RNA–Protein interactions for RNA: ENST00000461708.1

SSB-206, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-206ENST00000461708 NXPH3O95157 252 aa12.91□□□□□ -0.34
SSB-206ENST00000461708 CCR6P51684 374 aa12.91□□□□□ -0.34
SSB-206ENST00000461708 IL18Q14116 193 aa12.91□□□□□ -0.34
SSB-206ENST00000461708 SIGLEC15Q6ZMC9 328 aa12.91□□□□□ -0.34
SSB-206ENST00000461708 BCL7BQ9BQE9 202 aa12.91□□□□□ -0.34
SSB-206ENST00000461708 CCDC59Q9P031 241 aaKnown RBP12.91□□□□□ -0.34
SSB-206ENST00000461708 SHPKQ9UHJ6 478 aa12.91□□□□□ -0.34
SSB-206ENST00000461708 PFDN2Q9UHV9 154 aa12.91□□□□□ -0.34
SSB-206ENST00000461708 ELOA3CA0A087WX78 387 aaPredicted RBP12.9□□□□□ -0.34
SSB-206ENST00000461708 PIGBOS1A0A0B4J2F0 54 aa12.9□□□□□ -0.34
SSB-206ENST00000461708 H3BMM0 161 aa12.9□□□□□ -0.34
SSB-206ENST00000461708 IFNA10P01566 189 aa12.9□□□□□ -0.34
SSB-206ENST00000461708 PSG1P11464 419 aa12.9□□□□□ -0.34
SSB-206ENST00000461708 RAB2BQ8WUD1 216 aa12.9□□□□□ -0.34
SSB-206ENST00000461708 ACY3Q96HD9 319 aa12.9□□□□□ -0.34
SSB-206ENST00000461708 RNF126Q9BV68 326 aa12.9□□□□□ -0.34
SSB-206ENST00000461708 RSL24D1Q9UHA3 163 aaKnown RBP12.9□□□□□ -0.34
SSB-206ENST00000461708 GPX4P36969 197 aaPredicted RBP12.89□□□□□ -0.35
SSB-206ENST00000461708 NKX2-1P43699 371 aaPredicted RBP12.89□□□□□ -0.35
SSB-206ENST00000461708 SRPXP78539 464 aa12.89□□□□□ -0.35
SSB-206ENST00000461708 KLF9Q13886 244 aaPredicted RBP12.89□□□□□ -0.35
SSB-206ENST00000461708 SMCO1Q147U7 214 aa12.89□□□□□ -0.35
SSB-206ENST00000461708 OR8G2PQ6IF36 304 aa12.89□□□□□ -0.35
SSB-206ENST00000461708 Q6ZTC4 211 aa12.89□□□□□ -0.35
SSB-206ENST00000461708 LGI3Q8N145 548 aa12.89□□□□□ -0.35
SSB-206ENST00000461708 OR51G1Q8NGK1 321 aa12.89□□□□□ -0.35
SSB-206ENST00000461708 DYNC2LI1Q8TCX1 351 aa12.89□□□□□ -0.35
SSB-206ENST00000461708 DTD1Q8TEA8 209 aa12.89□□□□□ -0.35
SSB-206ENST00000461708 CLEC5AQ9NY25 188 aa12.89□□□□□ -0.35
SSB-206ENST00000461708 HLA-DRB4P13762 266 aa12.88□□□□□ -0.35
SSB-206ENST00000461708 SUPT4H1P63272 117 aaKnown RBP12.88□□□□□ -0.35
SSB-206ENST00000461708 RNF125Q96EQ8 232 aa12.88□□□□□ -0.35
SSB-206ENST00000461708 CLUHP3Q96NS8 147 aa12.88□□□□□ -0.35
SSB-206ENST00000461708 HLA-DRB4X5D2U9 266 aa12.88□□□□□ -0.35
SSB-206ENST00000461708 IGHV4-4A0A075B6R2 117 aa12.87□□□□□ -0.35
SSB-206ENST00000461708 AMBPP02760 352 aa12.87□□□□□ -0.35
SSB-206ENST00000461708 FABP1P07148 127 aa12.87□□□□□ -0.35
SSB-206ENST00000461708 ANXA3P12429 323 aa12.87□□□□□ -0.35
SSB-206ENST00000461708 TMBIM6P55061 237 aa12.87□□□□□ -0.35
SSB-206ENST00000461708 C1orf194Q5T5A4 169 aa12.87□□□□□ -0.35
SSB-206ENST00000461708 LYZL2Q7Z4W2 148 aa12.87□□□□□ -0.35
SSB-206ENST00000461708 NEU1Q99519 415 aa12.87□□□□□ -0.35
SSB-206ENST00000461708 SOSTQ9BQB4 213 aa12.87□□□□□ -0.35
SSB-206ENST00000461708 RBKSQ9H477 322 aa12.87□□□□□ -0.35
SSB-206ENST00000461708 C12orf74Q32Q52 190 aa12.86□□□□□ -0.35
SSB-206ENST00000461708 ZNF705AQ6ZN79 300 aaPredicted RBP12.86□□□□□ -0.35
SSB-206ENST00000461708 XCL2Q9UBD3 114 aa12.86□□□□□ -0.35
SSB-206ENST00000461708 DUXBA0A1W2PPF3 345 aa12.85□□□□□ -0.35
SSB-206ENST00000461708 SMIM9A6NGZ8 99 aa12.85□□□□□ -0.35
SSB-206ENST00000461708 AKR1C4P17516 323 aa12.85□□□□□ -0.35
SSB-206ENST00000461708 GAMTQ14353 236 aa12.85□□□□□ -0.35
SSB-206ENST00000461708 SPATA31B1PQ5VZV4 182 aa12.85□□□□□ -0.35
SSB-206ENST00000461708 PRR13Q9NZ81 148 aa12.85□□□□□ -0.35
SSB-206ENST00000461708 CELA1Q9UNI1 258 aa12.85□□□□□ -0.35
SSB-206ENST00000461708 IGKV1D-37A0A075B6S9 117 aa12.84□□□□□ -0.35
SSB-206ENST00000461708 DEFB131BA0A096LNP1 70 aa12.84□□□□□ -0.35
SSB-206ENST00000461708 TMEM189A5PLL7 270 aa12.84□□□□□ -0.35
SSB-206ENST00000461708 ZFP92A6NM28 416 aa12.84□□□□□ -0.35
SSB-206ENST00000461708 ZNF705FA8MVS1 300 aaPredicted RBP12.84□□□□□ -0.35
SSB-206ENST00000461708 PITX3O75364 302 aa12.84□□□□□ -0.35
SSB-206ENST00000461708 ZNF705DP0CH99 300 aaPredicted RBP12.84□□□□□ -0.35
SSB-206ENST00000461708 ZNF705BP0CI00 300 aaPredicted RBP12.84□□□□□ -0.35
SSB-206ENST00000461708 ID1P41134 155 aa12.84□□□□□ -0.35
SSB-206ENST00000461708 PSMB3P49720 205 aa12.84□□□□□ -0.35
SSB-206ENST00000461708 SAMD13Q5VXD3 122 aa12.84□□□□□ -0.35
SSB-206ENST00000461708 SLC35E1Q96K37 410 aa12.84□□□□□ -0.35
SSB-206ENST00000461708 SLIRPQ9GZT3 109 aaKnown RBP12.84□□□□□ -0.35
SSB-206ENST00000461708 SAV1Q9H4B6 383 aaPredicted RBP12.84□□□□□ -0.35
SSB-206ENST00000461708 MCUBQ9NWR8 336 aa12.84□□□□□ -0.35
SSB-206ENST00000461708 SNRPGP15A8MWD9 76 aa12.83□□□□□ -0.36
SSB-206ENST00000461708 SLC25A6P12236 298 aa12.83□□□□□ -0.36
SSB-206ENST00000461708 TNFSF8P32971 234 aa12.83□□□□□ -0.36
SSB-206ENST00000461708 FAUP35544 74 aaKnown RBP12.83□□□□□ -0.36
SSB-206ENST00000461708 FOXI2Q6ZQN5 318 aa12.83□□□□□ -0.36
SSB-206ENST00000461708 LINC00336Q6ZUF6 198 aa12.83□□□□□ -0.36
SSB-206ENST00000461708 OR1S1Q8NH92 325 aa12.83□□□□□ -0.36
SSB-206ENST00000461708 TRGV9Q99603 122 aa12.83□□□□□ -0.36
SSB-206ENST00000461708 PBDC1Q9BVG4 233 aa12.83□□□□□ -0.36
SSB-206ENST00000461708 HERC2O95714 4834 aa12.82□□□□□ -0.36
SSB-206ENST00000461708 FABP12A6NFH5 140 aa12.82□□□□□ -0.36
SSB-206ENST00000461708 SOCS3O14543 225 aa12.82□□□□□ -0.36
SSB-206ENST00000461708 CFDP00746 253 aaPredicted RBP12.82□□□□□ -0.36
SSB-206ENST00000461708 ZNF90Q03938 601 aa12.82□□□□□ -0.36
SSB-206ENST00000461708 TMEM128Q5BJH2 165 aa12.82□□□□□ -0.36
SSB-206ENST00000461708 LRTM2Q8N967 370 aa12.82□□□□□ -0.36
SSB-206ENST00000461708 WDR12Q9GZL7 423 aaKnown RBP12.82□□□□□ -0.36
SSB-206ENST00000461708 ISLRO14498 428 aa12.81□□□□□ -0.36
SSB-206ENST00000461708 SPART-AS1P0CW21 52 aa12.81□□□□□ -0.36
SSB-206ENST00000461708 P0DMU3 169 aa12.81□□□□□ -0.36
SSB-206ENST00000461708 FAM231AP0DMU4 169 aa12.81□□□□□ -0.36
SSB-206ENST00000461708 FAM231CP0DMU5 169 aa12.81□□□□□ -0.36
SSB-206ENST00000461708 RAB11AP62491 216 aa12.81□□□□□ -0.36
SSB-206ENST00000461708 DEDD2Q8WXF8 326 aa12.81□□□□□ -0.36
SSB-206ENST00000461708 FAM210BQ96KR6 192 aa12.81□□□□□ -0.36
SSB-206ENST00000461708 NDUFAF3Q9BU61 184 aa12.81□□□□□ -0.36
SSB-206ENST00000461708 TEX48A0A1B0GUV7 120 aa12.8□□□□□ -0.36
SSB-206ENST00000461708 PAX9P55771 341 aa12.8□□□□□ -0.36
SSB-206ENST00000461708 AP3S2P59780 193 aa12.8□□□□□ -0.36
SSB-206ENST00000461708 ZNF79Q15937 498 aa12.8□□□□□ -0.36
SSB-206ENST00000461708 GDF5OSQ5U4N7 250 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms