RNA–Protein interactions for RNA: ENST00000460633.1

HLA-DQA1-205, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

Gene HLA-DQA1, Length 5,450 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-205ENST00000460633 NTF4P34130 210 aa5.17□□□□□ -1.58
HLA-DQA1-205ENST00000460633 PRR31Q5SQ13 230 aa5.17□□□□□ -1.58
HLA-DQA1-205ENST00000460633 TRAV21A0A0B4J279 112 aa5.17□□□□□ -1.58
HLA-DQA1-205ENST00000460633 C9JQL5 133 aa5.17□□□□□ -1.58
HLA-DQA1-205ENST00000460633 CELA2AP08217 269 aa5.17□□□□□ -1.58
HLA-DQA1-205ENST00000460633 FAM19A2Q8N3H0 131 aa5.17□□□□□ -1.58
HLA-DQA1-205ENST00000460633 MDS2Q8NDY4 140 aa5.17□□□□□ -1.58
HLA-DQA1-205ENST00000460633 C5orf30Q96GV9 206 aa5.17□□□□□ -1.58
HLA-DQA1-205ENST00000460633 VPREB3Q9UKI3 123 aa5.17□□□□□ -1.58
HLA-DQA1-205ENST00000460633 IGKV3D-15A0A087WSY6 115 aa5.17□□□□□ -1.58
HLA-DQA1-205ENST00000460633 TRBV6-7A0A0A0MS04 114 aa5.17□□□□□ -1.58
HLA-DQA1-205ENST00000460633 MLNRO43193 412 aa5.17□□□□□ -1.58
HLA-DQA1-205ENST00000460633 IGKV3-15P01624 115 aa5.17□□□□□ -1.58
HLA-DQA1-205ENST00000460633 PLA2G2AP14555 144 aa5.17□□□□□ -1.58
HLA-DQA1-205ENST00000460633 FBLN7Q53RD9 439 aa5.17□□□□□ -1.58
HLA-DQA1-205ENST00000460633 FAM89BQ8N5H3 189 aa5.17□□□□□ -1.58
HLA-DQA1-205ENST00000460633 KIR2DL5BQ8NHK3 375 aa5.17□□□□□ -1.58
HLA-DQA1-205ENST00000460633 RFNGQ9Y644 331 aa5.17□□□□□ -1.58
HLA-DQA1-205ENST00000460633 A0A0A6YYD4 124 aa5.17□□□□□ -1.58
HLA-DQA1-205ENST00000460633 IGHV2-70DA0A0C4DH43 119 aa5.17□□□□□ -1.58
HLA-DQA1-205ENST00000460633 ADARB2-AS1A8MUL3 147 aa5.17□□□□□ -1.58
HLA-DQA1-205ENST00000460633 ZNF585BQ52M93 769 aa5.17□□□□□ -1.58
HLA-DQA1-205ENST00000460633 TPTE2P1Q5T6R2 138 aa5.17□□□□□ -1.58
HLA-DQA1-205ENST00000460633 OVOL2Q9BRP0 275 aa5.17□□□□□ -1.58
HLA-DQA1-205ENST00000460633 IL36BQ9NZH7 164 aa5.17□□□□□ -1.58
HLA-DQA1-205ENST00000460633 CNTRLQ7Z7A1 2325 aa5.17□□□□□ -1.58
HLA-DQA1-205ENST00000460633 F5H768 121 aa5.17□□□□□ -1.58
HLA-DQA1-205ENST00000460633 SNAI2O43623 268 aa5.17□□□□□ -1.58
HLA-DQA1-205ENST00000460633 CRLF1O75462 422 aa5.17□□□□□ -1.58
HLA-DQA1-205ENST00000460633 NUDT3O95989 172 aa5.17□□□□□ -1.58
HLA-DQA1-205ENST00000460633 WT1P19544 449 aaPredicted RBP5.17□□□□□ -1.58
HLA-DQA1-205ENST00000460633 ATP5G3P48201 142 aa5.17□□□□□ -1.58
HLA-DQA1-205ENST00000460633 SRSF2Q01130 221 aaKnown RBP5.17□□□□□ -1.58
HLA-DQA1-205ENST00000460633 RASL11AQ6T310 242 aa5.17□□□□□ -1.58
HLA-DQA1-205ENST00000460633 NDUFA11Q86Y39 141 aa5.17□□□□□ -1.58
HLA-DQA1-205ENST00000460633 CACNG8Q8WXS5 425 aa5.17□□□□□ -1.58
HLA-DQA1-205ENST00000460633 SOX21Q9Y651 276 aaPredicted RBP5.17□□□□□ -1.58
HLA-DQA1-205ENST00000460633 CHCHD2Q9Y6H1 151 aaPredicted RBP5.17□□□□□ -1.58
HLA-DQA1-205ENST00000460633 IGFL2Q6UWQ7 119 aa5.16□□□□□ -1.58
HLA-DQA1-205ENST00000460633 DRAM1Q8N682 238 aa5.16□□□□□ -1.58
HLA-DQA1-205ENST00000460633 PGLYRP4Q96LB8 373 aa5.16□□□□□ -1.58
HLA-DQA1-205ENST00000460633 TM2D1Q9BX74 207 aa5.16□□□□□ -1.58
HLA-DQA1-205ENST00000460633 BPESC1Q9GZL8 116 aa5.16□□□□□ -1.58
HLA-DQA1-205ENST00000460633 PGPEP1Q9NXJ5 209 aa5.16□□□□□ -1.58
HLA-DQA1-205ENST00000460633 PIKFYVEQ9Y2I7 2098 aa5.16□□□□□ -1.58
HLA-DQA1-205ENST00000460633 NDUFA4O00483 81 aa5.16□□□□□ -1.58
HLA-DQA1-205ENST00000460633 RNASE1P07998 156 aaKnown RBP5.16□□□□□ -1.58
HLA-DQA1-205ENST00000460633 RPL35AP18077 110 aaKnown RBP5.16□□□□□ -1.58
HLA-DQA1-205ENST00000460633 TFF3Q07654 80 aa5.16□□□□□ -1.58
HLA-DQA1-205ENST00000460633 C1orf194Q5T5A4 169 aa5.16□□□□□ -1.58
HLA-DQA1-205ENST00000460633 SPSB4Q96A44 273 aa5.16□□□□□ -1.58
HLA-DQA1-205ENST00000460633 MRPL16Q9NX20 251 aaKnown RBP5.16□□□□□ -1.58
HLA-DQA1-205ENST00000460633 F11RQ9Y624 299 aaKnown RBP5.16□□□□□ -1.58
HLA-DQA1-205ENST00000460633 SDK1Q7Z5N4 2213 aa5.16□□□□□ -1.58
HLA-DQA1-205ENST00000460633 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.16□□□□□ -1.58
HLA-DQA1-205ENST00000460633 IGHV3-72A0A0B4J1Y9 119 aa5.16□□□□□ -1.58
HLA-DQA1-205ENST00000460633 A8MWP6 167 aa5.16□□□□□ -1.58
HLA-DQA1-205ENST00000460633 ZNF561-AS1K7EIQ3 104 aa5.16□□□□□ -1.58
HLA-DQA1-205ENST00000460633 HLA-DRB1P01911 266 aa5.16□□□□□ -1.58
HLA-DQA1-205ENST00000460633 SUPT4H1P63272 117 aaKnown RBP5.16□□□□□ -1.58
HLA-DQA1-205ENST00000460633 RHOGP84095 191 aa5.16□□□□□ -1.58
HLA-DQA1-205ENST00000460633 VSIRQ9H7M9 311 aa5.16□□□□□ -1.58
HLA-DQA1-205ENST00000460633 TRBV24-1A0A075B6N3 115 aa5.16□□□□□ -1.58
HLA-DQA1-205ENST00000460633 TMSB15BA0A087X1C1 80 aa5.16□□□□□ -1.58
HLA-DQA1-205ENST00000460633 SCO2A0A1W2PP80 73 aa5.16□□□□□ -1.58
HLA-DQA1-205ENST00000460633 RHODO00212 210 aa5.16□□□□□ -1.58
HLA-DQA1-205ENST00000460633 GPR183P32249 361 aa5.16□□□□□ -1.58
HLA-DQA1-205ENST00000460633 HERV-K104P63124 156 aa5.16□□□□□ -1.58
HLA-DQA1-205ENST00000460633 DNLZQ5SXM8 178 aa5.16□□□□□ -1.58
HLA-DQA1-205ENST00000460633 C9orf139Q6ZV77 190 aa5.16□□□□□ -1.58
HLA-DQA1-205ENST00000460633 TPRX1Q8N7U7 411 aa5.16□□□□□ -1.58
HLA-DQA1-205ENST00000460633 GATAD1Q8WUU5 269 aa5.16□□□□□ -1.58
HLA-DQA1-205ENST00000460633 NPCDR1Q9BY65 106 aa5.16□□□□□ -1.58
HLA-DQA1-205ENST00000460633 RBX1P62877 108 aa5.15□□□□□ -1.58
HLA-DQA1-205ENST00000460633 CENPWQ5EE01 88 aa5.15□□□□□ -1.58
HLA-DQA1-205ENST00000460633 PRNTQ86SH4 94 aa5.15□□□□□ -1.58
HLA-DQA1-205ENST00000460633 C10orf126Q8N4M7 172 aa5.15□□□□□ -1.58
HLA-DQA1-205ENST00000460633 OR11H1Q8NG94 326 aa5.15□□□□□ -1.58
HLA-DQA1-205ENST00000460633 OR11H2Q8NH07 326 aa5.15□□□□□ -1.58
HLA-DQA1-205ENST00000460633 SRXN1Q9BYN0 137 aa5.15□□□□□ -1.58
HLA-DQA1-205ENST00000460633 IGKV1D-8A0A087WSZ0 117 aa5.15□□□□□ -1.58
HLA-DQA1-205ENST00000460633 RRHO14718 337 aa5.15□□□□□ -1.58
HLA-DQA1-205ENST00000460633 ZIC3O60481 467 aa5.15□□□□□ -1.58
HLA-DQA1-205ENST00000460633 RND2P52198 227 aa5.15□□□□□ -1.58
HLA-DQA1-205ENST00000460633 Q71RC1 249 aaPredicted RBP5.15□□□□□ -1.58
HLA-DQA1-205ENST00000460633 TMEM144Q7Z5S9 345 aa5.15□□□□□ -1.58
HLA-DQA1-205ENST00000460633 ZNF525Q8N782 197 aa5.15□□□□□ -1.58
HLA-DQA1-205ENST00000460633 TMEM242Q9NWH2 141 aa5.15□□□□□ -1.58
HLA-DQA1-205ENST00000460633 ASCC3Q8N3C0 2202 aaKnown RBP5.15□□□□□ -1.58
HLA-DQA1-205ENST00000460633 A0A1B0GW64 132 aa5.15□□□□□ -1.59
HLA-DQA1-205ENST00000460633 LINC00869P0C866 280 aa5.15□□□□□ -1.59
HLA-DQA1-205ENST00000460633 GCHFRP30047 84 aa5.15□□□□□ -1.59
HLA-DQA1-205ENST00000460633 TMEM249Q2WGJ8 235 aa5.15□□□□□ -1.59
HLA-DQA1-205ENST00000460633 FAM120AOSQ5T036 256 aa5.15□□□□□ -1.59
HLA-DQA1-205ENST00000460633 C11orf44Q8N8P7 122 aa5.15□□□□□ -1.59
HLA-DQA1-205ENST00000460633 NHP2Q9NX24 153 aaKnown RBP5.15□□□□□ -1.59
HLA-DQA1-205ENST00000460633 EP400Q96L91 3159 aa5.15□□□□□ -1.59
HLA-DQA1-205ENST00000460633 FAM90A9PA6NNJ1 464 aa5.15□□□□□ -1.59
HLA-DQA1-205ENST00000460633 OCIAD2Q56VL3 154 aa5.15□□□□□ -1.59
HLA-DQA1-205ENST00000460633 TMEM178BH3BS89 294 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms