAP2P11137 1827 aaKnown RBP2.01□□□□□ -2.09
USH2A-203ENST00000463147 ECM29Q5VYK3 1845 aa2.01□□□□□ -2.09
USH2A-203ENST00000463147 KIF13BQ9NQT8 1826 aa2.01□□□□□ -2.09
USH2A-203ENST00000463147 IGKV2-24A0A0C4DH68 120 aa2.01□□□□□ -2.09
USH2A-203ENST00000463147 A0A0J9YX75 114 aa2.01□□□□□ -2.09
USH2A-203ENST00000463147 A0A1B0GV90 55 aa2.01□□□□□ -2.09
USH2A-203ENST00000463147 TCRBV3S1A0A5B6 114 aa2.01□□□□□ -2.09
USH2A-203ENST00000463147 GRIFINA4D1Z8 144 aa2.01□□□□□ -2.09
USH2A-203ENST00000463147 SDHAF1A6NFY7 115 aa2.01□□□□□ -2.09
USH2A-203ENST00000463147 ODF3BA8MYP8 253 aa2.01□□□□□ -2.09
USH2A-203ENST00000463147 G3V3Q6 166 aa2.01□□□□□ -2.09
USH2A-203ENST00000463147 UBFD1O14562 309 aaKnown RBP2.01□□□□□ -2.09
USH2A-203ENST00000463147 MRPS14O60783 128 aaKnown RBP2.01□□□□□ -2.09
USH2A-203ENST00000463147 OR7C1O76099 320 aaPredicted RBP2.01□□□□□ -2.09
USH2A-203ENST00000463147 IGKV1-5P01602 117 aa2.01□□□□□ -2.09
USH2A-203ENST00000463147 SERPINE1P05121 402 aa2.01□□□□□ -2.09
USH2A-203ENST00000463147 BPGMP07738 259 aa2.01□□□□□ -2.09
USH2A-203ENST00000463147 SRP19P09132 144 aaKnown RBP2.01□□□□□ -2.09
USH2A-203ENST00000463147 SPI1P17947 270 aa2.01□□□□□ -2.09
USH2A-203ENST00000463147 CSRP1P21291 193 aaKnown RBP2.01□□□□□ -2.09
USH2A-203ENST00000463147 RPS3P23396 243 aaKnown RBP eCLIP2.01□□□□□ -2.09
USH2A-203ENST00000463147 ETV6P41212 452 aa2.01□□□□□ -2.09
USH2A-203ENST00000463147 HIST1H3AP68431 136 aa2.01□□□□□ -2.09
USH2A-203ENST00000463147 PSPHP78330 225 aa2.01□□□□□ -2.09
USH2A-203ENST00000463147 H3F3AP84243 136 aa2.01□□□□□ -2.09
USH2A-203ENST00000463147 TFAMQ00059 246 aaKnown RBP2.01□□□□□ -2.09
USH2A-203ENST00000463147 PABPC1L2AQ5JQF8 200 aa2.01□□□□□ -2.09
USH2A-203ENST00000463147 RPL13AP3Q6NVV1 102 aa2.01□□□□□ -2.09
USH2A-203ENST00000463147 HAGHLQ6PII5 290 aaPredicted RBP2.01□□□□□ -2.09
USH2A-203ENST00000463147 DHFR2Q86XF0 187 aa2.01□□□□□ -2.09
USH2A-203ENST00000463147 C12orf45Q8N5I9 185 aaPredicted RBP2.01□□□□□ -2.09
USH2A-203ENST00000463147 CMTM2Q8TAZ6 248 aa2.01□□□□□ -2.09
USH2A-203ENST00000463147 SFT2D1Q8WV19 159 aa2.01□□□□□ -2.09
USH2A-203ENST00000463147 ROPN1LQ96C74 230 aa2.01□□□□□ -2.09
USH2A-203ENST00000463147 LINC00052Q96N35 136 aa2.01□□□□□ -2.09
USH2A-203ENST00000463147 LXNQ9BS40 222 aa2.01□□□□□ -2.09
USH2A-203ENST00000463147 ZNF471Q9BX82 626 aaPredicted RBP2.01□□□□□ -2.09
USH2A-203ENST00000463147 COMMD5Q9GZQ3 224 aa2.01□□□□□ -2.09
USH2A-203ENST00000463147 PRTFDC1Q9NRG1 225 aa2.01□□□□□ -2.09
USH2A-203ENST00000463147 UQCC1Q9NVA1 299 aa2.01□□□□□ -2.09
USH2A-203ENST00000463147 MED9Q9NWA0 146 aa2.01□□□□□ -2.09
USH2A-203ENST00000463147 FBXL12Q9NXK8 326 aa2.01□□□□□ -2.09
USH2A-203ENST00000463147 SCN3BQ9NY72 215 aa2.01□□□□□ -2.09
USH2A-203ENST00000463147 TPRKBQ9Y3C4 175 aa2.01□□□□□ -2.09
USH2A-203ENST00000463147 MROH2AA6NES4 1674 aa2.01□□□□□ -2.09
USH2A-203ENST00000463147 MROH1Q8NDA8 1641 aa2.01□□□□□ -2.09
USH2A-203ENST00000463147 GREB1Q4ZG55 1949 aa2.01□□□□□ -2.09
USH2A-203ENST00000463147 CPAMD8Q8IZJ3 1885 aa2.01□□□□□ -2.09
USH2A-203ENST00000463147 MRC1P22897 1456 aa2.01□□□□□ -2.09
USH2A-203ENST00000463147 ZNF142P52746 1687 aaPredicted RBP2□□□□□ -2.09
USH2A-203ENST00000463147 PLXND1Q9Y4D7 1925 aa2□□□□□ -2.09
USH2A-203ENST00000463147 TRBV20OR9-2A0A075B6H5 130 aa2□□□□□ -2.09
USH2A-203ENST00000463147 GNG14A0A1W2PPG7 69 aa2□□□□□ -2.09
USH2A-203ENST00000463147 A0A1W2PQD3 144 aa2□□□□□ -2.09
USH2A-203ENST00000463147 RFPL4AA6NLU0 287 aa2□□□□□ -2.09
USH2A-203ENST00000463147 RFPL4AL1F8VTS6 287 aa2□□□□□ -2.09
USH2A-203ENST00000463147 H3BPC8 53 aa2□□□□□ -2.09
USH2A-203ENST00000463147 M0R233 179 aa2□□□□□ -2.09
USH2A-203ENST00000463147 LEPROTO15243 131 aa2□□□□□ -2.09
USH2A-203ENST00000463147 ORC5O43913 435 aa2□□□□□ -2.09
USH2A-203ENST00000463147 ZNF705DP0CH99 300 aaPredicted RBP2□□□□□ -2.09
USH2A-203ENST00000463147 RBP2P50120 134 aa2□□□□□ -2.09
USH2A-203ENST00000463147 RRAS2P62070 204 aaPredicted RBP2□□□□□ -2.09
USH2A-203ENST00000463147 LSM3P62310 102 aaKnown RBP2□□□□□ -2.09
USH2A-203ENST00000463147 DEFA5Q01523 94 aa2□□□□□ -2.09
USH2A-203ENST00000463147 C12orf74Q32Q52 190 aa2□□□□□ -2.09
USH2A-203ENST00000463147 C9orf64Q5T6V5 341 aa2□□□□□ -2.09
USH2A-203ENST00000463147 GLT8D1Q68CQ7 371 aa2□□□□□ -2.09
USH2A-203ENST00000463147 XAF1Q6GPH4 301 aa2□□□□□ -2.09
USH2A-203ENST00000463147 SMARCD3Q6STE5 483 aa2□□□□□ -2.09
USH2A-203ENST00000463147 TMPPEQ6ZT21 453 aa2□□□□□ -2.09
USH2A-203ENST00000463147 LYG2Q86SG7 212 aa2□□□□□ -2.09
USH2A-203ENST00000463147 C9orf62Q8N4C0 152 aa2□□□□□ -2.09
USH2A-203ENST00000463147 OR5J2Q8NH18 312 aa2□□□□□ -2.09
USH2A-203ENST00000463147 MRPL30Q8TCC3 161 aaKnown RBP2□□□□□ -2.09
USH2A-203ENST00000463147 MAFIPQ8WZ33 124 aa2□□□□□ -2.09
USH2A-203ENST00000463147 TCEAL4Q96EI5 215 aa2□□□□□ -2.09
USH2A-203ENST00000463147 MIEN1Q9BRT3 115 aa2□□□□□ -2.09
USH2A-203ENST00000463147 C2orf88Q9BSF0 95 aa2□□□□□ -2.09
USH2A-203ENST00000463147 MIXL1Q9H2W2 232 aa2□□□□□ -2.09
USH2A-203ENST00000463147 SCP2D1Q9UJQ7 156 aa2□□□□□ -2.09
USH2A-203ENST00000463147 FUT9Q9Y231 359 aa2□□□□□ -2.09
USH2A-203ENST00000463147 FAM215AQ9Y5M1 114 aa2□□□□□ -2.09
USH2A-203ENST00000463147 SLIT2O94813 1529 aa2□□□□□ -2.09
USH2A-203ENST00000463147 TULP4Q9NRJ4 1543 aa2□□□□□ -2.09
USH2A-203ENST00000463147 SPEF2Q9C093 1822 aa2□□□□□ -2.09
USH2A-203ENST00000463147 LAMB1P07942 1786 aa2□□□□□ -2.09
USH2A-203ENST00000463147 DDX60Q8IY21 1712 aaKnown RBP2□□□□□ -2.09
USH2A-203ENST00000463147 RIC1Q4ADV7 1423 aa2□□□□□ -2.09
USH2A-203ENST00000463147 TET3O43151 1660 aa1.99□□□□□ -2.09
USH2A-203ENST00000463147 KIF1AQ12756 1690 aa1.99□□□□□ -2.09
USH2A-203ENST00000463147 MYH3P11055 1940 aa1.99□□□□□ -2.09
USH2A-203ENST00000463147 TMEM2Q9UHN6 1383 aa1.99□□□□□ -2.09
USH2A-203ENST00000463147 ADAMTS12P58397 1594 aa1.99□□□□□ -2.09
USH2A-203ENST00000463147 NWD1Q149M9 1564 aa1.99□□□□□ -2.09
USH2A-203ENST00000463147 C1orf196B1AJZ1 125 aa1.99□□□□□ -2.09
USH2A-203ENST00000463147 TSTD3H0UI37 97 aa1.99□□□□□ -2.09
USH2A-203ENST00000463147 AIPO00170 330 aa1.99□□□□□ -2.09
USH2A-203ENST00000463147 PIRO00625 290 aa1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms