RNA–Protein interactions for RNA: ENST00000460110.5

NUDCD3-203, Transcript of NudC domain containing 3, humanhuman

TSL 1 (best)

Gene NUDCD3, Length 3,641 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-203ENST00000460110 SMAD7O15105 426 aaKnown RBP7.46□□□□□ -1.22
NUDCD3-203ENST00000460110 ZNF207O43670 478 aaKnown RBP7.46□□□□□ -1.22
NUDCD3-203ENST00000460110 C8orf88P0DMB2 117 aa7.46□□□□□ -1.22
NUDCD3-203ENST00000460110 TCL1AP56279 114 aa7.46□□□□□ -1.22
NUDCD3-203ENST00000460110 RAB4BP61018 213 aa7.46□□□□□ -1.22
NUDCD3-203ENST00000460110 FAM90A2PQ658T7 463 aa7.46□□□□□ -1.22
NUDCD3-203ENST00000460110 SPOCK3Q9BQ16 436 aa7.46□□□□□ -1.22
NUDCD3-203ENST00000460110 C1RLQ9NZP8 487 aa7.46□□□□□ -1.22
NUDCD3-203ENST00000460110 YTHDF2Q9Y5A9 579 aaKnown RBP7.46□□□□□ -1.22
NUDCD3-203ENST00000460110 OR2T8A6NH00 312 aa7.46□□□□□ -1.22
NUDCD3-203ENST00000460110 HYPMO75409 117 aa7.46□□□□□ -1.22
NUDCD3-203ENST00000460110 IL4P05112 153 aa7.46□□□□□ -1.22
NUDCD3-203ENST00000460110 OR4A5Q8NH83 315 aa7.46□□□□□ -1.22
NUDCD3-203ENST00000460110 TBX15Q96SF7 602 aa7.46□□□□□ -1.22
NUDCD3-203ENST00000460110 NAT8Q9UHE5 227 aa7.46□□□□□ -1.22
NUDCD3-203ENST00000460110 ITPR3Q14573 2671 aa7.46□□□□□ -1.22
NUDCD3-203ENST00000460110 FLNAP21333 2647 aaKnown RBP7.45□□□□□ -1.22
NUDCD3-203ENST00000460110 TEX15Q9BXT5 2789 aa7.45□□□□□ -1.22
NUDCD3-203ENST00000460110 TRAV1-1A0A0B4J248 108 aa7.45□□□□□ -1.22
NUDCD3-203ENST00000460110 NPFFO15130 113 aa7.45□□□□□ -1.22
NUDCD3-203ENST00000460110 SLC25A5P05141 298 aaKnown RBP7.45□□□□□ -1.22
NUDCD3-203ENST00000460110 STAG3L2P0CL84 134 aa7.45□□□□□ -1.22
NUDCD3-203ENST00000460110 STAG3L3P0CL85 134 aa7.45□□□□□ -1.22
NUDCD3-203ENST00000460110 ZNF25P17030 456 aaPredicted RBP7.45□□□□□ -1.22
NUDCD3-203ENST00000460110 FCGR2BP31994 310 aaPredicted RBP7.45□□□□□ -1.22
NUDCD3-203ENST00000460110 MFAP2P55001 183 aa7.45□□□□□ -1.22
NUDCD3-203ENST00000460110 PKIAP61925 76 aa7.45□□□□□ -1.22
NUDCD3-203ENST00000460110 OR5I1Q13606 314 aa7.45□□□□□ -1.22
NUDCD3-203ENST00000460110 C16orf82Q7Z2V1 217 aa7.45□□□□□ -1.22
NUDCD3-203ENST00000460110 LY6G5BQ8NDX9 201 aa7.45□□□□□ -1.22
NUDCD3-203ENST00000460110 CACNG8Q8WXS5 425 aa7.45□□□□□ -1.22
NUDCD3-203ENST00000460110 LINC00479Q96M42 142 aa7.45□□□□□ -1.22
NUDCD3-203ENST00000460110 CLDN34H7C241 214 aa7.45□□□□□ -1.22
NUDCD3-203ENST00000460110 IGHV4-38-2P0DP08 117 aa7.45□□□□□ -1.22
NUDCD3-203ENST00000460110 PSG1P11464 419 aa7.45□□□□□ -1.22
NUDCD3-203ENST00000460110 FOLR2P14207 255 aa7.45□□□□□ -1.22
NUDCD3-203ENST00000460110 ERVFC1-1P60608 527 aa7.45□□□□□ -1.22
NUDCD3-203ENST00000460110 RNASEH2CQ8TDP1 164 aaKnown RBP7.45□□□□□ -1.22
NUDCD3-203ENST00000460110 ASCL2Q99929 193 aa7.45□□□□□ -1.22
NUDCD3-203ENST00000460110 GPR61Q9BZJ8 451 aa7.45□□□□□ -1.22
NUDCD3-203ENST00000460110 LSM4Q9Y4Z0 139 aaKnown RBP7.45□□□□□ -1.22
NUDCD3-203ENST00000460110 KRTAP10-9P60411 292 aa7.45□□□□□ -1.22
NUDCD3-203ENST00000460110 FAM71F2Q6NXP2 309 aa7.45□□□□□ -1.22
NUDCD3-203ENST00000460110 PIP4P2Q8N4L2 257 aa7.45□□□□□ -1.22
NUDCD3-203ENST00000460110 OR11H6Q8NGC7 330 aa7.45□□□□□ -1.22
NUDCD3-203ENST00000460110 C1orf159Q96HA4 380 aa7.45□□□□□ -1.22
NUDCD3-203ENST00000460110 ELOVL1Q9BW60 279 aa7.45□□□□□ -1.22
NUDCD3-203ENST00000460110 F11RQ9Y624 299 aaKnown RBP7.45□□□□□ -1.22
NUDCD3-203ENST00000460110 FN1P02751 2386 aaKnown RBP7.45□□□□□ -1.22
NUDCD3-203ENST00000460110 CDX1P47902 265 aaPredicted RBP7.44□□□□□ -1.22
NUDCD3-203ENST00000460110 GNG5P63218 68 aa7.44□□□□□ -1.22
NUDCD3-203ENST00000460110 OR1L4Q8NGR5 311 aa7.44□□□□□ -1.22
NUDCD3-203ENST00000460110 ITPR2Q14571 2701 aa7.44□□□□□ -1.22
NUDCD3-203ENST00000460110 CSMD2Q7Z408 3487 aa7.44□□□□□ -1.22
NUDCD3-203ENST00000460110 TCRBV4S1A1TA0A5B7 111 aa7.44□□□□□ -1.22
NUDCD3-203ENST00000460110 PGPA6NDG6 321 aa7.44□□□□□ -1.22
NUDCD3-203ENST00000460110 HELTA6NFD8 242 aa7.44□□□□□ -1.22
NUDCD3-203ENST00000460110 PRSS46E5RG02 174 aa7.44□□□□□ -1.22
NUDCD3-203ENST00000460110 HIST1H1BP16401 226 aaKnown RBP7.44□□□□□ -1.22
NUDCD3-203ENST00000460110 GPR183P32249 361 aa7.44□□□□□ -1.22
NUDCD3-203ENST00000460110 GALR1P47211 349 aa7.44□□□□□ -1.22
NUDCD3-203ENST00000460110 ZNF137PP52743 207 aa7.44□□□□□ -1.22
NUDCD3-203ENST00000460110 NDPQ00604 133 aa7.44□□□□□ -1.22
NUDCD3-203ENST00000460110 VWC2Q2TAL6 325 aa7.44□□□□□ -1.22
NUDCD3-203ENST00000460110 PQLC2Q6ZP29 291 aa7.44□□□□□ -1.22
NUDCD3-203ENST00000460110 OR1P1Q8NH06 330 aa7.44□□□□□ -1.22
NUDCD3-203ENST00000460110 SMDT1Q9H4I9 107 aa7.44□□□□□ -1.22
NUDCD3-203ENST00000460110 LINC01548A6NM66 108 aa7.44□□□□□ -1.22
NUDCD3-203ENST00000460110 H3BUX3 64 aa7.44□□□□□ -1.22
NUDCD3-203ENST00000460110 IGHV3-11P01762 117 aa7.44□□□□□ -1.22
NUDCD3-203ENST00000460110 GNG4P50150 75 aa7.44□□□□□ -1.22
NUDCD3-203ENST00000460110 RPL23P62829 140 aaKnown RBP7.44□□□□□ -1.22
NUDCD3-203ENST00000460110 RPL11P62913 178 aaKnown RBP7.44□□□□□ -1.22
NUDCD3-203ENST00000460110 PRR31Q5SQ13 230 aa7.44□□□□□ -1.22
NUDCD3-203ENST00000460110 LCNL1Q6ZST4 164 aa7.44□□□□□ -1.22
NUDCD3-203ENST00000460110 CMTM2Q8TAZ6 248 aa7.44□□□□□ -1.22
NUDCD3-203ENST00000460110 SDF2L1Q9HCN8 221 aa7.44□□□□□ -1.22
NUDCD3-203ENST00000460110 TMEM167BQ9NRX6 74 aa7.44□□□□□ -1.22
NUDCD3-203ENST00000460110 FBXL7Q9UJT9 491 aa7.44□□□□□ -1.22
NUDCD3-203ENST00000460110 CENPVL3A0A0U1RRI6 287 aa7.43□□□□□ -1.22
NUDCD3-203ENST00000460110 SLC17A3O00476 420 aa7.43□□□□□ -1.22
NUDCD3-203ENST00000460110 UBE2E1P51965 193 aa7.43□□□□□ -1.22
NUDCD3-203ENST00000460110 C8orf31Q8N9H6 132 aa7.43□□□□□ -1.22
NUDCD3-203ENST00000460110 C8orf46Q8TAG6 207 aa7.43□□□□□ -1.22
NUDCD3-203ENST00000460110 FAM210BQ96KR6 192 aa7.43□□□□□ -1.22
NUDCD3-203ENST00000460110 HIGD1AQ9Y241 93 aa7.43□□□□□ -1.22
NUDCD3-203ENST00000460110 ZNF320A2RRD8 509 aa7.43□□□□□ -1.22
NUDCD3-203ENST00000460110 UBE2G1P62253 170 aa7.43□□□□□ -1.22
NUDCD3-203ENST00000460110 SELENOTP62341 195 aa7.43□□□□□ -1.22
NUDCD3-203ENST00000460110 Q8WTZ3 238 aa7.43□□□□□ -1.22
NUDCD3-203ENST00000460110 THYN1Q9P016 225 aa7.43□□□□□ -1.22
NUDCD3-203ENST00000460110 PDE6DO43924 150 aa7.42□□□□□ -1.22
NUDCD3-203ENST00000460110 TRGC2P03986 189 aa7.42□□□□□ -1.22
NUDCD3-203ENST00000460110 CXCL1P09341 107 aa7.42□□□□□ -1.22
NUDCD3-203ENST00000460110 NPPCP23582 126 aa7.42□□□□□ -1.22
NUDCD3-203ENST00000460110 PRR20EP86478 221 aa7.42□□□□□ -1.22
NUDCD3-203ENST00000460110 PRR20CP86479 221 aa7.42□□□□□ -1.22
NUDCD3-203ENST00000460110 PRR20DP86480 221 aa7.42□□□□□ -1.22
NUDCD3-203ENST00000460110 PRR20BP86481 221 aa7.42□□□□□ -1.22
NUDCD3-203ENST00000460110 PRR20AP86496 221 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms