RNA–Protein interactions for RNA: ENST00000462289.1

VPS36-202, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-202ENST00000462289 PDCD10Q9BUL8 212 aa4.32□□□□□ -1.72
VPS36-202ENST00000462289 NMES1Q9C002 83 aa4.32□□□□□ -1.72
VPS36-202ENST00000462289 ZNF355PQ9NSJ1 428 aa4.32□□□□□ -1.72
VPS36-202ENST00000462289 LSM4Q9Y4Z0 139 aaKnown RBP4.32□□□□□ -1.72
VPS36-202ENST00000462289 CEBPZOSA8MTT3 80 aa4.31□□□□□ -1.72
VPS36-202ENST00000462289 A8MZ25 164 aa4.31□□□□□ -1.72
VPS36-202ENST00000462289 SEC14L6B5MCN3 397 aa4.31□□□□□ -1.72
VPS36-202ENST00000462289 IFNA21P01568 189 aa4.31□□□□□ -1.72
VPS36-202ENST00000462289 GPR183P32249 361 aa4.31□□□□□ -1.72
VPS36-202ENST00000462289 SNCAP37840 140 aa4.31□□□□□ -1.72
VPS36-202ENST00000462289 NKX2-1P43699 371 aaPredicted RBP4.31□□□□□ -1.72
VPS36-202ENST00000462289 NPBWR1P48145 328 aa4.31□□□□□ -1.72
VPS36-202ENST00000462289 SYNJ2BPP57105 145 aa4.31□□□□□ -1.72
VPS36-202ENST00000462289 POLR2GP62487 172 aaKnown RBP eCLIP4.31□□□□□ -1.72
VPS36-202ENST00000462289 GAMTQ14353 236 aa4.31□□□□□ -1.72
VPS36-202ENST00000462289 RPEL1Q2QD12 228 aa4.31□□□□□ -1.72
VPS36-202ENST00000462289 FAM90A2PQ658T7 463 aa4.31□□□□□ -1.72
VPS36-202ENST00000462289 OR1S1Q8NH92 325 aa4.31□□□□□ -1.72
VPS36-202ENST00000462289 RNASE11Q8TAA1 199 aaKnown RBP4.31□□□□□ -1.72
VPS36-202ENST00000462289 ASB13Q8WXK3 278 aa4.31□□□□□ -1.72
VPS36-202ENST00000462289 HINT2Q9BX68 163 aa4.31□□□□□ -1.72
VPS36-202ENST00000462289 HIPK2Q9H2X6 1198 aa4.31□□□□□ -1.72
VPS36-202ENST00000462289 VSIRQ9H7M9 311 aa4.31□□□□□ -1.72
VPS36-202ENST00000462289 GPN1Q9HCN4 374 aaPredicted RBP4.31□□□□□ -1.72
VPS36-202ENST00000462289 HEYLQ9NQ87 328 aaPredicted RBP4.31□□□□□ -1.72
VPS36-202ENST00000462289 DAZ1Q9NQZ3 744 aaKnown RBP4.31□□□□□ -1.72
VPS36-202ENST00000462289 TECRQ9NZ01 308 aaKnown RBP4.31□□□□□ -1.72
VPS36-202ENST00000462289 TRAV30A0A087WSZ9 112 aa4.3□□□□□ -1.72
VPS36-202ENST00000462289 TRAV25A0A0B4J276 109 aa4.3□□□□□ -1.72
VPS36-202ENST00000462289 RPS10-NUDT3A0A1W2PQS6 291 aa4.3□□□□□ -1.72
VPS36-202ENST00000462289 WI2-2373I1.2A0A1W2PRP0 233 aa4.3□□□□□ -1.72
VPS36-202ENST00000462289 OR2T8A6NH00 312 aa4.3□□□□□ -1.72
VPS36-202ENST00000462289 ZNF785A8K8V0 405 aa4.3□□□□□ -1.72
VPS36-202ENST00000462289 G3V3Q6 166 aa4.3□□□□□ -1.72
VPS36-202ENST00000462289 H0YIZ8 118 aa4.3□□□□□ -1.72
VPS36-202ENST00000462289 K7EIL1 84 aa4.3□□□□□ -1.72
VPS36-202ENST00000462289 CCSO14618 274 aa4.3□□□□□ -1.72
VPS36-202ENST00000462289 DEDDO75618 318 aa4.3□□□□□ -1.72
VPS36-202ENST00000462289 IGHV3-23P01764 117 aa4.3□□□□□ -1.72
VPS36-202ENST00000462289 FOLR2P14207 255 aa4.3□□□□□ -1.72
VPS36-202ENST00000462289 EDN2P20800 178 aa4.3□□□□□ -1.72
VPS36-202ENST00000462289 CBLN1P23435 193 aa4.3□□□□□ -1.72
VPS36-202ENST00000462289 CRYBB3P26998 211 aa4.3□□□□□ -1.72
VPS36-202ENST00000462289 PLP1P60201 277 aa4.3□□□□□ -1.72
VPS36-202ENST00000462289 DLK1P80370 383 aa4.3□□□□□ -1.72
VPS36-202ENST00000462289 RELQ04864 619 aaPredicted RBP4.3□□□□□ -1.72
VPS36-202ENST00000462289 ARL16Q0P5N6 197 aa4.3□□□□□ -1.72
VPS36-202ENST00000462289 DEFB114Q30KQ6 69 aa4.3□□□□□ -1.72
VPS36-202ENST00000462289 FAM106AQ4KMX7 169 aa4.3□□□□□ -1.72
VPS36-202ENST00000462289 ETFRF1Q6IPR1 90 aa4.3□□□□□ -1.72
VPS36-202ENST00000462289 TOMM20LQ6UXN7 152 aa4.3□□□□□ -1.72
VPS36-202ENST00000462289 ZNF600Q6ZNG1 722 aa4.3□□□□□ -1.72
VPS36-202ENST00000462289 SLC16A13Q7RTY0 426 aa4.3□□□□□ -1.72
VPS36-202ENST00000462289 TMEM144Q7Z5S9 345 aa4.3□□□□□ -1.72
VPS36-202ENST00000462289 OR1S2Q8NGQ3 325 aa4.3□□□□□ -1.72
VPS36-202ENST00000462289 RAB24Q969Q5 203 aa4.3□□□□□ -1.72
VPS36-202ENST00000462289 TRGV9Q99603 122 aa4.3□□□□□ -1.72
VPS36-202ENST00000462289 FAM110AQ9BQ89 295 aa4.3□□□□□ -1.72
VPS36-202ENST00000462289 RNF126Q9BV68 326 aa4.3□□□□□ -1.72
VPS36-202ENST00000462289 GGACTQ9BVM4 153 aa4.3□□□□□ -1.72
VPS36-202ENST00000462289 ENY2Q9NPA8 101 aa4.3□□□□□ -1.72
VPS36-202ENST00000462289 LYRM2Q9NU23 88 aaPredicted RBP4.3□□□□□ -1.72
VPS36-202ENST00000462289 MRPL27Q9P0M9 148 aaKnown RBP4.3□□□□□ -1.72
VPS36-202ENST00000462289 PEMTQ9UBM1 199 aa4.3□□□□□ -1.72
VPS36-202ENST00000462289 ZMAT5Q9UDW3 170 aaKnown RBP4.3□□□□□ -1.72
VPS36-202ENST00000462289 MLXQ9UH92 298 aa4.3□□□□□ -1.72
VPS36-202ENST00000462289 ZNF256Q9Y2P7 627 aaPredicted RBP4.3□□□□□ -1.72
VPS36-202ENST00000462289 S4R3C0 116 aa4.3□□□□□ -1.72
VPS36-202ENST00000462289 HUWE1Q7Z6Z7 4374 aaKnown RBP4.3□□□□□ -1.72
VPS36-202ENST00000462289 NBEAL2Q6ZNJ1 2754 aa4.3□□□□□ -1.72
VPS36-202ENST00000462289 AGRNO00468 2067 aa4.3□□□□□ -1.72
VPS36-202ENST00000462289 NUPL2O15504 423 aaKnown RBP4.29□□□□□ -1.72
VPS36-202ENST00000462289 GNG7O60262 68 aa4.29□□□□□ -1.72
VPS36-202ENST00000462289 TOMM40O96008 361 aa4.29□□□□□ -1.72
VPS36-202ENST00000462289 IFNA10P01566 189 aa4.29□□□□□ -1.72
VPS36-202ENST00000462289 IAPPP10997 89 aa4.29□□□□□ -1.72
VPS36-202ENST00000462289 CXCL3P19876 107 aa4.29□□□□□ -1.72
VPS36-202ENST00000462289 OPRK1P41145 380 aa4.29□□□□□ -1.72
VPS36-202ENST00000462289 RND2P52198 227 aa4.29□□□□□ -1.72
VPS36-202ENST00000462289 CYCSP99999 105 aaKnown RBP4.29□□□□□ -1.72
VPS36-202ENST00000462289 RAB32Q13637 225 aa4.29□□□□□ -1.72
VPS36-202ENST00000462289 RGS21Q2M5E4 152 aa4.29□□□□□ -1.72
VPS36-202ENST00000462289 GSG1LQ6UXU4 331 aa4.29□□□□□ -1.72
VPS36-202ENST00000462289 LINC00322Q6ZN03 302 aaPredicted RBP4.29□□□□□ -1.72
VPS36-202ENST00000462289 OR11H7Q8NGC8 314 aa4.29□□□□□ -1.72
VPS36-202ENST00000462289 ELOVL1Q9BW60 279 aa4.29□□□□□ -1.72
VPS36-202ENST00000462289 MAGT1Q9H0U3 335 aa4.29□□□□□ -1.72
VPS36-202ENST00000462289 MGAT4CQ9UBM8 478 aa4.29□□□□□ -1.72
VPS36-202ENST00000462289 SMPXQ9UHP9 88 aa4.29□□□□□ -1.72
VPS36-202ENST00000462289 SLC45A2Q9UMX9 530 aa4.29□□□□□ -1.72
VPS36-202ENST00000462289 UFC1Q9Y3C8 167 aa4.29□□□□□ -1.72
VPS36-202ENST00000462289 STRAPQ9Y3F4 350 aaKnown RBP4.29□□□□□ -1.72
VPS36-202ENST00000462289 ALG5Q9Y673 324 aa4.29□□□□□ -1.72
VPS36-202ENST00000462289 IGHV3-21A0A0B4J1V1 117 aa4.28□□□□□ -1.72
VPS36-202ENST00000462289 TRAV2A0A0B4J234 112 aa4.28□□□□□ -1.72
VPS36-202ENST00000462289 IGHV7-4-1A0A0J9YVY3 117 aa4.28□□□□□ -1.72
VPS36-202ENST00000462289 IZUMO1RA6ND01 250 aa4.28□□□□□ -1.72
VPS36-202ENST00000462289 WRBO00258 174 aa4.28□□□□□ -1.72
VPS36-202ENST00000462289 CHEK1O14757 476 aa4.28□□□□□ -1.72
VPS36-202ENST00000462289 TSPAN4O14817 238 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms