RNA–Protein interactions for RNA: ENST00000459788.1

HDLBP-228, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-228ENST00000459788 RARRES2Q99969 163 aa7.34□□□□□ -1.23
HDLBP-228ENST00000459788 RBKSQ9H477 322 aa7.34□□□□□ -1.23
HDLBP-228ENST00000459788 FBXL17Q9UF56 701 aa7.34□□□□□ -1.23
HDLBP-228ENST00000459788 RABAC1Q9UI14 185 aa7.34□□□□□ -1.23
HDLBP-228ENST00000459788 IGKV3-7A0A075B6H7 116 aa7.33□□□□□ -1.24
HDLBP-228ENST00000459788 CXorf65A6NEN9 183 aa7.33□□□□□ -1.24
HDLBP-228ENST00000459788 CCDC160A6NGH7 325 aa7.33□□□□□ -1.24
HDLBP-228ENST00000459788 SFT2D2O95562 160 aa7.33□□□□□ -1.24
HDLBP-228ENST00000459788 CA1P00915 261 aaPredicted RBP7.33□□□□□ -1.24
HDLBP-228ENST00000459788 IFNA4P05014 189 aa7.33□□□□□ -1.24
HDLBP-228ENST00000459788 IL4P05112 153 aa7.33□□□□□ -1.24
HDLBP-228ENST00000459788 SNRPD3P62318 126 aaKnown RBP7.33□□□□□ -1.24
HDLBP-228ENST00000459788 CENPSQ8N2Z9 138 aa7.33□□□□□ -1.24
HDLBP-228ENST00000459788 OR11H2Q8NH07 326 aa7.33□□□□□ -1.24
HDLBP-228ENST00000459788 CLUHP3Q96NS8 147 aa7.33□□□□□ -1.24
HDLBP-228ENST00000459788 TRGV9Q99603 122 aa7.33□□□□□ -1.24
HDLBP-228ENST00000459788 C7orf50Q9BRJ6 194 aaKnown RBP7.33□□□□□ -1.24
HDLBP-228ENST00000459788 C1QTNF4Q9BXJ3 329 aa7.33□□□□□ -1.24
HDLBP-228ENST00000459788 HRH4Q9H3N8 390 aa7.33□□□□□ -1.24
HDLBP-228ENST00000459788 NRN1Q9NPD7 142 aa7.33□□□□□ -1.24
HDLBP-228ENST00000459788 SLC45A2Q9UMX9 530 aa7.33□□□□□ -1.24
HDLBP-228ENST00000459788 NXPH3O95157 252 aa7.32□□□□□ -1.24
HDLBP-228ENST00000459788 PSG1P11464 419 aa7.32□□□□□ -1.24
HDLBP-228ENST00000459788 MIFP14174 115 aa7.32□□□□□ -1.24
HDLBP-228ENST00000459788 NUTF2P61970 127 aaKnown RBP7.32□□□□□ -1.24
HDLBP-228ENST00000459788 DHRS2Q13268 280 aa7.32□□□□□ -1.24
HDLBP-228ENST00000459788 GAMTQ14353 236 aa7.32□□□□□ -1.24
HDLBP-228ENST00000459788 USF2Q15853 346 aaPredicted RBP7.32□□□□□ -1.24
HDLBP-228ENST00000459788 ZNF124Q15973 351 aa7.32□□□□□ -1.24
HDLBP-228ENST00000459788 SPATA31B1PQ5VZV4 182 aa7.32□□□□□ -1.24
HDLBP-228ENST00000459788 SIGLEC15Q6ZMC9 328 aa7.32□□□□□ -1.24
HDLBP-228ENST00000459788 TMED4Q7Z7H5 227 aa7.32□□□□□ -1.24
HDLBP-228ENST00000459788 THAP8Q8NA92 274 aa7.32□□□□□ -1.24
HDLBP-228ENST00000459788 LINC00476Q8WZB0 136 aa7.32□□□□□ -1.24
HDLBP-228ENST00000459788 RNF125Q96EQ8 232 aa7.32□□□□□ -1.24
HDLBP-228ENST00000459788 ACY3Q96HD9 319 aa7.32□□□□□ -1.24
HDLBP-228ENST00000459788 SRRQ9GZT4 340 aa7.32□□□□□ -1.24
HDLBP-228ENST00000459788 IGHV3-66A0A0C4DH42 116 aa7.31□□□□□ -1.24
HDLBP-228ENST00000459788 ZFP92A6NM28 416 aa7.31□□□□□ -1.24
HDLBP-228ENST00000459788 CENPXA8MT69 81 aa7.31□□□□□ -1.24
HDLBP-228ENST00000459788 ZNF705EA8MWA4 302 aaPredicted RBP7.31□□□□□ -1.24
HDLBP-228ENST00000459788 SNRPGP15A8MWD9 76 aa7.31□□□□□ -1.24
HDLBP-228ENST00000459788 C11orf94C9JXX5 98 aa7.31□□□□□ -1.24
HDLBP-228ENST00000459788 SYNGR2O43760 224 aa7.31□□□□□ -1.24
HDLBP-228ENST00000459788 VAMP1P23763 118 aa7.31□□□□□ -1.24
HDLBP-228ENST00000459788 NKX2-1P43699 371 aaPredicted RBP7.31□□□□□ -1.24
HDLBP-228ENST00000459788 INPP1P49441 399 aa7.31□□□□□ -1.24
HDLBP-228ENST00000459788 GGNBP1Q5YKI7 109 aa7.31□□□□□ -1.24
HDLBP-228ENST00000459788 LEMD1Q68G75 181 aa7.31□□□□□ -1.24
HDLBP-228ENST00000459788 FAM24BQ8N5W8 94 aa7.31□□□□□ -1.24
HDLBP-228ENST00000459788 C11orf45Q8TAV5 145 aa7.31□□□□□ -1.24
HDLBP-228ENST00000459788 PRR13Q9NZ81 148 aa7.31□□□□□ -1.24
HDLBP-228ENST00000459788 NDUFA13Q9P0J0 144 aa7.31□□□□□ -1.24
HDLBP-228ENST00000459788 IGKV1D-37A0A075B6S9 117 aa7.3□□□□□ -1.24
HDLBP-228ENST00000459788 NDUFB6O95139 128 aa7.3□□□□□ -1.24
HDLBP-228ENST00000459788 ZNF688P0C7X2 276 aa7.3□□□□□ -1.24
HDLBP-228ENST00000459788 ID1P41134 155 aa7.3□□□□□ -1.24
HDLBP-228ENST00000459788 MEOX2P50222 304 aa7.3□□□□□ -1.24
HDLBP-228ENST00000459788 EWSR1Q01844 656 aaKnown RBP eCLIP7.3□□□□□ -1.24
HDLBP-228ENST00000459788 ID3Q02535 119 aa7.3□□□□□ -1.24
HDLBP-228ENST00000459788 PPP1R1AQ13522 171 aa7.3□□□□□ -1.24
HDLBP-228ENST00000459788 TRIQKQ629K1 86 aa7.3□□□□□ -1.24
HDLBP-228ENST00000459788 COQ8AQ8NI60 647 aa7.3□□□□□ -1.24
HDLBP-228ENST00000459788 PHLDA1Q8WV24 401 aaPredicted RBP7.3□□□□□ -1.24
HDLBP-228ENST00000459788 GPR82Q96P67 336 aa7.3□□□□□ -1.24
HDLBP-228ENST00000459788 RAB40CQ96S21 281 aa7.3□□□□□ -1.24
HDLBP-228ENST00000459788 C9orf170A2RU37 121 aa7.29□□□□□ -1.24
HDLBP-228ENST00000459788 PRSS46E5RG02 174 aa7.29□□□□□ -1.24
HDLBP-228ENST00000459788 FNDC10F2Z333 226 aa7.29□□□□□ -1.24
HDLBP-228ENST00000459788 GIG44P09565 113 aaPredicted RBP7.29□□□□□ -1.24
HDLBP-228ENST00000459788 PSMB3P49720 205 aa7.29□□□□□ -1.24
HDLBP-228ENST00000459788 PMS2P11Q13670 270 aa7.29□□□□□ -1.24
HDLBP-228ENST00000459788 LGALS9CQ6DKI2 356 aa7.29□□□□□ -1.24
HDLBP-228ENST00000459788 LINC00299Q6ZSB3 139 aa7.29□□□□□ -1.24
HDLBP-228ENST00000459788 S100A7AQ86SG5 101 aa7.29□□□□□ -1.24
HDLBP-228ENST00000459788 Q8NAQ8 132 aa7.29□□□□□ -1.24
HDLBP-228ENST00000459788 CSNK1G2-AS1Q8NCQ2 148 aa7.29□□□□□ -1.24
HDLBP-228ENST00000459788 OR4D5Q8NGN0 318 aa7.29□□□□□ -1.24
HDLBP-228ENST00000459788 RNF24Q9Y225 148 aa7.29□□□□□ -1.24
HDLBP-228ENST00000459788 HYDINQ4G0P3 5121 aa7.28□□□□□ -1.24
HDLBP-228ENST00000459788 ISLRO14498 428 aa7.28□□□□□ -1.24
HDLBP-228ENST00000459788 IFNA21P01568 189 aa7.28□□□□□ -1.24
HDLBP-228ENST00000459788 HLA-DRB4P13762 266 aa7.28□□□□□ -1.24
HDLBP-228ENST00000459788 TAS2R30P59541 319 aa7.28□□□□□ -1.24
HDLBP-228ENST00000459788 PSMG4Q5JS54 123 aa7.28□□□□□ -1.24
HDLBP-228ENST00000459788 ACTL10Q5JWF8 245 aa7.28□□□□□ -1.24
HDLBP-228ENST00000459788 BPIFCQ8NFQ6 507 aa7.28□□□□□ -1.24
HDLBP-228ENST00000459788 NEU1Q99519 415 aa7.28□□□□□ -1.24
HDLBP-228ENST00000459788 STRAPQ9Y3F4 350 aaKnown RBP7.28□□□□□ -1.24
HDLBP-228ENST00000459788 HLA-DRB4X5D2U9 266 aa7.28□□□□□ -1.24
HDLBP-228ENST00000459788 KMT2AQ03164 3969 aa7.28□□□□□ -1.24
HDLBP-228ENST00000459788 SMIM9A6NGZ8 99 aa7.27□□□□□ -1.25
HDLBP-228ENST00000459788 H3BMM0 161 aa7.27□□□□□ -1.25
HDLBP-228ENST00000459788 HOXB5P09067 269 aa7.27□□□□□ -1.25
HDLBP-228ENST00000459788 OR4E1P0C645 316 aa7.27□□□□□ -1.25
HDLBP-228ENST00000459788 IAPPP10997 89 aa7.27□□□□□ -1.25
HDLBP-228ENST00000459788 GALR1P47211 349 aa7.27□□□□□ -1.25
HDLBP-228ENST00000459788 PAX9P55771 341 aa7.27□□□□□ -1.25
HDLBP-228ENST00000459788 SELENOTP62341 195 aa7.27□□□□□ -1.25
HDLBP-228ENST00000459788 ZNF90Q03938 601 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms