RNA–Protein interactions for RNA: ENST00000462482.1

SKA3-204, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-204ENST00000462482 RABL2BQ9UNT1 228 aa11.1□□□□□ -0.63
SKA3-204ENST00000462482 GPR132Q9UNW8 380 aa11.1□□□□□ -0.63
SKA3-204ENST00000462482 PIGBOS1A0A0B4J2F0 54 aa11.09□□□□□ -0.63
SKA3-204ENST00000462482 ZFP92A6NM28 416 aa11.09□□□□□ -0.63
SKA3-204ENST00000462482 SPART-AS1P0CW21 52 aa11.09□□□□□ -0.63
SKA3-204ENST00000462482 PSG1P11464 419 aa11.09□□□□□ -0.63
SKA3-204ENST00000462482 HLA-DRB4P13762 266 aa11.09□□□□□ -0.63
SKA3-204ENST00000462482 CCR6P51684 374 aa11.09□□□□□ -0.63
SKA3-204ENST00000462482 ATP5IP56385 69 aaPredicted RBP11.09□□□□□ -0.63
SKA3-204ENST00000462482 IL18Q14116 193 aa11.09□□□□□ -0.63
SKA3-204ENST00000462482 NMSQ5H8A3 153 aa11.09□□□□□ -0.63
SKA3-204ENST00000462482 OR8G2PQ6IF36 304 aa11.09□□□□□ -0.63
SKA3-204ENST00000462482 CLVS1Q8IUQ0 354 aaPredicted RBP11.09□□□□□ -0.63
SKA3-204ENST00000462482 LGI3Q8N145 548 aa11.09□□□□□ -0.63
SKA3-204ENST00000462482 POM121L12Q8N7R1 296 aa11.09□□□□□ -0.63
SKA3-204ENST00000462482 COQ8AQ8NI60 647 aa11.09□□□□□ -0.63
SKA3-204ENST00000462482 DTD1Q8TEA8 209 aa11.09□□□□□ -0.63
SKA3-204ENST00000462482 SMIM4Q8WVI0 70 aa11.09□□□□□ -0.63
SKA3-204ENST00000462482 PPP1R14BQ96C90 147 aa11.09□□□□□ -0.63
SKA3-204ENST00000462482 RNF125Q96EQ8 232 aa11.09□□□□□ -0.63
SKA3-204ENST00000462482 SCP2D1Q9UJQ7 156 aa11.09□□□□□ -0.63
SKA3-204ENST00000462482 CELA1Q9UNI1 258 aa11.09□□□□□ -0.63
SKA3-204ENST00000462482 HLA-DRB4X5D2U9 266 aa11.09□□□□□ -0.63
SKA3-204ENST00000462482 KMT2AQ03164 3969 aa11.09□□□□□ -0.63
SKA3-204ENST00000462482 IGHV3OR16-12A0A075B7B8 117 aa11.08□□□□□ -0.64
SKA3-204ENST00000462482 TEX48A0A1B0GUV7 120 aa11.08□□□□□ -0.64
SKA3-204ENST00000462482 SMIM9A6NGZ8 99 aa11.08□□□□□ -0.64
SKA3-204ENST00000462482 ANXA3P12429 323 aa11.08□□□□□ -0.64
SKA3-204ENST00000462482 EMP1P54849 157 aa11.08□□□□□ -0.64
SKA3-204ENST00000462482 SMCO1Q147U7 214 aa11.08□□□□□ -0.64
SKA3-204ENST00000462482 OR4C16Q8NGL9 310 aa11.08□□□□□ -0.64
SKA3-204ENST00000462482 DIRAS2Q96HU8 199 aa11.08□□□□□ -0.64
SKA3-204ENST00000462482 SLC35E1Q96K37 410 aa11.08□□□□□ -0.64
SKA3-204ENST00000462482 LINC00052Q96N35 136 aa11.08□□□□□ -0.64
SKA3-204ENST00000462482 MIXL1Q9H2W2 232 aa11.08□□□□□ -0.64
SKA3-204ENST00000462482 IFNA21P01568 189 aa11.07□□□□□ -0.64
SKA3-204ENST00000462482 IGKV3-20P01619 116 aa11.07□□□□□ -0.64
SKA3-204ENST00000462482 SRPXP78539 464 aa11.07□□□□□ -0.64
SKA3-204ENST00000462482 GPR141Q7Z602 305 aa11.07□□□□□ -0.64
SKA3-204ENST00000462482 OR51S1Q8NGJ8 323 aa11.07□□□□□ -0.64
SKA3-204ENST00000462482 TMEM170AQ8WVE7 144 aa11.07□□□□□ -0.64
SKA3-204ENST00000462482 NEU1Q99519 415 aa11.07□□□□□ -0.64
SKA3-204ENST00000462482 RFNGQ9Y644 331 aa11.07□□□□□ -0.64
SKA3-204ENST00000462482 DNAH10Q8IVF4 4471 aa11.07□□□□□ -0.64
SKA3-204ENST00000462482 A0A0B4J2A0 478 aa11.06□□□□□ -0.64
SKA3-204ENST00000462482 CTDSP2O14595 271 aa11.06□□□□□ -0.64
SKA3-204ENST00000462482 CTDSPLO15194 276 aa11.06□□□□□ -0.64
SKA3-204ENST00000462482 AKR1C4P17516 323 aa11.06□□□□□ -0.64
SKA3-204ENST00000462482 GPX4P36969 197 aaPredicted RBP11.06□□□□□ -0.64
SKA3-204ENST00000462482 PSMB3P49720 205 aa11.06□□□□□ -0.64
SKA3-204ENST00000462482 SAMD13Q5VXD3 122 aa11.06□□□□□ -0.64
SKA3-204ENST00000462482 SPATA31B1PQ5VZV4 182 aa11.06□□□□□ -0.64
SKA3-204ENST00000462482 EBLN2Q6P2I7 272 aa11.06□□□□□ -0.64
SKA3-204ENST00000462482 FOXI2Q6ZQN5 318 aa11.06□□□□□ -0.64
SKA3-204ENST00000462482 UBE2DNLQ8IWF7 75 aa11.06□□□□□ -0.64
SKA3-204ENST00000462482 OR4B1Q8NGF8 309 aa11.06□□□□□ -0.64
SKA3-204ENST00000462482 OR1S1Q8NH92 325 aa11.06□□□□□ -0.64
SKA3-204ENST00000462482 RBKSQ9H477 322 aa11.06□□□□□ -0.64
SKA3-204ENST00000462482 MCUBQ9NWR8 336 aa11.06□□□□□ -0.64
SKA3-204ENST00000462482 HSPB7Q9UBY9 170 aa11.06□□□□□ -0.64
SKA3-204ENST00000462482 SHPKQ9UHJ6 478 aa11.06□□□□□ -0.64
SKA3-204ENST00000462482 FRAS1Q86XX4 4008 aa11.05□□□□□ -0.64
SKA3-204ENST00000462482 SNRPGP15A8MWD9 76 aa11.05□□□□□ -0.64
SKA3-204ENST00000462482 LYZP61626 148 aa11.05□□□□□ -0.64
SKA3-204ENST00000462482 RAB11AP62491 216 aa11.05□□□□□ -0.64
SKA3-204ENST00000462482 SUPT4H1P63272 117 aaKnown RBP11.05□□□□□ -0.64
SKA3-204ENST00000462482 C1orf194Q5T5A4 169 aa11.05□□□□□ -0.64
SKA3-204ENST00000462482 FAM210BQ96KR6 192 aa11.05□□□□□ -0.64
SKA3-204ENST00000462482 C7orf50Q9BRJ6 194 aaKnown RBP11.05□□□□□ -0.64
SKA3-204ENST00000462482 SAV1Q9H4B6 383 aaPredicted RBP11.05□□□□□ -0.64
SKA3-204ENST00000462482 RSL24D1Q9UHA3 163 aaKnown RBP11.05□□□□□ -0.64
SKA3-204ENST00000462482 GOLT1BQ9Y3E0 138 aa11.05□□□□□ -0.64
SKA3-204ENST00000462482 FXYD7P58549 80 aa11.04□□□□□ -0.64
SKA3-204ENST00000462482 ZNF705AQ6ZN79 300 aaPredicted RBP11.04□□□□□ -0.64
SKA3-204ENST00000462482 LYZL2Q7Z4W2 148 aa11.04□□□□□ -0.64
SKA3-204ENST00000462482 OR8I2Q8N0Y5 310 aa11.04□□□□□ -0.64
SKA3-204ENST00000462482 PRR13Q9NZ81 148 aa11.04□□□□□ -0.64
SKA3-204ENST00000462482 PAIP2BQ9ULR5 123 aaKnown RBP11.04□□□□□ -0.64
SKA3-204ENST00000462482 ANKRD20A5PA0PJZ0 165 aa11.03□□□□□ -0.64
SKA3-204ENST00000462482 PRSS29PA6NIE9 313 aa11.03□□□□□ -0.64
SKA3-204ENST00000462482 ZNF705FA8MVS1 300 aaPredicted RBP11.03□□□□□ -0.64
SKA3-204ENST00000462482 M0R2N4 97 aa11.03□□□□□ -0.64
SKA3-204ENST00000462482 HBE1P02100 147 aa11.03□□□□□ -0.64
SKA3-204ENST00000462482 ZNF705DP0CH99 300 aaPredicted RBP11.03□□□□□ -0.64
SKA3-204ENST00000462482 ZNF705BP0CI00 300 aaPredicted RBP11.03□□□□□ -0.64
SKA3-204ENST00000462482 SMIM18P0DKX4 95 aa11.03□□□□□ -0.64
SKA3-204ENST00000462482 S100A7P31151 101 aa11.03□□□□□ -0.64
SKA3-204ENST00000462482 MEOX2P50222 304 aa11.03□□□□□ -0.64
SKA3-204ENST00000462482 GAMTQ14353 236 aa11.03□□□□□ -0.64
SKA3-204ENST00000462482 CLUHP3Q96NS8 147 aa11.03□□□□□ -0.64
SKA3-204ENST00000462482 MRPS26Q9BYN8 205 aaKnown RBP11.03□□□□□ -0.64
SKA3-204ENST00000462482 HERC2O95714 4834 aa11.03□□□□□ -0.64
SKA3-204ENST00000462482 ISLRO14498 428 aa11.02□□□□□ -0.65
SKA3-204ENST00000462482 CFDP00746 253 aaPredicted RBP11.02□□□□□ -0.65
SKA3-204ENST00000462482 FAUP35544 74 aaKnown RBP11.02□□□□□ -0.65
SKA3-204ENST00000462482 RPP30P78346 268 aaKnown RBP11.02□□□□□ -0.65
SKA3-204ENST00000462482 PSG9Q00887 426 aa11.02□□□□□ -0.65
SKA3-204ENST00000462482 ZNF90Q03938 601 aa11.02□□□□□ -0.65
SKA3-204ENST00000462482 OR2F1Q13607 317 aa11.02□□□□□ -0.65
SKA3-204ENST00000462482 SPCS2Q15005 226 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms