RNA–Protein interactions for RNA: ENST00000460925.1

SF3A3-202, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 793 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-202ENST00000460925 Q8WTZ3 238 aa3.94□□□□□ -1.78
SF3A3-202ENST00000460925 PHLDA1Q8WV24 401 aaPredicted RBP3.94□□□□□ -1.78
SF3A3-202ENST00000460925 LEAP2Q969E1 77 aa3.94□□□□□ -1.78
SF3A3-202ENST00000460925 FOXC2Q99958 501 aa3.94□□□□□ -1.78
SF3A3-202ENST00000460925 ARL6Q9H0F7 186 aa3.94□□□□□ -1.78
SF3A3-202ENST00000460925 PARP12Q9H0J9 701 aaKnown RBP3.94□□□□□ -1.78
SF3A3-202ENST00000460925 MRPL27Q9P0M9 148 aaKnown RBP3.94□□□□□ -1.78
SF3A3-202ENST00000460925 KAAG1Q9UBP8 84 aa3.94□□□□□ -1.78
SF3A3-202ENST00000460925 KLK11Q9UBX7 282 aa3.94□□□□□ -1.78
SF3A3-202ENST00000460925 HSPB8Q9UJY1 196 aa3.94□□□□□ -1.78
SF3A3-202ENST00000460925 TLN2Q9Y4G6 2542 aa3.93□□□□□ -1.78
SF3A3-202ENST00000460925 CREBBPQ92793 2442 aa3.93□□□□□ -1.78
SF3A3-202ENST00000460925 IGKV1-6A0A0C4DH72 117 aa3.93□□□□□ -1.78
SF3A3-202ENST00000460925 ANKRD20A5PA0PJZ0 165 aa3.93□□□□□ -1.78
SF3A3-202ENST00000460925 TMEM30CPA0ZSE6 113 aa3.93□□□□□ -1.78
SF3A3-202ENST00000460925 MSGN1A6NI15 193 aa3.93□□□□□ -1.78
SF3A3-202ENST00000460925 C12orf77C9JDV5 145 aa3.93□□□□□ -1.78
SF3A3-202ENST00000460925 NAPSAO96009 420 aa3.93□□□□□ -1.78
SF3A3-202ENST00000460925 IGKV2-30P06310 120 aa3.93□□□□□ -1.78
SF3A3-202ENST00000460925 SCTP09683 121 aa3.93□□□□□ -1.78
SF3A3-202ENST00000460925 GZMBP10144 247 aa3.93□□□□□ -1.78
SF3A3-202ENST00000460925 DLX6P56179 175 aa3.93□□□□□ -1.78
SF3A3-202ENST00000460925 PIGPP57054 158 aa3.93□□□□□ -1.78
SF3A3-202ENST00000460925 RHOBP62745 196 aa3.93□□□□□ -1.78
SF3A3-202ENST00000460925 HLA-DRB3P79483 266 aa3.93□□□□□ -1.78
SF3A3-202ENST00000460925 RUNX1Q01196 453 aa3.93□□□□□ -1.78
SF3A3-202ENST00000460925 C17orf58Q2M2W7 97 aa3.93□□□□□ -1.78
SF3A3-202ENST00000460925 RPEL1Q2QD12 228 aa3.93□□□□□ -1.78
SF3A3-202ENST00000460925 LGALSLQ3ZCW2 172 aaPredicted RBP3.93□□□□□ -1.78
SF3A3-202ENST00000460925 LRRC10Q5BKY1 277 aa3.93□□□□□ -1.78
SF3A3-202ENST00000460925 ACTL10Q5JWF8 245 aa3.93□□□□□ -1.78
SF3A3-202ENST00000460925 Q71RC1 249 aaPredicted RBP3.93□□□□□ -1.78
SF3A3-202ENST00000460925 PNKDQ8N490 385 aa3.93□□□□□ -1.78
SF3A3-202ENST00000460925 MAPKAPK5-AS1Q8N8E1 139 aa3.93□□□□□ -1.78
SF3A3-202ENST00000460925 OR10V1Q8NGI7 309 aa3.93□□□□□ -1.78
SF3A3-202ENST00000460925 RAB39BQ96DA2 213 aa3.93□□□□□ -1.78
SF3A3-202ENST00000460925 S100A16Q96FQ6 103 aaKnown RBP3.93□□□□□ -1.78
SF3A3-202ENST00000460925 SLC35E1Q96K37 410 aa3.93□□□□□ -1.78
SF3A3-202ENST00000460925 SOSTQ9BQB4 213 aa3.93□□□□□ -1.78
SF3A3-202ENST00000460925 GINS3Q9BRX5 216 aa3.93□□□□□ -1.78
SF3A3-202ENST00000460925 TUBA4BQ9H853 241 aa3.93□□□□□ -1.78
SF3A3-202ENST00000460925 CALYQ9NYX4 217 aa3.93□□□□□ -1.78
SF3A3-202ENST00000460925 OR1A1Q9P1Q5 309 aa3.93□□□□□ -1.78
SF3A3-202ENST00000460925 RPUSD1Q9UJJ7 312 aaKnown RBP3.93□□□□□ -1.78
SF3A3-202ENST00000460925 TRAPPC2LQ9UL33 140 aa3.93□□□□□ -1.78
SF3A3-202ENST00000460925 SONP18583 2426 aaKnown RBP3.93□□□□□ -1.78
SF3A3-202ENST00000460925 TRAV40A0A0B4J280 105 aa3.92□□□□□ -1.78
SF3A3-202ENST00000460925 PRAC2D3DTV9 90 aa3.92□□□□□ -1.78
SF3A3-202ENST00000460925 SDCBPO00560 298 aaPredicted RBP3.92□□□□□ -1.78
SF3A3-202ENST00000460925 HBZP02008 142 aa3.92□□□□□ -1.78
SF3A3-202ENST00000460925 APOHP02749 345 aaPredicted RBP3.92□□□□□ -1.78
SF3A3-202ENST00000460925 CD3DP04234 171 aa3.92□□□□□ -1.78
SF3A3-202ENST00000460925 CRYGDP07320 174 aa3.92□□□□□ -1.78
SF3A3-202ENST00000460925 MSMBP08118 114 aa3.92□□□□□ -1.78
SF3A3-202ENST00000460925 ADCYAP1P18509 176 aa3.92□□□□□ -1.78
SF3A3-202ENST00000460925 COX7A1P24310 79 aa3.92□□□□□ -1.78
SF3A3-202ENST00000460925 NFYBP25208 207 aa3.92□□□□□ -1.78
SF3A3-202ENST00000460925 PRSS3P35030 304 aa3.92□□□□□ -1.78
SF3A3-202ENST00000460925 HRH1P35367 487 aa3.92□□□□□ -1.78
SF3A3-202ENST00000460925 PPP1CCP36873 323 aaKnown RBP3.92□□□□□ -1.78
SF3A3-202ENST00000460925 TFPI2P48307 235 aa3.92□□□□□ -1.78
SF3A3-202ENST00000460925 PAFAH1B2P68402 229 aa3.92□□□□□ -1.78
SF3A3-202ENST00000460925 LOXL1Q08397 574 aaPredicted RBP3.92□□□□□ -1.78
SF3A3-202ENST00000460925 SMAGPQ0VAQ4 97 aa3.92□□□□□ -1.78
SF3A3-202ENST00000460925 LRRC75BQ2VPJ9 315 aa3.92□□□□□ -1.78
SF3A3-202ENST00000460925 SPATA31B1PQ5VZV4 182 aa3.92□□□□□ -1.78
SF3A3-202ENST00000460925 RUSC1-AS1Q66K80 236 aa3.92□□□□□ -1.78
SF3A3-202ENST00000460925 SLC35E4Q6ICL7 350 aa3.92□□□□□ -1.78
SF3A3-202ENST00000460925 ZNF880Q6PDB4 577 aa3.92□□□□□ -1.78
SF3A3-202ENST00000460925 TOMM20LQ6UXN7 152 aa3.92□□□□□ -1.78
SF3A3-202ENST00000460925 FAM19A1Q7Z5A9 133 aa3.92□□□□□ -1.78
SF3A3-202ENST00000460925 NFE4Q86UQ8 179 aa3.92□□□□□ -1.78
SF3A3-202ENST00000460925 Q8N7P7 452 aa3.92□□□□□ -1.78
SF3A3-202ENST00000460925 OR10G4Q8NGN3 311 aa3.92□□□□□ -1.78
SF3A3-202ENST00000460925 OR4A4PQ8NGN8 299 aa3.92□□□□□ -1.78
SF3A3-202ENST00000460925 OR4F5Q8NH21 305 aa3.92□□□□□ -1.78
SF3A3-202ENST00000460925 SMIM4Q8WVI0 70 aa3.92□□□□□ -1.78
SF3A3-202ENST00000460925 IL1F10Q8WWZ1 152 aa3.92□□□□□ -1.78
SF3A3-202ENST00000460925 ARL11Q969Q4 196 aa3.92□□□□□ -1.78
SF3A3-202ENST00000460925 ZNF714Q96N38 554 aa3.92□□□□□ -1.78
SF3A3-202ENST00000460925 DUX3Q96PT4 197 aa3.92□□□□□ -1.78
SF3A3-202ENST00000460925 UHRF2Q96PU4 802 aa3.92□□□□□ -1.78
SF3A3-202ENST00000460925 NDFIP1Q9BT67 221 aa3.92□□□□□ -1.78
SF3A3-202ENST00000460925 TAF9BQ9HBM6 251 aa3.92□□□□□ -1.78
SF3A3-202ENST00000460925 SMCO4Q9NRQ5 59 aa3.92□□□□□ -1.78
SF3A3-202ENST00000460925 SOX21Q9Y651 276 aaPredicted RBP3.92□□□□□ -1.78
SF3A3-202ENST00000460925 LINC00312Q9Y6C7 94 aa3.92□□□□□ -1.78
SF3A3-202ENST00000460925 WSB1Q9Y6I7 421 aa3.92□□□□□ -1.78
SF3A3-202ENST00000460925 TEX15Q9BXT5 2789 aa3.91□□□□□ -1.78
SF3A3-202ENST00000460925 F8P00451 2351 aa3.91□□□□□ -1.78
SF3A3-202ENST00000460925 TRGV10A0A0A0MS01 117 aa3.91□□□□□ -1.78
SF3A3-202ENST00000460925 IGKV1D-13A0A0B4J2D9 117 aa3.91□□□□□ -1.78
SF3A3-202ENST00000460925 KIR2DS1A0A191URI9 304 aa3.91□□□□□ -1.78
SF3A3-202ENST00000460925 GABARAPH6UMI1 98 aa3.91□□□□□ -1.78
SF3A3-202ENST00000460925 FABP7O15540 132 aa3.91□□□□□ -1.78
SF3A3-202ENST00000460925 ENSAO43768 121 aaKnown RBP3.91□□□□□ -1.78
SF3A3-202ENST00000460925 SCGNO76038 276 aa3.91□□□□□ -1.78
SF3A3-202ENST00000460925 FSTL3O95633 263 aa3.91□□□□□ -1.78
SF3A3-202ENST00000460925 ZNF728P0DKX0 622 aa3.91□□□□□ -1.78
SF3A3-202ENST00000460925 CGB3P0DN86 165 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms