RNA–Protein interactions for RNA: ENST00000460408.5

RFC4-211, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-211ENST00000460408 C1orf232A0A0U1RR37 186 aa1.27□□□□□ -2.21
RFC4-211ENST00000460408 LOC105371267A0A1B0GV96 52 aa1.27□□□□□ -2.21
RFC4-211ENST00000460408 A0A1W2PPB8 328 aa1.27□□□□□ -2.21
RFC4-211ENST00000460408 A0A1W2PRS3 328 aa1.27□□□□□ -2.21
RFC4-211ENST00000460408 DHRS12A0PJE2 317 aa1.27□□□□□ -2.21
RFC4-211ENST00000460408 LINC00862A6NCI5 91 aa1.27□□□□□ -2.21
RFC4-211ENST00000460408 NUPR2A6NF83 97 aa1.27□□□□□ -2.21
RFC4-211ENST00000460408 FABP12A6NFH5 140 aa1.27□□□□□ -2.21
RFC4-211ENST00000460408 KIR3DP1A8MWS1 328 aa1.27□□□□□ -2.21
RFC4-211ENST00000460408 TXNDC9O14530 226 aa1.27□□□□□ -2.21
RFC4-211ENST00000460408 STK16O75716 305 aa1.27□□□□□ -2.21
RFC4-211ENST00000460408 P0DMU3 169 aa1.27□□□□□ -2.21
RFC4-211ENST00000460408 FAM231AP0DMU4 169 aa1.27□□□□□ -2.21
RFC4-211ENST00000460408 FAM231CP0DMU5 169 aa1.27□□□□□ -2.21
RFC4-211ENST00000460408 ESDP10768 282 aa1.27□□□□□ -2.21
RFC4-211ENST00000460408 PEBP1P30086 187 aaKnown RBP1.27□□□□□ -2.21
RFC4-211ENST00000460408 SDC4P31431 198 aa1.27□□□□□ -2.21
RFC4-211ENST00000460408 SPINT3P49223 89 aa1.27□□□□□ -2.21
RFC4-211ENST00000460408 IDH3GP51553 393 aaPredicted RBP1.27□□□□□ -2.21
RFC4-211ENST00000460408 CLDN12P56749 244 aa1.27□□□□□ -2.21
RFC4-211ENST00000460408 ARPC4P59998 168 aa1.27□□□□□ -2.21
RFC4-211ENST00000460408 TPI1P60174 286 aa1.27□□□□□ -2.21
RFC4-211ENST00000460408 POLR2GP62487 172 aaKnown RBP eCLIP1.27□□□□□ -2.21
RFC4-211ENST00000460408 SKP1P63208 163 aa1.27□□□□□ -2.21
RFC4-211ENST00000460408 MRPS15P82914 257 aaKnown RBP1.27□□□□□ -2.21
RFC4-211ENST00000460408 DR1Q01658 176 aa1.27□□□□□ -2.21
RFC4-211ENST00000460408 HES1Q14469 280 aa1.27□□□□□ -2.21
RFC4-211ENST00000460408 C8orf74Q6P047 294 aa1.27□□□□□ -2.21
RFC4-211ENST00000460408 RASL11AQ6T310 242 aa1.27□□□□□ -2.21
RFC4-211ENST00000460408 SCGB1D4Q6XE38 83 aa1.27□□□□□ -2.21
RFC4-211ENST00000460408 WFDC9Q8NEX5 89 aa1.27□□□□□ -2.21
RFC4-211ENST00000460408 OR10A6Q8NH74 314 aa1.27□□□□□ -2.21
RFC4-211ENST00000460408 FAM172AQ8WUF8 416 aa1.27□□□□□ -2.21
RFC4-211ENST00000460408 NAT14Q8WUY8 206 aa1.27□□□□□ -2.21
RFC4-211ENST00000460408 DNAJC30Q96LL9 226 aa1.27□□□□□ -2.21
RFC4-211ENST00000460408 OR7D2Q96RA2 312 aa1.27□□□□□ -2.21
RFC4-211ENST00000460408 TMEM208Q9BTX3 173 aa1.27□□□□□ -2.21
RFC4-211ENST00000460408 DOHHQ9BU89 302 aa1.27□□□□□ -2.21
RFC4-211ENST00000460408 ZNF471Q9BX82 626 aaPredicted RBP1.27□□□□□ -2.21
RFC4-211ENST00000460408 DRC3Q9H069 523 aa1.27□□□□□ -2.21
RFC4-211ENST00000460408 METTL9Q9H1A3 318 aa1.27□□□□□ -2.21
RFC4-211ENST00000460408 FKBP14Q9NWM8 211 aa1.27□□□□□ -2.21
RFC4-211ENST00000460408 DNAJC12Q9UKB3 198 aa1.27□□□□□ -2.21
RFC4-211ENST00000460408 KLK5Q9Y337 293 aaPredicted RBP1.27□□□□□ -2.21
RFC4-211ENST00000460408 SBDSQ9Y3A5 250 aaKnown RBP eCLIP1.27□□□□□ -2.21
RFC4-211ENST00000460408 ALG5Q9Y673 324 aa1.27□□□□□ -2.21
RFC4-211ENST00000460408 STARD9Q9P2P6 4700 aa1.26□□□□□ -2.21
RFC4-211ENST00000460408 FSIP2Q5CZC0 6907 aa1.26□□□□□ -2.21
RFC4-211ENST00000460408 DAPL1A0PJW8 107 aa1.26□□□□□ -2.21
RFC4-211ENST00000460408 METTL15A6NJ78 407 aa1.26□□□□□ -2.21
RFC4-211ENST00000460408 CCRL2O00421 344 aa1.26□□□□□ -2.21
RFC4-211ENST00000460408 OR2J2O76002 312 aa1.26□□□□□ -2.21
RFC4-211ENST00000460408 S1PR2O95136 353 aa1.26□□□□□ -2.21
RFC4-211ENST00000460408 HBZP02008 142 aa1.26□□□□□ -2.21
RFC4-211ENST00000460408 ATP5G1P05496 136 aa1.26□□□□□ -2.21
RFC4-211ENST00000460408 CD7P09564 240 aa1.26□□□□□ -2.21
RFC4-211ENST00000460408 PIRTP0C851 137 aa1.26□□□□□ -2.21
RFC4-211ENST00000460408 CCL3P10147 92 aa1.26□□□□□ -2.21
RFC4-211ENST00000460408 NPPCP23582 126 aa1.26□□□□□ -2.21
RFC4-211ENST00000460408 CRYBB3P26998 211 aa1.26□□□□□ -2.21
RFC4-211ENST00000460408 PPP1R2P41236 205 aa1.26□□□□□ -2.21
RFC4-211ENST00000460408 CRATP43155 626 aa1.26□□□□□ -2.21
RFC4-211ENST00000460408 CDK9P50750 372 aaKnown RBP1.26□□□□□ -2.21
RFC4-211ENST00000460408 H2BFSP57053 126 aa1.26□□□□□ -2.21
RFC4-211ENST00000460408 TMEM33P57088 247 aa1.26□□□□□ -2.21
RFC4-211ENST00000460408 SMAGPQ0VAQ4 97 aa1.26□□□□□ -2.21
RFC4-211ENST00000460408 TMEM267Q0VDI3 215 aaPredicted RBP1.26□□□□□ -2.21
RFC4-211ENST00000460408 COTL1Q14019 142 aa1.26□□□□□ -2.21
RFC4-211ENST00000460408 HLA-DRB5Q30154 266 aa1.26□□□□□ -2.21
RFC4-211ENST00000460408 KRTAP13-4Q3LI77 160 aa1.26□□□□□ -2.21
RFC4-211ENST00000460408 LGALS9CQ6DKI2 356 aa1.26□□□□□ -2.21
RFC4-211ENST00000460408 LCN8Q6JVE9 175 aa1.26□□□□□ -2.21
RFC4-211ENST00000460408 PPP1R2P3Q6NXS1 205 aa1.26□□□□□ -2.21
RFC4-211ENST00000460408 SBSPONQ8IVN8 264 aa1.26□□□□□ -2.21
RFC4-211ENST00000460408 C1orf174Q8IYL3 243 aa1.26□□□□□ -2.21
RFC4-211ENST00000460408 LRRC34Q8IZ02 419 aa1.26□□□□□ -2.21
RFC4-211ENST00000460408 LRRC25Q8N386 305 aaPredicted RBP1.26□□□□□ -2.21
RFC4-211ENST00000460408 LINC00301Q8NCQ3 95 aa1.26□□□□□ -2.21
RFC4-211ENST00000460408 TMEM35BQ8NCS4 154 aa1.26□□□□□ -2.21
RFC4-211ENST00000460408 CLDND2Q8NHS1 167 aa1.26□□□□□ -2.21
RFC4-211ENST00000460408 FNDC9Q8TBE3 224 aa1.26□□□□□ -2.21
RFC4-211ENST00000460408 C16orf78Q8WTQ4 265 aa1.26□□□□□ -2.21
RFC4-211ENST00000460408 LYSMD1Q96S90 227 aa1.26□□□□□ -2.21
RFC4-211ENST00000460408 C9orf16Q9BUW7 83 aa1.26□□□□□ -2.21
RFC4-211ENST00000460408 NDEL1Q9GZM8 345 aa1.26□□□□□ -2.21
RFC4-211ENST00000460408 DYNLRB1Q9NP97 96 aa1.26□□□□□ -2.21
RFC4-211ENST00000460408 TXNL4BQ9NX01 149 aaKnown RBP1.26□□□□□ -2.21
RFC4-211ENST00000460408 FAM206AQ9NX38 181 aa1.26□□□□□ -2.21
RFC4-211ENST00000460408 ATPIF1Q9UII2 106 aa1.26□□□□□ -2.21
RFC4-211ENST00000460408 HHLA2Q9UM44 414 aa1.26□□□□□ -2.21
RFC4-211ENST00000460408 PUS1Q9Y606 427 aaKnown RBP eCLIP1.26□□□□□ -2.21
RFC4-211ENST00000460408 FCGBPQ9Y6R7 5405 aaPredicted RBP1.26□□□□□ -2.21
RFC4-211ENST00000460408 DOCK11Q5JSL3 2073 aa1.25□□□□□ -2.21
RFC4-211ENST00000460408 DSCAML1Q8TD84 2053 aa1.25□□□□□ -2.21
RFC4-211ENST00000460408 HMCN2Q8NDA2 5059 aa1.25□□□□□ -2.21
RFC4-211ENST00000460408 FAT4Q6V0I7 4981 aa1.25□□□□□ -2.21
RFC4-211ENST00000460408 DPRXA6NFQ7 191 aa1.25□□□□□ -2.21
RFC4-211ENST00000460408 PSMD12O00232 456 aaPredicted RBP1.25□□□□□ -2.21
RFC4-211ENST00000460408 OVOL1O14753 267 aa1.25□□□□□ -2.21
RFC4-211ENST00000460408 SULT1B1O43704 296 aa1.25□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 113.6 ms