RNA–Protein interactions for RNA: ENST00000462787.5

SMC4-204, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 5,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-204ENST00000462787 CACNA1DQ01668 2161 aa13.02□□□□□ -0.33
SMC4-204ENST00000462787 LOC105371242A0A075B767 164 aa13.02□□□□□ -0.33
SMC4-204ENST00000462787 HTN1P15515 57 aa13.02□□□□□ -0.33
SMC4-204ENST00000462787 FAM201AQ5SY85 155 aa13.02□□□□□ -0.33
SMC4-204ENST00000462787 FAM71F2Q6NXP2 309 aa13.02□□□□□ -0.33
SMC4-204ENST00000462787 C20orf204Q6ZNR8 217 aa13.02□□□□□ -0.33
SMC4-204ENST00000462787 GTSCR1Q86UQ5 136 aa13.02□□□□□ -0.33
SMC4-204ENST00000462787 GGNQ86UU5 652 aa13.02□□□□□ -0.33
SMC4-204ENST00000462787 DLX4Q92988 240 aaPredicted RBP13.02□□□□□ -0.33
SMC4-204ENST00000462787 RNF125Q96EQ8 232 aa13.02□□□□□ -0.33
SMC4-204ENST00000462787 TRAV3A0A0B4J244 114 aa13.01□□□□□ -0.33
SMC4-204ENST00000462787 TOMM40O96008 361 aa13.01□□□□□ -0.33
SMC4-204ENST00000462787 GEMIN7Q9H840 131 aaKnown RBP13.01□□□□□ -0.33
SMC4-204ENST00000462787 TRAV8-4A0A0B4J246 113 aa13.01□□□□□ -0.33
SMC4-204ENST00000462787 EEF1AKMT3Q96AZ1 226 aa13.01□□□□□ -0.33
SMC4-204ENST00000462787 SCRT1Q9BWW7 348 aa13.01□□□□□ -0.33
SMC4-204ENST00000462787 PLA2G2EQ9NZK7 142 aa13.01□□□□□ -0.33
SMC4-204ENST00000462787 SELENOKQ9Y6D0 94 aa13.01□□□□□ -0.33
SMC4-204ENST00000462787 TPRP12270 2363 aaKnown RBP13.01□□□□□ -0.33
SMC4-204ENST00000462787 SFTA2Q6UW10 78 aa13.01□□□□□ -0.33
SMC4-204ENST00000462787 LINC01549A6NIU2 74 aa13.01□□□□□ -0.33
SMC4-204ENST00000462787 C19orf54Q5BKX5 351 aa13.01□□□□□ -0.33
SMC4-204ENST00000462787 CT83Q5H943 113 aa13.01□□□□□ -0.33
SMC4-204ENST00000462787 K7EP34 96 aa13□□□□□ -0.33
SMC4-204ENST00000462787 FAM159AQ6UWV7 190 aa13□□□□□ -0.33
SMC4-204ENST00000462787 ZNF329Q86UD4 541 aa13□□□□□ -0.33
SMC4-204ENST00000462787 CDX4O14627 284 aaPredicted RBP13□□□□□ -0.33
SMC4-204ENST00000462787 ZNF56Q15929 161 aa13□□□□□ -0.33
SMC4-204ENST00000462787 TRGV9Q99603 122 aa13□□□□□ -0.33
SMC4-204ENST00000462787 TRPM7Q96QT4 1865 aa13□□□□□ -0.33
SMC4-204ENST00000462787 ETV2O00321 342 aaPredicted RBP13□□□□□ -0.33
SMC4-204ENST00000462787 SLC25A39Q9BZJ4 359 aaPredicted RBP13□□□□□ -0.33
SMC4-204ENST00000462787 FAM231DQ6ZW35 169 aa13□□□□□ -0.33
SMC4-204ENST00000462787 C11orf52Q96A22 123 aa13□□□□□ -0.33
SMC4-204ENST00000462787 RNF166Q96A37 237 aaPredicted RBP13□□□□□ -0.33
SMC4-204ENST00000462787 MBNL3Q9NUK0 354 aaKnown RBP13□□□□□ -0.33
SMC4-204ENST00000462787 DNAL4O96015 105 aa12.99□□□□□ -0.33
SMC4-204ENST00000462787 TMEM249Q2WGJ8 235 aa12.99□□□□□ -0.33
SMC4-204ENST00000462787 CHAC1Q9BUX1 264 aa12.99□□□□□ -0.33
SMC4-204ENST00000462787 ZNF492Q9P255 531 aa12.99□□□□□ -0.33
SMC4-204ENST00000462787 SMIM27A0A1W2PRY6 76 aa12.99□□□□□ -0.33
SMC4-204ENST00000462787 TFF1P04155 84 aa12.99□□□□□ -0.33
SMC4-204ENST00000462787 ZNF114Q8NC26 417 aa12.99□□□□□ -0.33
SMC4-204ENST00000462787 CYYR1Q96J86 154 aa12.99□□□□□ -0.33
SMC4-204ENST00000462787 COX8AP10176 69 aa12.99□□□□□ -0.33
SMC4-204ENST00000462787 ZNF138P52744 262 aa12.99□□□□□ -0.33
SMC4-204ENST00000462787 ATP5G2Q06055 141 aa12.99□□□□□ -0.33
SMC4-204ENST00000462787 LAGE3Q14657 143 aa12.99□□□□□ -0.33
SMC4-204ENST00000462787 SLC50A1Q9BRV3 221 aa12.99□□□□□ -0.33
SMC4-204ENST00000462787 SPANXA1Q9NS26 97 aa12.99□□□□□ -0.33
SMC4-204ENST00000462787 SPINK8P0C7L1 97 aa12.99□□□□□ -0.33
SMC4-204ENST00000462787 PLNP26678 52 aa12.99□□□□□ -0.33
SMC4-204ENST00000462787 C17orf82Q86X59 251 aaPredicted RBP12.99□□□□□ -0.33
SMC4-204ENST00000462787 ARPC1AQ92747 370 aa12.99□□□□□ -0.33
SMC4-204ENST00000462787 BVES-AS1Q5T3Y7 98 aa12.98□□□□□ -0.33
SMC4-204ENST00000462787 HAPLN4Q86UW8 402 aa12.98□□□□□ -0.33
SMC4-204ENST00000462787 IGLC7A0M8Q6 106 aa12.98□□□□□ -0.33
SMC4-204ENST00000462787 SRRM5B3KS81 715 aa12.98□□□□□ -0.33
SMC4-204ENST00000462787 IGKV1-39P01597 117 aa12.98□□□□□ -0.33
SMC4-204ENST00000462787 IGKV1D-39P04432 117 aa12.98□□□□□ -0.33
SMC4-204ENST00000462787 LYZL1Q6UWQ5 148 aa12.98□□□□□ -0.33
SMC4-204ENST00000462787 DEFB124Q8NES8 71 aa12.98□□□□□ -0.33
SMC4-204ENST00000462787 WDR90Q96KV7 1748 aa12.98□□□□□ -0.33
SMC4-204ENST00000462787 MEIG1Q5JSS6 88 aa12.98□□□□□ -0.33
SMC4-204ENST00000462787 RPUSD1Q9UJJ7 312 aaKnown RBP12.98□□□□□ -0.33
SMC4-204ENST00000462787 CCL25O15444 150 aa12.98□□□□□ -0.33
SMC4-204ENST00000462787 FAM74A4Q5TZK3 123 aa12.98□□□□□ -0.33
SMC4-204ENST00000462787 IGHV2-70DA0A0C4DH43 119 aa12.97□□□□□ -0.33
SMC4-204ENST00000462787 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.97□□□□□ -0.33
SMC4-204ENST00000462787 RNFT1Q5M7Z0 435 aa12.97□□□□□ -0.33
SMC4-204ENST00000462787 CENPVQ7Z7K6 275 aaPredicted RBP12.97□□□□□ -0.33
SMC4-204ENST00000462787 MCRIP2Q9BUT9 160 aaKnown RBP12.97□□□□□ -0.33
SMC4-204ENST00000462787 UBTD1Q9HAC8 227 aa12.97□□□□□ -0.33
SMC4-204ENST00000462787 EVI2AP22794 236 aa12.97□□□□□ -0.33
SMC4-204ENST00000462787 DPM3Q9P2X0 92 aa12.97□□□□□ -0.33
SMC4-204ENST00000462787 H7C1H1 209 aa12.97□□□□□ -0.33
SMC4-204ENST00000462787 CFHR1Q03591 330 aa12.97□□□□□ -0.33
SMC4-204ENST00000462787 SLAQ13239 276 aa12.97□□□□□ -0.33
SMC4-204ENST00000462787 PRR31Q5SQ13 230 aa12.97□□□□□ -0.33
SMC4-204ENST00000462787 PPP1R27Q86WC6 154 aa12.97□□□□□ -0.33
SMC4-204ENST00000462787 IGHV3-35A0A0C4DH35 117 aa12.96□□□□□ -0.33
SMC4-204ENST00000462787 MRAP2Q96G30 205 aa12.96□□□□□ -0.33
SMC4-204ENST00000462787 DNAJC13O75165 2243 aa12.96□□□□□ -0.33
SMC4-204ENST00000462787 FOXG1P55316 489 aaPredicted RBP12.96□□□□□ -0.33
SMC4-204ENST00000462787 TMEM167AQ8TBQ9 72 aa12.96□□□□□ -0.33
SMC4-204ENST00000462787 MGAMO43451 1857 aa12.96□□□□□ -0.34
SMC4-204ENST00000462787 VDAC2P45880 294 aaPredicted RBP12.96□□□□□ -0.34
SMC4-204ENST00000462787 ZC2HC1BQ5TFG8 222 aa12.96□□□□□ -0.34
SMC4-204ENST00000462787 ERG28Q9UKR5 140 aa12.96□□□□□ -0.34
SMC4-204ENST00000462787 VWA8A3KMH1 1905 aa12.96□□□□□ -0.34
SMC4-204ENST00000462787 CCL3L1P16619 93 aa12.95□□□□□ -0.34
SMC4-204ENST00000462787 RHOGP84095 191 aa12.95□□□□□ -0.34
SMC4-204ENST00000462787 LYPD1Q8N2G4 141 aa12.95□□□□□ -0.34
SMC4-204ENST00000462787 F8W1H4 67 aa12.95□□□□□ -0.34
SMC4-204ENST00000462787 NCR2O95944 276 aa12.95□□□□□ -0.34
SMC4-204ENST00000462787 PAX1P15863 534 aa12.95□□□□□ -0.34
SMC4-204ENST00000462787 S4R3C0 116 aa12.95□□□□□ -0.34
SMC4-204ENST00000462787 EPOPA6NHQ4 379 aa12.95□□□□□ -0.34
SMC4-204ENST00000462787 IGLV3-1P01715 115 aa12.95□□□□□ -0.34
SMC4-204ENST00000462787 COLCA1Q6ZS62 124 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms