RNA–Protein interactions for RNA: ENST00000460573.5

C9orf3-209, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-209ENST00000460573 ARL16Q0P5N6 197 aa17.02■□□□□ 0.32
C9orf3-209ENST00000460573 THAP6Q8TBB0 222 aa17.02■□□□□ 0.32
C9orf3-209ENST00000460573 IGHV3OR16-8A0A075B7F1 116 aa17.01■□□□□ 0.31
C9orf3-209ENST00000460573 CFDP00746 253 aaPredicted RBP17.01■□□□□ 0.31
C9orf3-209ENST00000460573 BMI1P35226 326 aa17.01■□□□□ 0.31
C9orf3-209ENST00000460573 RAP2BP61225 183 aa17.01■□□□□ 0.31
C9orf3-209ENST00000460573 BAXQ07812 192 aa17.01■□□□□ 0.31
C9orf3-209ENST00000460573 ATP6V1FQ16864 119 aa17.01■□□□□ 0.31
C9orf3-209ENST00000460573 DEFB114Q30KQ6 69 aa17.01■□□□□ 0.31
C9orf3-209ENST00000460573 OR51G1Q8NGK1 321 aa17.01■□□□□ 0.31
C9orf3-209ENST00000460573 SMPXQ9UHP9 88 aa17.01■□□□□ 0.31
C9orf3-209ENST00000460573 IGKV1OR2-108A0A075B7D4 117 aa17■□□□□ 0.31
C9orf3-209ENST00000460573 IGHV7-4-1A0A0J9YVY3 117 aa17■□□□□ 0.31
C9orf3-209ENST00000460573 PSG1P11464 419 aa17■□□□□ 0.31
C9orf3-209ENST00000460573 LYL1P12980 280 aa17■□□□□ 0.31
C9orf3-209ENST00000460573 KRTAP10-11P60412 298 aa17■□□□□ 0.31
C9orf3-209ENST00000460573 LCN12Q6JVE5 192 aa17■□□□□ 0.31
C9orf3-209ENST00000460573 TEPPQ6URK8 271 aa17■□□□□ 0.31
C9orf3-209ENST00000460573 LILRB2Q8N423 598 aa17■□□□□ 0.31
C9orf3-209ENST00000460573 TMEM217Q8N7C4 229 aa17■□□□□ 0.31
C9orf3-209ENST00000460573 METTL26Q96S19 204 aa17■□□□□ 0.31
C9orf3-209ENST00000460573 ZNF207O43670 478 aaKnown RBP16.99■□□□□ 0.31
C9orf3-209ENST00000460573 IL4P05112 153 aa16.99■□□□□ 0.31
C9orf3-209ENST00000460573 EDN2P20800 178 aa16.99■□□□□ 0.31
C9orf3-209ENST00000460573 NPPCP23582 126 aa16.99■□□□□ 0.31
C9orf3-209ENST00000460573 ZNF90Q03938 601 aa16.99■□□□□ 0.31
C9orf3-209ENST00000460573 MBD2Q9UBB5 411 aa16.99■□□□□ 0.31
C9orf3-209ENST00000460573 ZNF256Q9Y2P7 627 aaPredicted RBP16.99■□□□□ 0.31
C9orf3-209ENST00000460573 WI2-2373I1.2A0A1W2PRP0 233 aa16.98■□□□□ 0.31
C9orf3-209ENST00000460573 SELENOTP62341 195 aa16.98■□□□□ 0.31
C9orf3-209ENST00000460573 EWSR1Q01844 656 aaKnown RBP eCLIP16.98■□□□□ 0.31
C9orf3-209ENST00000460573 VWC2Q2TAL6 325 aa16.98■□□□□ 0.31
C9orf3-209ENST00000460573 CD300EQ496F6 205 aaPredicted RBP16.98■□□□□ 0.31
C9orf3-209ENST00000460573 NARS2Q96I59 477 aaKnown RBP16.98■□□□□ 0.31
C9orf3-209ENST00000460573 UQCC1Q9NVA1 299 aa16.98■□□□□ 0.31
C9orf3-209ENST00000460573 MLXQ9UH92 298 aa16.98■□□□□ 0.31
C9orf3-209ENST00000460573 TRAV25A0A0B4J276 109 aa16.97■□□□□ 0.31
C9orf3-209ENST00000460573 A0A1W2PS18 150 aa16.97■□□□□ 0.31
C9orf3-209ENST00000460573 K7EIL1 84 aa16.97■□□□□ 0.31
C9orf3-209ENST00000460573 CD5P06127 495 aa16.97■□□□□ 0.31
C9orf3-209ENST00000460573 CRYBB3P26998 211 aa16.97■□□□□ 0.31
C9orf3-209ENST00000460573 NHLH2Q02577 135 aa16.97■□□□□ 0.31
C9orf3-209ENST00000460573 BPIFCQ8NFQ6 507 aa16.97■□□□□ 0.31
C9orf3-209ENST00000460573 RNF125Q96EQ8 232 aa16.97■□□□□ 0.31
C9orf3-209ENST00000460573 TMEM147Q9BVK8 224 aa16.97■□□□□ 0.31
C9orf3-209ENST00000460573 RHPN1-AS1Q9BWJ2 59 aa16.97■□□□□ 0.31
C9orf3-209ENST00000460573 TMEM231Q9H6L2 316 aa16.97■□□□□ 0.31
C9orf3-209ENST00000460573 CHEK1O14757 476 aa16.96■□□□□ 0.31
C9orf3-209ENST00000460573 RPL12P30050 165 aaKnown RBP16.96■□□□□ 0.31
C9orf3-209ENST00000460573 RAB31Q13636 194 aa16.96■□□□□ 0.31
C9orf3-209ENST00000460573 LAMTOR1Q6IAA8 161 aa16.96■□□□□ 0.31
C9orf3-209ENST00000460573 BTNL8Q6UX41 500 aa16.96■□□□□ 0.31
C9orf3-209ENST00000460573 CYP2G1PQ6ZSU1 146 aa16.96■□□□□ 0.31
C9orf3-209ENST00000460573 VSIRQ9H7M9 311 aa16.96■□□□□ 0.31
C9orf3-209ENST00000460573 PFDN2Q9UHV9 154 aa16.96■□□□□ 0.31
C9orf3-209ENST00000460573 LSM4Q9Y4Z0 139 aaKnown RBP16.96■□□□□ 0.31
C9orf3-209ENST00000460573 C1QBP02746 253 aa16.95■□□□□ 0.3
C9orf3-209ENST00000460573 ZFP69Q49AA0 526 aa16.95■□□□□ 0.3
C9orf3-209ENST00000460573 OR5C1Q8NGR4 320 aa16.95■□□□□ 0.3
C9orf3-209ENST00000460573 RABAC1Q9UI14 185 aa16.95■□□□□ 0.3
C9orf3-209ENST00000460573 GP9P14770 177 aa16.94■□□□□ 0.3
C9orf3-209ENST00000460573 NUP62P37198 522 aaPredicted RBP16.94■□□□□ 0.3
C9orf3-209ENST00000460573 CD300CQ08708 224 aa16.94■□□□□ 0.3
C9orf3-209ENST00000460573 OR2F1Q13607 317 aa16.94■□□□□ 0.3
C9orf3-209ENST00000460573 USF2Q15853 346 aaPredicted RBP16.94■□□□□ 0.3
C9orf3-209ENST00000460573 RBPMS2Q6ZRY4 209 aaKnown RBP16.94■□□□□ 0.3
C9orf3-209ENST00000460573 OR2T35Q8NGX2 323 aa16.94■□□□□ 0.3
C9orf3-209ENST00000460573 GRAMD2BQ96HH9 432 aa16.94■□□□□ 0.3
C9orf3-209ENST00000460573 WDR83OSQ9Y284 106 aa16.94■□□□□ 0.3
C9orf3-209ENST00000460573 HSPB11Q9Y547 144 aa16.94■□□□□ 0.3
C9orf3-209ENST00000460573 U3KQE9 123 aa16.94■□□□□ 0.3
C9orf3-209ENST00000460573 S100A7P31151 101 aa16.93■□□□□ 0.3
C9orf3-209ENST00000460573 EIF2B2P49770 351 aaKnown RBP16.93■□□□□ 0.3
C9orf3-209ENST00000460573 LYZP61626 148 aa16.93■□□□□ 0.3
C9orf3-209ENST00000460573 ZNF546Q86UE3 836 aa16.93■□□□□ 0.3
C9orf3-209ENST00000460573 PBDC1Q9BVG4 233 aa16.93■□□□□ 0.3
C9orf3-209ENST00000460573 SLC45A2Q9UMX9 530 aa16.93■□□□□ 0.3
C9orf3-209ENST00000460573 IGHV3-49A0A0A0MS15 119 aa16.92■□□□□ 0.3
C9orf3-209ENST00000460573 MPDU1O75352 247 aa16.92■□□□□ 0.3
C9orf3-209ENST00000460573 TMEM61Q8N0U2 210 aa16.92■□□□□ 0.3
C9orf3-209ENST00000460573 ST8SIA2Q92186 375 aa16.92■□□□□ 0.3
C9orf3-209ENST00000460573 HYLS1Q96M11 299 aa16.92■□□□□ 0.3
C9orf3-209ENST00000460573 RNF2Q99496 336 aa16.92■□□□□ 0.3
C9orf3-209ENST00000460573 IZUMO1RA6ND01 250 aa16.91■□□□□ 0.3
C9orf3-209ENST00000460573 ZNF785A8K8V0 405 aa16.91■□□□□ 0.3
C9orf3-209ENST00000460573 BOLA2-SMG1P6H3BVE0 249 aa16.91■□□□□ 0.3
C9orf3-209ENST00000460573 TSPAN4O14817 238 aa16.91■□□□□ 0.3
C9orf3-209ENST00000460573 AGPAT2O15120 278 aa16.91■□□□□ 0.3
C9orf3-209ENST00000460573 APOHP02749 345 aaPredicted RBP16.91■□□□□ 0.3
C9orf3-209ENST00000460573 PXDC1Q5TGL8 231 aa16.91■□□□□ 0.3
C9orf3-209ENST00000460573 IGHV3OR16-13A0A075B7E8 117 aa16.9■□□□□ 0.3
C9orf3-209ENST00000460573 IGHV3-74A0A0B4J1X5 117 aa16.9■□□□□ 0.3
C9orf3-209ENST00000460573 UBE2L5PA0A1B0GUS4 154 aa16.9■□□□□ 0.3
C9orf3-209ENST00000460573 DFFBO76075 338 aa16.9■□□□□ 0.3
C9orf3-209ENST00000460573 GATA2P23769 480 aaPredicted RBP16.9■□□□□ 0.3
C9orf3-209ENST00000460573 CAMLGP49069 296 aa16.9■□□□□ 0.3
C9orf3-209ENST00000460573 PLP1P60201 277 aa16.9■□□□□ 0.3
C9orf3-209ENST00000460573 GUCA2BQ16661 112 aa16.9■□□□□ 0.3
C9orf3-209ENST00000460573 Q5BKY6 102 aa16.9■□□□□ 0.3
C9orf3-209ENST00000460573 TMEM182Q6ZP80 229 aaPredicted RBP16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms