RNA–Protein interactions for RNA: ENST00000460158.1

VPS8-215, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 366 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-215ENST00000460158 GINS4Q9BRT9 223 aa2.22□□□□□ -2.05
VPS8-215ENST00000460158 SHANK2-AS3Q9BTD1 123 aa2.22□□□□□ -2.05
VPS8-215ENST00000460158 CHAC1Q9BUX1 264 aa2.22□□□□□ -2.05
VPS8-215ENST00000460158 TSSK6Q9BXA6 273 aa2.22□□□□□ -2.05
VPS8-215ENST00000460158 SNHG12Q9BXW3 62 aa2.22□□□□□ -2.05
VPS8-215ENST00000460158 LHX9Q9NQ69 397 aa2.22□□□□□ -2.05
VPS8-215ENST00000460158 C8orf17Q9NRJ1 99 aa2.22□□□□□ -2.05
VPS8-215ENST00000460158 TNS2Q63HR2 1409 aa2.22□□□□□ -2.05
VPS8-215ENST00000460158 PTPRSQ13332 1948 aa2.22□□□□□ -2.05
VPS8-215ENST00000460158 NUP214P35658 2090 aaPredicted RBP2.22□□□□□ -2.05
VPS8-215ENST00000460158 ANKRD12Q6UB98 2062 aa2.22□□□□□ -2.05
VPS8-215ENST00000460158 SCN1AP35498 2009 aa2.22□□□□□ -2.05
VPS8-215ENST00000460158 MYLKQ15746 1914 aa2.21□□□□□ -2.06
VPS8-215ENST00000460158 ALPK3Q96L96 1907 aa2.21□□□□□ -2.06
VPS8-215ENST00000460158 A0A087X0T9 212 aa2.21□□□□□ -2.06
VPS8-215ENST00000460158 IGHV3-49A0A0A0MS15 119 aa2.21□□□□□ -2.06
VPS8-215ENST00000460158 A0A0G2JMM0 328 aa2.21□□□□□ -2.06
VPS8-215ENST00000460158 IGHV5-10-1A0A0J9YXX1 117 aa2.21□□□□□ -2.06
VPS8-215ENST00000460158 A0A1W2PPB8 328 aa2.21□□□□□ -2.06
VPS8-215ENST00000460158 C7orf71A4D174 169 aa2.21□□□□□ -2.06
VPS8-215ENST00000460158 OR2T8A6NH00 312 aa2.21□□□□□ -2.06
VPS8-215ENST00000460158 KIR3DP1A8MWS1 328 aa2.21□□□□□ -2.06
VPS8-215ENST00000460158 FNDC10F2Z333 226 aa2.21□□□□□ -2.06
VPS8-215ENST00000460158 H0YJW9 148 aa2.21□□□□□ -2.06
VPS8-215ENST00000460158 H3BMG7 143 aa2.21□□□□□ -2.06
VPS8-215ENST00000460158 UBFD1O14562 309 aaKnown RBP2.21□□□□□ -2.06
VPS8-215ENST00000460158 CDC42EP2O14613 210 aa2.21□□□□□ -2.06
VPS8-215ENST00000460158 KDM6AO15550 1401 aaPredicted RBP2.21□□□□□ -2.06
VPS8-215ENST00000460158 ZNF324O75467 553 aaPredicted RBP2.21□□□□□ -2.06
VPS8-215ENST00000460158 APCSP02743 223 aa2.21□□□□□ -2.06
VPS8-215ENST00000460158 CXCL1P09341 107 aa2.21□□□□□ -2.06
VPS8-215ENST00000460158 CRYGSP22914 178 aa2.21□□□□□ -2.06
VPS8-215ENST00000460158 PSMB8P28062 276 aa2.21□□□□□ -2.06
VPS8-215ENST00000460158 ZNF136P52737 540 aa2.21□□□□□ -2.06
VPS8-215ENST00000460158 HIST1H4AP62805 103 aaKnown RBP2.21□□□□□ -2.06
VPS8-215ENST00000460158 PLGLB1Q02325 96 aa2.21□□□□□ -2.06
VPS8-215ENST00000460158 HSD52Q0P140 79 aa2.21□□□□□ -2.06
VPS8-215ENST00000460158 SP6Q3SY56 376 aa2.21□□□□□ -2.06
VPS8-215ENST00000460158 LUZP6Q538Z0 58 aa2.21□□□□□ -2.06
VPS8-215ENST00000460158 ZNF880Q6PDB4 577 aa2.21□□□□□ -2.06
VPS8-215ENST00000460158 ZNF767PQ75MW2 155 aa2.21□□□□□ -2.06
VPS8-215ENST00000460158 GKN2Q86XP6 184 aa2.21□□□□□ -2.06
VPS8-215ENST00000460158 SUMF2Q8NBJ7 301 aa2.21□□□□□ -2.06
VPS8-215ENST00000460158 OR8D4Q8NGM9 314 aa2.21□□□□□ -2.06
VPS8-215ENST00000460158 STAG3L4Q8TBR4 150 aa2.21□□□□□ -2.06
VPS8-215ENST00000460158 ZC2HC1AQ96GY0 325 aa2.21□□□□□ -2.06
VPS8-215ENST00000460158 CIB3Q96Q77 187 aaPredicted RBP2.21□□□□□ -2.06
VPS8-215ENST00000460158 MIEN1Q9BRT3 115 aa2.21□□□□□ -2.06
VPS8-215ENST00000460158 DERL1Q9BUN8 251 aa2.21□□□□□ -2.06
VPS8-215ENST00000460158 DUSP21Q9H596 190 aa2.21□□□□□ -2.06
VPS8-215ENST00000460158 TAS2R8Q9NYW2 309 aa2.21□□□□□ -2.06
VPS8-215ENST00000460158 METTL1Q9UBP6 276 aaKnown RBP2.21□□□□□ -2.06
VPS8-215ENST00000460158 SNX12Q9UMY4 172 aa2.21□□□□□ -2.06
VPS8-215ENST00000460158 RNF11Q9Y3C5 154 aa2.21□□□□□ -2.06
VPS8-215ENST00000460158 MAPKBP1O60336 1514 aa2.21□□□□□ -2.06
VPS8-215ENST00000460158 NACAE9PAV3 2078 aa2.21□□□□□ -2.06
VPS8-215ENST00000460158 GREB1Q4ZG55 1949 aa2.21□□□□□ -2.06
VPS8-215ENST00000460158 MED14O60244 1454 aa2.2□□□□□ -2.06
VPS8-215ENST00000460158 MAGI1Q96QZ7 1491 aaPredicted RBP2.2□□□□□ -2.06
VPS8-215ENST00000460158 ARHGAP35Q9NRY4 1499 aa2.2□□□□□ -2.06
VPS8-215ENST00000460158 KIF26AQ9ULI4 1882 aaPredicted RBP2.2□□□□□ -2.06
VPS8-215ENST00000460158 POLEQ07864 2286 aa2.2□□□□□ -2.06
VPS8-215ENST00000460158 NSD3Q9BZ95 1437 aa2.2□□□□□ -2.06
VPS8-215ENST00000460158 PARP14Q460N5 1801 aa2.2□□□□□ -2.06
VPS8-215ENST00000460158 TRAV27A0A087WT01 109 aa2.2□□□□□ -2.06
VPS8-215ENST00000460158 FAM236AA0A1B0GUQ0 79 aa2.2□□□□□ -2.06
VPS8-215ENST00000460158 FAM236BA0A1B0GV22 79 aa2.2□□□□□ -2.06
VPS8-215ENST00000460158 A0A1W2PP18 115 aa2.2□□□□□ -2.06
VPS8-215ENST00000460158 LEUTXA8MZ59 168 aa2.2□□□□□ -2.06
VPS8-215ENST00000460158 BUB1B-PAK6H3BSN5 160 aa2.2□□□□□ -2.06
VPS8-215ENST00000460158 SOCS1O15524 211 aa2.2□□□□□ -2.06
VPS8-215ENST00000460158 HIST1H2BKO60814 126 aa2.2□□□□□ -2.06
VPS8-215ENST00000460158 KRASP01116 189 aa2.2□□□□□ -2.06
VPS8-215ENST00000460158 INSP01308 110 aa2.2□□□□□ -2.06
VPS8-215ENST00000460158 HIST1H2BJP06899 126 aa2.2□□□□□ -2.06
VPS8-215ENST00000460158 IGHV1-8P0DP01 117 aa2.2□□□□□ -2.06
VPS8-215ENST00000460158 CRHBPP24387 322 aa2.2□□□□□ -2.06
VPS8-215ENST00000460158 RPL27AP46776 148 aaKnown RBP2.2□□□□□ -2.06
VPS8-215ENST00000460158 DYNLT3P51808 116 aa2.2□□□□□ -2.06
VPS8-215ENST00000460158 FOXA3P55318 350 aaPredicted RBP2.2□□□□□ -2.06
VPS8-215ENST00000460158 ARPP19P56211 112 aa2.2□□□□□ -2.06
VPS8-215ENST00000460158 CMC4P56277 68 aaPredicted RBP2.2□□□□□ -2.06
VPS8-215ENST00000460158 HBBP68871 147 aa2.2□□□□□ -2.06
VPS8-215ENST00000460158 RNASE13Q5GAN3 156 aaKnown RBP2.2□□□□□ -2.06
VPS8-215ENST00000460158 IZUMO2Q6UXV1 221 aa2.2□□□□□ -2.06
VPS8-215ENST00000460158 AMN1Q8IY45 258 aa2.2□□□□□ -2.06
VPS8-215ENST00000460158 ZNF101Q8IZC7 436 aa2.2□□□□□ -2.06
VPS8-215ENST00000460158 C3orf22Q8N5N4 141 aa2.2□□□□□ -2.06
VPS8-215ENST00000460158 OR5D16Q8NGK9 328 aa2.2□□□□□ -2.06
VPS8-215ENST00000460158 COPS9Q8WXC6 57 aa2.2□□□□□ -2.06
VPS8-215ENST00000460158 RNASE6Q93091 150 aaKnown RBP2.2□□□□□ -2.06
VPS8-215ENST00000460158 LINC00167Q96N53 147 aa2.2□□□□□ -2.06
VPS8-215ENST00000460158 CHCHD7Q9BUK0 85 aa2.2□□□□□ -2.06
VPS8-215ENST00000460158 MRPL32Q9BYC8 188 aaKnown RBP2.2□□□□□ -2.06
VPS8-215ENST00000460158 PLA2G12AQ9BZM1 189 aa2.2□□□□□ -2.06
VPS8-215ENST00000460158 TMEM133Q9H2Q1 129 aa2.2□□□□□ -2.06
VPS8-215ENST00000460158 PHLDA3Q9Y5J5 127 aa2.2□□□□□ -2.06
VPS8-215ENST00000460158 GPATCH8Q9UKJ3 1502 aaKnown RBP2.2□□□□□ -2.06
VPS8-215ENST00000460158 CARMIL3Q8ND23 1372 aa2.2□□□□□ -2.06
VPS8-215ENST00000460158 LTBP1Q14766 1721 aa2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms