RNA–Protein interactions for RNA: ENST00000460168.1

HERC4-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,215 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-207ENST00000460168 BRWD1-AS2P59051 145 aa8.4□□□□□ -1.06
HERC4-207ENST00000460168 YPEL3P61236 119 aaPredicted RBP8.4□□□□□ -1.06
HERC4-207ENST00000460168 LCN2P80188 198 aa8.4□□□□□ -1.06
HERC4-207ENST00000460168 TMEM78Q5T7P6 136 aa8.4□□□□□ -1.06
HERC4-207ENST00000460168 SP5Q6BEB4 398 aaPredicted RBP8.4□□□□□ -1.06
HERC4-207ENST00000460168 OR9G4Q8NGQ1 327 aa8.4□□□□□ -1.06
HERC4-207ENST00000460168 GRAMD2BQ96HH9 432 aa8.4□□□□□ -1.06
HERC4-207ENST00000460168 SMIM3Q9BZL3 60 aa8.4□□□□□ -1.06
HERC4-207ENST00000460168 CACNG5Q9UF02 275 aa8.4□□□□□ -1.06
HERC4-207ENST00000460168 TRAV8-6A0A0B4J262 113 aa8.39□□□□□ -1.07
HERC4-207ENST00000460168 IGHV4-39P01824 125 aa8.39□□□□□ -1.07
HERC4-207ENST00000460168 SLC25A6P12236 298 aa8.39□□□□□ -1.07
HERC4-207ENST00000460168 CNN1P51911 297 aaKnown RBP8.39□□□□□ -1.07
HERC4-207ENST00000460168 TPPP2P59282 170 aa8.39□□□□□ -1.07
HERC4-207ENST00000460168 RPL8P62917 257 aaKnown RBP8.39□□□□□ -1.07
HERC4-207ENST00000460168 CXorf66Q5JRM2 361 aaPredicted RBP8.39□□□□□ -1.07
HERC4-207ENST00000460168 DPPA3Q6W0C5 159 aa8.39□□□□□ -1.07
HERC4-207ENST00000460168 RBPMS2Q6ZRY4 209 aaKnown RBP8.39□□□□□ -1.07
HERC4-207ENST00000460168 C1orf229Q6ZS94 237 aaPredicted RBP8.39□□□□□ -1.07
HERC4-207ENST00000460168 OR4F5Q8NH21 305 aa8.39□□□□□ -1.07
HERC4-207ENST00000460168 AQP10Q96PS8 301 aa8.39□□□□□ -1.07
HERC4-207ENST00000460168 ANAPC13Q9BS18 74 aa8.39□□□□□ -1.07
HERC4-207ENST00000460168 MCRIP2Q9BUT9 160 aaKnown RBP8.39□□□□□ -1.07
HERC4-207ENST00000460168 C1QTNF4Q9BXJ3 329 aa8.39□□□□□ -1.07
HERC4-207ENST00000460168 NAT8BQ9UHF3 227 aa8.39□□□□□ -1.07
HERC4-207ENST00000460168 NSG2Q9Y328 171 aa8.39□□□□□ -1.07
HERC4-207ENST00000460168 MSGN1A6NI15 193 aa8.39□□□□□ -1.07
HERC4-207ENST00000460168 SSSCA1O60232 199 aa8.39□□□□□ -1.07
HERC4-207ENST00000460168 THBS3P49746 956 aa8.39□□□□□ -1.07
HERC4-207ENST00000460168 PNRC1Q12796 327 aaPredicted RBP8.39□□□□□ -1.07
HERC4-207ENST00000460168 Q6ZRM9 215 aa8.39□□□□□ -1.07
HERC4-207ENST00000460168 ABHD12Q8N2K0 398 aa8.39□□□□□ -1.07
HERC4-207ENST00000460168 OR5A1Q8NGJ0 315 aa8.39□□□□□ -1.07
HERC4-207ENST00000460168 OR9G1Q8NH87 305 aa8.39□□□□□ -1.07
HERC4-207ENST00000460168 C8orf46Q8TAG6 207 aa8.39□□□□□ -1.07
HERC4-207ENST00000460168 ADTRPQ96IZ2 230 aa8.39□□□□□ -1.07
HERC4-207ENST00000460168 BPESC1Q9GZL8 116 aa8.39□□□□□ -1.07
HERC4-207ENST00000460168 TMEM133Q9H2Q1 129 aa8.39□□□□□ -1.07
HERC4-207ENST00000460168 RCL1Q9Y2P8 373 aaKnown RBP8.39□□□□□ -1.07
HERC4-207ENST00000460168 SIGLEC9Q9Y336 463 aa8.39□□□□□ -1.07
HERC4-207ENST00000460168 MAP1LC3B2A6NCE7 125 aa8.38□□□□□ -1.07
HERC4-207ENST00000460168 K7EP34 96 aa8.38□□□□□ -1.07
HERC4-207ENST00000460168 RPL12P30050 165 aaKnown RBP8.38□□□□□ -1.07
HERC4-207ENST00000460168 KIR2DS2P43631 304 aa8.38□□□□□ -1.07
HERC4-207ENST00000460168 PSG5Q15238 335 aa8.38□□□□□ -1.07
HERC4-207ENST00000460168 FAM162BQ5T6X4 162 aa8.38□□□□□ -1.07
HERC4-207ENST00000460168 H2BFWTQ7Z2G1 175 aa8.38□□□□□ -1.07
HERC4-207ENST00000460168 IGFBPL1Q8WX77 278 aa8.38□□□□□ -1.07
HERC4-207ENST00000460168 MBD6Q96DN6 1003 aa8.38□□□□□ -1.07
HERC4-207ENST00000460168 NIPSNAP3BQ9BS92 247 aa8.38□□□□□ -1.07
HERC4-207ENST00000460168 MAP1LC3BQ9GZQ8 125 aa8.38□□□□□ -1.07
HERC4-207ENST00000460168 PLA2G2EQ9NZK7 142 aa8.38□□□□□ -1.07
HERC4-207ENST00000460168 NPIPB5A8MRT5 1133 aa8.38□□□□□ -1.07
HERC4-207ENST00000460168 RBP4P02753 201 aa8.38□□□□□ -1.07
HERC4-207ENST00000460168 GAPDHP04406 335 aaKnown RBP8.38□□□□□ -1.07
HERC4-207ENST00000460168 ID3Q02535 119 aa8.38□□□□□ -1.07
HERC4-207ENST00000460168 MRPL23Q16540 153 aaKnown RBP8.38□□□□□ -1.07
HERC4-207ENST00000460168 Q8N976 141 aa8.38□□□□□ -1.07
HERC4-207ENST00000460168 C8orf31Q8N9H6 132 aa8.38□□□□□ -1.07
HERC4-207ENST00000460168 OR5AU1Q8NGC0 362 aa8.38□□□□□ -1.07
HERC4-207ENST00000460168 KIR2DL5BQ8NHK3 375 aa8.38□□□□□ -1.07
HERC4-207ENST00000460168 DDB2Q92466 427 aa8.38□□□□□ -1.07
HERC4-207ENST00000460168 DNAJC30Q96LL9 226 aa8.38□□□□□ -1.07
HERC4-207ENST00000460168 SPG11Q96JI7 2443 aa8.37□□□□□ -1.07
HERC4-207ENST00000460168 FABP5P3A8MUU1 101 aa8.37□□□□□ -1.07
HERC4-207ENST00000460168 PITX3O75364 302 aa8.37□□□□□ -1.07
HERC4-207ENST00000460168 HIST1H1EP10412 219 aaKnown RBP8.37□□□□□ -1.07
HERC4-207ENST00000460168 DLX1P56177 255 aa8.37□□□□□ -1.07
HERC4-207ENST00000460168 ERVK-16P61578 105 aa8.37□□□□□ -1.07
HERC4-207ENST00000460168 PRB3Q04118 309 aaPredicted RBP8.37□□□□□ -1.07
HERC4-207ENST00000460168 SPSB3Q6PJ21 355 aa8.37□□□□□ -1.07
HERC4-207ENST00000460168 ZNF833PQ6ZTB9 187 aa8.37□□□□□ -1.07
HERC4-207ENST00000460168 LINC00311Q8N616 119 aa8.37□□□□□ -1.07
HERC4-207ENST00000460168 LY6G5BQ8NDX9 201 aa8.37□□□□□ -1.07
HERC4-207ENST00000460168 OR4A5Q8NH83 315 aa8.37□□□□□ -1.07
HERC4-207ENST00000460168 SERTAD4Q9NUC0 356 aa8.37□□□□□ -1.07
HERC4-207ENST00000460168 WSB1Q9Y6I7 421 aa8.37□□□□□ -1.07
HERC4-207ENST00000460168 CT45A6P0DMU7 189 aa8.37□□□□□ -1.07
HERC4-207ENST00000460168 CT45A5P0DMU8 189 aa8.37□□□□□ -1.07
HERC4-207ENST00000460168 CT45A7P0DMV0 189 aa8.37□□□□□ -1.07
HERC4-207ENST00000460168 P2RY1P47900 373 aa8.37□□□□□ -1.07
HERC4-207ENST00000460168 REG1BP48304 166 aa8.37□□□□□ -1.07
HERC4-207ENST00000460168 RTL8BQ17RB0 113 aa8.37□□□□□ -1.07
HERC4-207ENST00000460168 LCNL1Q6ZST4 164 aa8.37□□□□□ -1.07
HERC4-207ENST00000460168 FAM168AQ92567 244 aa8.37□□□□□ -1.07
HERC4-207ENST00000460168 CLEC7AQ9BXN2 247 aa8.37□□□□□ -1.07
HERC4-207ENST00000460168 ARHGAP32A7KAX9 2087 aa8.36□□□□□ -1.07
HERC4-207ENST00000460168 TEX48A0A1B0GUV7 120 aa8.36□□□□□ -1.07
HERC4-207ENST00000460168 GAGE12JA6NER3 117 aa8.36□□□□□ -1.07
HERC4-207ENST00000460168 RS1O15537 224 aa8.36□□□□□ -1.07
HERC4-207ENST00000460168 CHST1O43916 411 aa8.36□□□□□ -1.07
HERC4-207ENST00000460168 GAGE7O76087 117 aa8.36□□□□□ -1.07
HERC4-207ENST00000460168 GAGE12FP0CL80 117 aa8.36□□□□□ -1.07
HERC4-207ENST00000460168 GAGE12GP0CL81 117 aa8.36□□□□□ -1.07
HERC4-207ENST00000460168 GAGE12IP0CL82 117 aa8.36□□□□□ -1.07
HERC4-207ENST00000460168 PRTN3P24158 256 aa8.36□□□□□ -1.07
HERC4-207ENST00000460168 COX7A1P24310 79 aa8.36□□□□□ -1.07
HERC4-207ENST00000460168 NPY1RP25929 384 aa8.36□□□□□ -1.07
HERC4-207ENST00000460168 IL3RAP26951 378 aa8.36□□□□□ -1.07
HERC4-207ENST00000460168 RHOBP62745 196 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms