RNA–Protein interactions for RNA: ENST00000461550.5

MRPL28-207, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 5

Gene MRPL28, Length 1,478 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-207ENST00000461550 ST8SIA2Q92186 375 aa12.95□□□□□ -0.34
MRPL28-207ENST00000461550 GINS3Q9BRX5 216 aa12.95□□□□□ -0.34
MRPL28-207ENST00000461550 MGAT4CQ9UBM8 478 aa12.95□□□□□ -0.34
MRPL28-207ENST00000461550 FAM90A26D6RGX4 464 aa12.94□□□□□ -0.34
MRPL28-207ENST00000461550 WRBO00258 174 aa12.94□□□□□ -0.34
MRPL28-207ENST00000461550 SYNGR2O43760 224 aa12.94□□□□□ -0.34
MRPL28-207ENST00000461550 MED6O75586 246 aa12.94□□□□□ -0.34
MRPL28-207ENST00000461550 SIX6O95475 246 aa12.94□□□□□ -0.34
MRPL28-207ENST00000461550 IFNA10P01566 189 aa12.94□□□□□ -0.34
MRPL28-207ENST00000461550 CXCL3P19876 107 aa12.94□□□□□ -0.34
MRPL28-207ENST00000461550 NKX2-1P43699 371 aaPredicted RBP12.94□□□□□ -0.34
MRPL28-207ENST00000461550 POLR2GP62487 172 aaKnown RBP eCLIP12.94□□□□□ -0.34
MRPL28-207ENST00000461550 ID3Q02535 119 aa12.94□□□□□ -0.34
MRPL28-207ENST00000461550 ZNF124Q15973 351 aa12.94□□□□□ -0.34
MRPL28-207ENST00000461550 SMUG1Q53HV7 270 aa12.94□□□□□ -0.34
MRPL28-207ENST00000461550 TCF24Q7RTU0 167 aa12.94□□□□□ -0.34
MRPL28-207ENST00000461550 APRG1Q8IVJ8 170 aa12.94□□□□□ -0.34
MRPL28-207ENST00000461550 LILRB2Q8N423 598 aa12.94□□□□□ -0.34
MRPL28-207ENST00000461550 SLC24A4Q8NFF2 622 aa12.94□□□□□ -0.34
MRPL28-207ENST00000461550 OR11H7Q8NGC8 314 aa12.94□□□□□ -0.34
MRPL28-207ENST00000461550 TMEM170AQ8WVE7 144 aa12.94□□□□□ -0.34
MRPL28-207ENST00000461550 STARD9Q9P2P6 4700 aa12.93□□□□□ -0.34
MRPL28-207ENST00000461550 CLN5O75503 358 aa12.93□□□□□ -0.34
MRPL28-207ENST00000461550 RPL35AP18077 110 aaKnown RBP12.93□□□□□ -0.34
MRPL28-207ENST00000461550 FAM90A2PQ658T7 463 aa12.93□□□□□ -0.34
MRPL28-207ENST00000461550 GSG1LQ6UXU4 331 aa12.93□□□□□ -0.34
MRPL28-207ENST00000461550 OR4X1Q8NH49 305 aa12.93□□□□□ -0.34
MRPL28-207ENST00000461550 OVOL2Q9BRP0 275 aa12.93□□□□□ -0.34
MRPL28-207ENST00000461550 NPY1RP25929 384 aa12.92□□□□□ -0.34
MRPL28-207ENST00000461550 TIGITQ495A1 244 aa12.92□□□□□ -0.34
MRPL28-207ENST00000461550 C2orf83Q53S99 150 aa12.92□□□□□ -0.34
MRPL28-207ENST00000461550 CLLU1Q5K131 121 aa12.92□□□□□ -0.34
MRPL28-207ENST00000461550 TEX261Q6UWH6 196 aa12.92□□□□□ -0.34
MRPL28-207ENST00000461550 WFDC3Q8IUB2 231 aa12.92□□□□□ -0.34
MRPL28-207ENST00000461550 C2orf50Q96LR7 162 aa12.92□□□□□ -0.34
MRPL28-207ENST00000461550 U3KQ87 197 aa12.92□□□□□ -0.34
MRPL28-207ENST00000461550 DYNC2H1Q8NCM8 4307 aaKnown RBP12.92□□□□□ -0.34
MRPL28-207ENST00000461550 SSSCA1O60232 199 aa12.91□□□□□ -0.34
MRPL28-207ENST00000461550 DFFBO76075 338 aa12.91□□□□□ -0.34
MRPL28-207ENST00000461550 IFNA7P01567 189 aa12.91□□□□□ -0.34
MRPL28-207ENST00000461550 IGKV1-17P01599 117 aa12.91□□□□□ -0.34
MRPL28-207ENST00000461550 MBPP02686 304 aaPredicted RBP12.91□□□□□ -0.34
MRPL28-207ENST00000461550 C4BPBP20851 252 aa12.91□□□□□ -0.34
MRPL28-207ENST00000461550 RND2P52198 227 aa12.91□□□□□ -0.34
MRPL28-207ENST00000461550 H2BFSP57053 126 aa12.91□□□□□ -0.34
MRPL28-207ENST00000461550 DEFB135Q30KP9 77 aa12.91□□□□□ -0.34
MRPL28-207ENST00000461550 VSIRQ9H7M9 311 aa12.91□□□□□ -0.34
MRPL28-207ENST00000461550 TMA7Q9Y2S6 64 aaKnown RBP12.91□□□□□ -0.34
MRPL28-207ENST00000461550 RPL11P62913 178 aaKnown RBP12.91□□□□□ -0.34
MRPL28-207ENST00000461550 PRSS54Q6PEW0 395 aa12.91□□□□□ -0.34
MRPL28-207ENST00000461550 SLC51BQ86UW2 128 aa12.91□□□□□ -0.34
MRPL28-207ENST00000461550 ZNF680Q8NEM1 530 aa12.91□□□□□ -0.34
MRPL28-207ENST00000461550 LSM5Q9Y4Y9 91 aaKnown RBP12.91□□□□□ -0.34
MRPL28-207ENST00000461550 RPS10-NUDT3A0A1W2PQS6 291 aa12.9□□□□□ -0.34
MRPL28-207ENST00000461550 H3BP45 60 aa12.9□□□□□ -0.34
MRPL28-207ENST00000461550 APOC4P55056 127 aa12.9□□□□□ -0.34
MRPL28-207ENST00000461550 SPANXN5Q5MJ07 72 aa12.9□□□□□ -0.34
MRPL28-207ENST00000461550 RNASEH2CQ8TDP1 164 aaKnown RBP12.9□□□□□ -0.34
MRPL28-207ENST00000461550 CIB3Q96Q77 187 aaPredicted RBP12.9□□□□□ -0.34
MRPL28-207ENST00000461550 MAP6D1Q9H9H5 199 aa12.9□□□□□ -0.34
MRPL28-207ENST00000461550 PSENENQ9NZ42 101 aa12.9□□□□□ -0.34
MRPL28-207ENST00000461550 RCL1Q9Y2P8 373 aaKnown RBP12.9□□□□□ -0.34
MRPL28-207ENST00000461550 IFNA4P05014 189 aa12.89□□□□□ -0.35
MRPL28-207ENST00000461550 IGLC1P0CG04 106 aa12.89□□□□□ -0.35
MRPL28-207ENST00000461550 NPPCP23582 126 aa12.89□□□□□ -0.35
MRPL28-207ENST00000461550 BMI1P35226 326 aa12.89□□□□□ -0.35
MRPL28-207ENST00000461550 TOR2AQ5JU69 321 aa12.89□□□□□ -0.35
MRPL28-207ENST00000461550 FAM24BQ8N5W8 94 aa12.89□□□□□ -0.35
MRPL28-207ENST00000461550 MS4A6AQ9H2W1 248 aa12.89□□□□□ -0.35
MRPL28-207ENST00000461550 SCGB2A1O75556 95 aa12.88□□□□□ -0.35
MRPL28-207ENST00000461550 OR10J1P30954 320 aa12.88□□□□□ -0.35
MRPL28-207ENST00000461550 PAX9P55771 341 aa12.88□□□□□ -0.35
MRPL28-207ENST00000461550 S100A10P60903 97 aa12.88□□□□□ -0.35
MRPL28-207ENST00000461550 IL15RAQ13261 267 aa12.88□□□□□ -0.35
MRPL28-207ENST00000461550 LRRC20Q8TCA0 184 aa12.88□□□□□ -0.35
MRPL28-207ENST00000461550 ACY3Q96HD9 319 aa12.88□□□□□ -0.35
MRPL28-207ENST00000461550 METTL26Q96S19 204 aa12.88□□□□□ -0.35
MRPL28-207ENST00000461550 TRAV30A0A087WSZ9 112 aa12.87□□□□□ -0.35
MRPL28-207ENST00000461550 K7EPK0 472 aa12.87□□□□□ -0.35
MRPL28-207ENST00000461550 DNASE2O00115 360 aaPredicted RBP12.87□□□□□ -0.35
MRPL28-207ENST00000461550 SPRY2O43597 315 aa12.87□□□□□ -0.35
MRPL28-207ENST00000461550 SLC25A4P12235 298 aa12.87□□□□□ -0.35
MRPL28-207ENST00000461550 PAFAH1B2P68402 229 aa12.87□□□□□ -0.35
MRPL28-207ENST00000461550 RPP30P78346 268 aaKnown RBP12.87□□□□□ -0.35
MRPL28-207ENST00000461550 RAB32Q13637 225 aa12.87□□□□□ -0.35
MRPL28-207ENST00000461550 Q6ZWC4 215 aa12.87□□□□□ -0.35
MRPL28-207ENST00000461550 STPG3Q8N7X2 389 aa12.87□□□□□ -0.35
MRPL28-207ENST00000461550 OR1S2Q8NGQ3 325 aa12.87□□□□□ -0.35
MRPL28-207ENST00000461550 NPIPB3Q92617 1050 aa12.87□□□□□ -0.35
MRPL28-207ENST00000461550 SMIM8Q96KF7 97 aa12.87□□□□□ -0.35
MRPL28-207ENST00000461550 MED9Q9NWA0 146 aa12.87□□□□□ -0.35
MRPL28-207ENST00000461550 RABAC1Q9UI14 185 aa12.87□□□□□ -0.35
MRPL28-207ENST00000461550 CRYBB3P26998 211 aa12.86□□□□□ -0.35
MRPL28-207ENST00000461550 P2RY1P47900 373 aa12.86□□□□□ -0.35
MRPL28-207ENST00000461550 RAB11AP62491 216 aa12.86□□□□□ -0.35
MRPL28-207ENST00000461550 LEMD1Q68G75 181 aa12.86□□□□□ -0.35
MRPL28-207ENST00000461550 STXBP6Q8NFX7 210 aa12.86□□□□□ -0.35
MRPL28-207ENST00000461550 NMES1Q9C002 83 aa12.86□□□□□ -0.35
MRPL28-207ENST00000461550 TMEM231Q9H6L2 316 aa12.86□□□□□ -0.35
MRPL28-207ENST00000461550 STRAPQ9Y3F4 350 aaKnown RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms