RNA–Protein interactions for RNA: ENST00000460170.2

PTPRU-205, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,337 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-205ENST00000460170 IGHV1-3A0A0C4DH29 117 aa12.09□□□□□ -0.47
PTPRU-205ENST00000460170 ITGB1BP1O14713 200 aa12.09□□□□□ -0.47
PTPRU-205ENST00000460170 ASIPP42127 132 aa12.09□□□□□ -0.47
PTPRU-205ENST00000460170 ST6GALNAC6Q969X2 333 aa12.09□□□□□ -0.47
PTPRU-205ENST00000460170 C7orf69Q9H7B7 122 aa12.09□□□□□ -0.47
PTPRU-205ENST00000460170 LY96Q9Y6Y9 160 aa12.09□□□□□ -0.47
PTPRU-205ENST00000460170 IGKV3-20P01619 116 aa12.09□□□□□ -0.47
PTPRU-205ENST00000460170 PSG1P11464 419 aa12.09□□□□□ -0.47
PTPRU-205ENST00000460170 CACNA1BQ00975 2339 aa12.09□□□□□ -0.47
PTPRU-205ENST00000460170 ADIPOQQ15848 244 aa12.09□□□□□ -0.47
PTPRU-205ENST00000460170 ERASQ7Z444 233 aa12.09□□□□□ -0.47
PTPRU-205ENST00000460170 TEX29Q8N6K0 151 aa12.09□□□□□ -0.47
PTPRU-205ENST00000460170 SLC50A1Q9BRV3 221 aa12.09□□□□□ -0.47
PTPRU-205ENST00000460170 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.09□□□□□ -0.47
PTPRU-205ENST00000460170 ERVK11-1P61568 191 aa12.09□□□□□ -0.47
PTPRU-205ENST00000460170 RHOGP84095 191 aa12.09□□□□□ -0.47
PTPRU-205ENST00000460170 SMAGPQ0VAQ4 97 aa12.08□□□□□ -0.47
PTPRU-205ENST00000460170 CENPVQ7Z7K6 275 aaPredicted RBP12.08□□□□□ -0.47
PTPRU-205ENST00000460170 USF3Q68DE3 2245 aa12.08□□□□□ -0.48
PTPRU-205ENST00000460170 ZNF56Q15929 161 aa12.08□□□□□ -0.48
PTPRU-205ENST00000460170 ATP5L2Q7Z4Y8 100 aa12.08□□□□□ -0.48
PTPRU-205ENST00000460170 WDR86Q86TI4 376 aa12.08□□□□□ -0.48
PTPRU-205ENST00000460170 TRGV9Q99603 122 aa12.08□□□□□ -0.48
PTPRU-205ENST00000460170 SPOCK3Q9BQ16 436 aa12.08□□□□□ -0.48
PTPRU-205ENST00000460170 TMEM160Q9NX00 188 aa12.08□□□□□ -0.48
PTPRU-205ENST00000460170 TTC28Q96AY4 2481 aa12.08□□□□□ -0.48
PTPRU-205ENST00000460170 ATP5LO75964 103 aa12.08□□□□□ -0.48
PTPRU-205ENST00000460170 WNT2P09544 360 aa12.08□□□□□ -0.48
PTPRU-205ENST00000460170 RAX2Q96IS3 184 aa12.08□□□□□ -0.48
PTPRU-205ENST00000460170 ASCL2Q99929 193 aa12.08□□□□□ -0.48
PTPRU-205ENST00000460170 RNF5Q99942 180 aa12.08□□□□□ -0.48
PTPRU-205ENST00000460170 OR11H12B2RN74 326 aa12.08□□□□□ -0.48
PTPRU-205ENST00000460170 H3BVH4 76 aa12.08□□□□□ -0.48
PTPRU-205ENST00000460170 IGKV1-16P04430 117 aa12.08□□□□□ -0.48
PTPRU-205ENST00000460170 OR11H1Q8NG94 326 aa12.08□□□□□ -0.48
PTPRU-205ENST00000460170 OR11H2Q8NH07 326 aa12.08□□□□□ -0.48
PTPRU-205ENST00000460170 LINC00614P0C842 121 aa12.07□□□□□ -0.48
PTPRU-205ENST00000460170 Q6ZR03 302 aa12.07□□□□□ -0.48
PTPRU-205ENST00000460170 LHFPL4Q7Z7J7 247 aa12.07□□□□□ -0.48
PTPRU-205ENST00000460170 LOC107984156A0A0G2JMH3 177 aa12.07□□□□□ -0.48
PTPRU-205ENST00000460170 IGKV1-39P01597 117 aa12.07□□□□□ -0.48
PTPRU-205ENST00000460170 IGKV1D-39P04432 117 aa12.07□□□□□ -0.48
PTPRU-205ENST00000460170 RNASE2P10153 161 aaKnown RBP12.07□□□□□ -0.48
PTPRU-205ENST00000460170 IL15RAQ13261 267 aa12.07□□□□□ -0.48
PTPRU-205ENST00000460170 ARL17AQ8IVW1 177 aa12.07□□□□□ -0.48
PTPRU-205ENST00000460170 RNF138Q8WVD3 245 aa12.07□□□□□ -0.48
PTPRU-205ENST00000460170 SRCAPQ6ZRS2 3230 aa12.07□□□□□ -0.48
PTPRU-205ENST00000460170 FNDC10F2Z333 226 aa12.07□□□□□ -0.48
PTPRU-205ENST00000460170 PYY3Q5JQD4 70 aa12.07□□□□□ -0.48
PTPRU-205ENST00000460170 CRIM1Q9NZV1 1036 aa12.07□□□□□ -0.48
PTPRU-205ENST00000460170 CREBBPQ92793 2442 aa12.07□□□□□ -0.48
PTPRU-205ENST00000460170 ABCA4P78363 2273 aa12.07□□□□□ -0.48
PTPRU-205ENST00000460170 A0A1B0GWJ7 208 aa12.07□□□□□ -0.48
PTPRU-205ENST00000460170 ACTL10Q5JWF8 245 aa12.07□□□□□ -0.48
PTPRU-205ENST00000460170 PPP1R17O96001 155 aa12.07□□□□□ -0.48
PTPRU-205ENST00000460170 IGHV3-11P01762 117 aa12.07□□□□□ -0.48
PTPRU-205ENST00000460170 PMS2P5A8MQ11 134 aa12.06□□□□□ -0.48
PTPRU-205ENST00000460170 DUX5Q96PT3 197 aa12.06□□□□□ -0.48
PTPRU-205ENST00000460170 LAMTOR2Q9Y2Q5 125 aa12.06□□□□□ -0.48
PTPRU-205ENST00000460170 SHANK1Q9Y566 2161 aa12.06□□□□□ -0.48
PTPRU-205ENST00000460170 IGHV3OR16-12A0A075B7B8 117 aa12.06□□□□□ -0.48
PTPRU-205ENST00000460170 TRAV8-6A0A0B4J262 113 aa12.06□□□□□ -0.48
PTPRU-205ENST00000460170 SNAI2O43623 268 aa12.06□□□□□ -0.48
PTPRU-205ENST00000460170 TPTE2P1Q5T6R2 138 aa12.06□□□□□ -0.48
PTPRU-205ENST00000460170 SLC25A39Q9BZJ4 359 aaPredicted RBP12.06□□□□□ -0.48
PTPRU-205ENST00000460170 SCRT1Q9BWW7 348 aa12.06□□□□□ -0.48
PTPRU-205ENST00000460170 DOCK10Q96BY6 2186 aa12.06□□□□□ -0.48
PTPRU-205ENST00000460170 PLP1P60201 277 aa12.05□□□□□ -0.48
PTPRU-205ENST00000460170 MLANAQ16655 118 aa12.05□□□□□ -0.48
PTPRU-205ENST00000460170 TRAV9-2A0A087WT02 112 aa12.05□□□□□ -0.48
PTPRU-205ENST00000460170 CEACAM4O75871 244 aa12.05□□□□□ -0.48
PTPRU-205ENST00000460170 LYPD2Q6UXB3 125 aa12.05□□□□□ -0.48
PTPRU-205ENST00000460170 TMEM256Q8N2U0 113 aa12.05□□□□□ -0.48
PTPRU-205ENST00000460170 PEF1Q9UBV8 284 aaKnown RBP12.05□□□□□ -0.48
PTPRU-205ENST00000460170 SIGLEC9Q9Y336 463 aa12.05□□□□□ -0.48
PTPRU-205ENST00000460170 TCRAP04437 139 aa12.05□□□□□ -0.48
PTPRU-205ENST00000460170 LGALS3P17931 250 aaKnown RBP12.05□□□□□ -0.48
PTPRU-205ENST00000460170 PSMG4Q5JS54 123 aa12.05□□□□□ -0.48
PTPRU-205ENST00000460170 NIT1Q86X76 327 aa12.05□□□□□ -0.48
PTPRU-205ENST00000460170 C10orf91Q5T1B1 145 aa12.05□□□□□ -0.48
PTPRU-205ENST00000460170 FAM71F2Q6NXP2 309 aa12.04□□□□□ -0.48
PTPRU-205ENST00000460170 EXOC3-AS1Q8N2X6 119 aa12.04□□□□□ -0.48
PTPRU-205ENST00000460170 TMEM190Q8WZ59 177 aa12.04□□□□□ -0.48
PTPRU-205ENST00000460170 FOXC2Q99958 501 aa12.04□□□□□ -0.48
PTPRU-205ENST00000460170 PAPPA-AS1Q5QFB9 102 aa12.04□□□□□ -0.48
PTPRU-205ENST00000460170 OR5AN1Q8NGI8 311 aa12.04□□□□□ -0.48
PTPRU-205ENST00000460170 BUB1B-PAK6H3BSN5 160 aa12.04□□□□□ -0.48
PTPRU-205ENST00000460170 ABCA1O95477 2261 aa12.04□□□□□ -0.48
PTPRU-205ENST00000460170 DKK1O94907 266 aa12.04□□□□□ -0.48
PTPRU-205ENST00000460170 PRSS2P07478 247 aa12.03□□□□□ -0.48
PTPRU-205ENST00000460170 DOCK11Q5JSL3 2073 aa12.03□□□□□ -0.48
PTPRU-205ENST00000460170 AMMECR1LQ6DCA0 310 aa12.03□□□□□ -0.48
PTPRU-205ENST00000460170 RASL11AQ6T310 242 aa12.03□□□□□ -0.48
PTPRU-205ENST00000460170 KIR3DL3Q8N743 410 aa12.03□□□□□ -0.48
PTPRU-205ENST00000460170 ST6GALNAC3Q8NDV1 305 aa12.03□□□□□ -0.48
PTPRU-205ENST00000460170 Q8NFD4 153 aa12.03□□□□□ -0.48
PTPRU-205ENST00000460170 SCGB3A1Q96QR1 104 aa12.03□□□□□ -0.48
PTPRU-205ENST00000460170 KIAA1671Q9BY89 1806 aa12.03□□□□□ -0.48
PTPRU-205ENST00000460170 OOSP1A8MZH6 123 aa12.03□□□□□ -0.48
PTPRU-205ENST00000460170 TNFSF13O75888 250 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms