RNA–Protein interactions for RNA: ENST00000463020.1

SND1-203, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 793 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-203ENST00000463020 TRAV3A0A0B4J244 114 aa11.53□□□□□ -0.56
SND1-203ENST00000463020 TRAV25A0A0B4J276 109 aa11.53□□□□□ -0.56
SND1-203ENST00000463020 WRBO00258 174 aa11.53□□□□□ -0.56
SND1-203ENST00000463020 SLC25A6P12236 298 aa11.53□□□□□ -0.56
SND1-203ENST00000463020 RPL7L1Q6DKI1 246 aaKnown RBP11.53□□□□□ -0.56
SND1-203ENST00000463020 APRG1Q8IVJ8 170 aa11.53□□□□□ -0.56
SND1-203ENST00000463020 ZBTB34Q8NCN2 500 aa11.53□□□□□ -0.56
SND1-203ENST00000463020 OR5B3Q8NH48 314 aa11.53□□□□□ -0.56
SND1-203ENST00000463020 RNASE11Q8TAA1 199 aaKnown RBP11.53□□□□□ -0.56
SND1-203ENST00000463020 A0A1B0GU03 582 aa11.52□□□□□ -0.57
SND1-203ENST00000463020 IGLC7A0M8Q6 106 aa11.52□□□□□ -0.57
SND1-203ENST00000463020 ZNF705EA8MWA4 302 aaPredicted RBP11.52□□□□□ -0.57
SND1-203ENST00000463020 OR4A47Q6IF82 309 aa11.52□□□□□ -0.57
SND1-203ENST00000463020 STPG3Q8N7X2 389 aa11.52□□□□□ -0.57
SND1-203ENST00000463020 UBAC2Q8NBM4 344 aa11.52□□□□□ -0.57
SND1-203ENST00000463020 SUN5Q8TC36 379 aa11.52□□□□□ -0.57
SND1-203ENST00000463020 TCTEX1D2Q8WW35 142 aa11.52□□□□□ -0.57
SND1-203ENST00000463020 TMEM190Q8WZ59 177 aa11.52□□□□□ -0.57
SND1-203ENST00000463020 LINC00052Q96N35 136 aa11.52□□□□□ -0.57
SND1-203ENST00000463020 SPAG8Q99932 426 aaPredicted RBP11.52□□□□□ -0.57
SND1-203ENST00000463020 MAP6D1Q9H9H5 199 aa11.52□□□□□ -0.57
SND1-203ENST00000463020 MRPL27Q9P0M9 148 aaKnown RBP11.52□□□□□ -0.57
SND1-203ENST00000463020 TRBV7-1A0A0A6YYK4 115 aa11.51□□□□□ -0.57
SND1-203ENST00000463020 KIR2DL5BA0A0G2JN68 375 aa11.51□□□□□ -0.57
SND1-203ENST00000463020 KIR2DL5BA0A0G2JPC4 375 aa11.51□□□□□ -0.57
SND1-203ENST00000463020 UBE2CO00762 179 aa11.51□□□□□ -0.57
SND1-203ENST00000463020 TSPAN4O14817 238 aa11.51□□□□□ -0.57
SND1-203ENST00000463020 DEFB4AO15263 64 aa11.51□□□□□ -0.57
SND1-203ENST00000463020 TNFSF12O43508 249 aa11.51□□□□□ -0.57
SND1-203ENST00000463020 ZNF207O43670 478 aaKnown RBP11.51□□□□□ -0.57
SND1-203ENST00000463020 OR2B8PP59922 312 aa11.51□□□□□ -0.57
SND1-203ENST00000463020 MSMO1Q15800 293 aa11.51□□□□□ -0.57
SND1-203ENST00000463020 NMSQ5H8A3 153 aa11.51□□□□□ -0.57
SND1-203ENST00000463020 FAM219AQ8IW50 185 aa11.51□□□□□ -0.57
SND1-203ENST00000463020 KIR2DL5AQ8N109 375 aa11.51□□□□□ -0.57
SND1-203ENST00000463020 OR1S2Q8NGQ3 325 aa11.51□□□□□ -0.57
SND1-203ENST00000463020 OR4S2Q8NH73 311 aa11.51□□□□□ -0.57
SND1-203ENST00000463020 KIR2DL5BQ8NHK3 375 aa11.51□□□□□ -0.57
SND1-203ENST00000463020 LSM10Q969L4 123 aaKnown RBP11.51□□□□□ -0.57
SND1-203ENST00000463020 SMIM3Q9BZL3 60 aa11.51□□□□□ -0.57
SND1-203ENST00000463020 PRELID3BQ9Y3B1 194 aa11.51□□□□□ -0.57
SND1-203ENST00000463020 IGHV3-21A0A0B4J1V1 117 aa11.5□□□□□ -0.57
SND1-203ENST00000463020 F8W735 103 aaPredicted RBP11.5□□□□□ -0.57
SND1-203ENST00000463020 MED6O75586 246 aa11.5□□□□□ -0.57
SND1-203ENST00000463020 ATG12O94817 140 aa11.5□□□□□ -0.57
SND1-203ENST00000463020 SEC11BP0C7V7 166 aa11.5□□□□□ -0.57
SND1-203ENST00000463020 MAS1LP35410 378 aa11.5□□□□□ -0.57
SND1-203ENST00000463020 SULT1A2P50226 295 aa11.5□□□□□ -0.57
SND1-203ENST00000463020 RPL8P62917 257 aaKnown RBP11.5□□□□□ -0.57
SND1-203ENST00000463020 DMBX1Q8NFW5 382 aa11.5□□□□□ -0.57
SND1-203ENST00000463020 OR10W1Q8NGF6 305 aa11.5□□□□□ -0.57
SND1-203ENST00000463020 OR51H1Q8NH63 302 aa11.5□□□□□ -0.57
SND1-203ENST00000463020 CHRDL1Q9BU40 450 aa11.5□□□□□ -0.57
SND1-203ENST00000463020 ARV1Q9H2C2 271 aa11.5□□□□□ -0.57
SND1-203ENST00000463020 FAM212BQ9NTI7 297 aaPredicted RBP11.5□□□□□ -0.57
SND1-203ENST00000463020 UFC1Q9Y3C8 167 aa11.5□□□□□ -0.57
SND1-203ENST00000463020 OR2T8A6NH00 312 aa11.49□□□□□ -0.57
SND1-203ENST00000463020 TGOLN2O43493 480 aa11.49□□□□□ -0.57
SND1-203ENST00000463020 DEFA4P12838 97 aa11.49□□□□□ -0.57
SND1-203ENST00000463020 MFAP2P55001 183 aa11.49□□□□□ -0.57
SND1-203ENST00000463020 ID3Q02535 119 aa11.49□□□□□ -0.57
SND1-203ENST00000463020 BAXQ07812 192 aa11.49□□□□□ -0.57
SND1-203ENST00000463020 ZNF266Q14584 549 aa11.49□□□□□ -0.57
SND1-203ENST00000463020 BPIFCQ8NFQ6 507 aa11.49□□□□□ -0.57
SND1-203ENST00000463020 NARS2Q96I59 477 aaKnown RBP11.49□□□□□ -0.57
SND1-203ENST00000463020 SMIM8Q96KF7 97 aa11.49□□□□□ -0.57
SND1-203ENST00000463020 GINS3Q9BRX5 216 aa11.49□□□□□ -0.57
SND1-203ENST00000463020 SSSCA1O60232 199 aa11.48□□□□□ -0.57
SND1-203ENST00000463020 PITX3O75364 302 aa11.48□□□□□ -0.57
SND1-203ENST00000463020 HIST1H1BP16401 226 aaKnown RBP11.48□□□□□ -0.57
SND1-203ENST00000463020 RAB5CP51148 216 aa11.48□□□□□ -0.57
SND1-203ENST00000463020 CAV2P51636 162 aa11.48□□□□□ -0.57
SND1-203ENST00000463020 ELLP55199 621 aaPredicted RBP11.48□□□□□ -0.57
SND1-203ENST00000463020 POLR2GP62487 172 aaKnown RBP eCLIP11.48□□□□□ -0.57
SND1-203ENST00000463020 CATR1Q13166 79 aa11.48□□□□□ -0.57
SND1-203ENST00000463020 VSTM2AQ8TAG5 236 aa11.48□□□□□ -0.57
SND1-203ENST00000463020 CD300LFQ8TDQ1 290 aa11.48□□□□□ -0.57
SND1-203ENST00000463020 RAB40CQ96S21 281 aa11.48□□□□□ -0.57
SND1-203ENST00000463020 C11orf1Q9H5F2 150 aa11.48□□□□□ -0.57
SND1-203ENST00000463020 STRAPQ9Y3F4 350 aaKnown RBP11.48□□□□□ -0.57
SND1-203ENST00000463020 HSPG2P98160 4391 aa11.47□□□□□ -0.57
SND1-203ENST00000463020 A0A1B0GVY2 172 aa11.47□□□□□ -0.57
SND1-203ENST00000463020 ADMP35318 185 aa11.47□□□□□ -0.57
SND1-203ENST00000463020 AKR1C2P52895 323 aa11.47□□□□□ -0.57
SND1-203ENST00000463020 PXDC1Q5TGL8 231 aa11.47□□□□□ -0.57
SND1-203ENST00000463020 TMEM217Q8N7C4 229 aa11.47□□□□□ -0.57
SND1-203ENST00000463020 C11orf45Q8TAV5 145 aa11.47□□□□□ -0.57
SND1-203ENST00000463020 GPR146Q96CH1 333 aa11.47□□□□□ -0.57
SND1-203ENST00000463020 HSD17B10Q99714 261 aaKnown RBP11.47□□□□□ -0.57
SND1-203ENST00000463020 LYRM2Q9NU23 88 aaPredicted RBP11.47□□□□□ -0.57
SND1-203ENST00000463020 BET1LQ9NYM9 111 aa11.47□□□□□ -0.57
SND1-203ENST00000463020 APLNQ9ULZ1 77 aa11.47□□□□□ -0.57
SND1-203ENST00000463020 IGHV3-49A0A0A0MS15 119 aa11.46□□□□□ -0.57
SND1-203ENST00000463020 FAM24AA6NFZ4 105 aa11.46□□□□□ -0.57
SND1-203ENST00000463020 APOC3P02656 99 aa11.46□□□□□ -0.57
SND1-203ENST00000463020 WT1-ASQ06250 92 aa11.46□□□□□ -0.57
SND1-203ENST00000463020 STX12Q86Y82 276 aa11.46□□□□□ -0.57
SND1-203ENST00000463020 SPAG16Q8N0X2 631 aa11.46□□□□□ -0.57
SND1-203ENST00000463020 TMEM252Q8N6L7 170 aa11.46□□□□□ -0.57
SND1-203ENST00000463020 RNF2Q99496 336 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 127.7 ms