RNA–Protein interactions for RNA: ENST00000459274.1

RNU1-88P-201, Transcript of RNA, U1 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU1-88P, Length 128 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-88P-201ENST00000459274 OR5AU1Q8NGC0 362 aa4.58□□□□□ -1.68
RNU1-88P-201ENST00000459274 CMTM2Q8TAZ6 248 aa4.58□□□□□ -1.68
RNU1-88P-201ENST00000459274 MBD3L1Q8WWY6 194 aa4.58□□□□□ -1.68
RNU1-88P-201ENST00000459274 TMEM190Q8WZ59 177 aa4.58□□□□□ -1.68
RNU1-88P-201ENST00000459274 RCC1LQ96I51 464 aaKnown RBP4.58□□□□□ -1.68
RNU1-88P-201ENST00000459274 UBE2E2Q96LR5 201 aa4.58□□□□□ -1.68
RNU1-88P-201ENST00000459274 NOL4LQ96MY1 436 aaPredicted RBP4.58□□□□□ -1.68
RNU1-88P-201ENST00000459274 C20orf24Q9BUV8 137 aa4.58□□□□□ -1.68
RNU1-88P-201ENST00000459274 OR51M1Q9H341 326 aa4.58□□□□□ -1.68
RNU1-88P-201ENST00000459274 FNDC4Q9H6D8 234 aaPredicted RBP4.58□□□□□ -1.68
RNU1-88P-201ENST00000459274 DOK5Q9P104 306 aa4.58□□□□□ -1.68
RNU1-88P-201ENST00000459274 PEMTQ9UBM1 199 aa4.58□□□□□ -1.68
RNU1-88P-201ENST00000459274 PEF1Q9UBV8 284 aaKnown RBP4.58□□□□□ -1.68
RNU1-88P-201ENST00000459274 VAX2Q9UIW0 290 aa4.58□□□□□ -1.68
RNU1-88P-201ENST00000459274 UFC1Q9Y3C8 167 aa4.58□□□□□ -1.68
RNU1-88P-201ENST00000459274 LSM4Q9Y4Z0 139 aaKnown RBP4.58□□□□□ -1.68
RNU1-88P-201ENST00000459274 SOX21Q9Y651 276 aaPredicted RBP4.58□□□□□ -1.68
RNU1-88P-201ENST00000459274 CSPG4Q6UVK1 2322 aa4.58□□□□□ -1.68
RNU1-88P-201ENST00000459274 LRBAP50851 2863 aa4.57□□□□□ -1.68
RNU1-88P-201ENST00000459274 CFAP46Q8IYW2 2715 aa4.57□□□□□ -1.68
RNU1-88P-201ENST00000459274 A0A1B0GW64 132 aa4.57□□□□□ -1.68
RNU1-88P-201ENST00000459274 ZNF785A8K8V0 405 aa4.57□□□□□ -1.68
RNU1-88P-201ENST00000459274 INAFM1C9JVW0 142 aa4.57□□□□□ -1.68
RNU1-88P-201ENST00000459274 K7EIM0 57 aa4.57□□□□□ -1.68
RNU1-88P-201ENST00000459274 NDUFA4O00483 81 aa4.57□□□□□ -1.68
RNU1-88P-201ENST00000459274 TGOLN2O43493 480 aa4.57□□□□□ -1.68
RNU1-88P-201ENST00000459274 PDE6DO43924 150 aa4.57□□□□□ -1.68
RNU1-88P-201ENST00000459274 CRLF1O75462 422 aa4.57□□□□□ -1.68
RNU1-88P-201ENST00000459274 IGHV3-23P01764 117 aa4.57□□□□□ -1.68
RNU1-88P-201ENST00000459274 AMY1AP04745 511 aa4.57□□□□□ -1.68
RNU1-88P-201ENST00000459274 IGLC1P0CG04 106 aa4.57□□□□□ -1.68
RNU1-88P-201ENST00000459274 EGR2P11161 476 aaPredicted RBP4.57□□□□□ -1.68
RNU1-88P-201ENST00000459274 MDKP21741 143 aaPredicted RBP4.57□□□□□ -1.68
RNU1-88P-201ENST00000459274 GALR1P47211 349 aa4.57□□□□□ -1.68
RNU1-88P-201ENST00000459274 CEBPGP53567 150 aa4.57□□□□□ -1.68
RNU1-88P-201ENST00000459274 PAFAH1B2P68402 229 aa4.57□□□□□ -1.68
RNU1-88P-201ENST00000459274 PRR20EP86478 221 aa4.57□□□□□ -1.68
RNU1-88P-201ENST00000459274 PRR20CP86479 221 aa4.57□□□□□ -1.68
RNU1-88P-201ENST00000459274 PRR20DP86480 221 aa4.57□□□□□ -1.68
RNU1-88P-201ENST00000459274 PRR20BP86481 221 aa4.57□□□□□ -1.68
RNU1-88P-201ENST00000459274 PRR20AP86496 221 aa4.57□□□□□ -1.68
RNU1-88P-201ENST00000459274 PSG9Q00887 426 aa4.57□□□□□ -1.68
RNU1-88P-201ENST00000459274 ZNF90Q03938 601 aa4.57□□□□□ -1.68
RNU1-88P-201ENST00000459274 FOXL1Q12952 345 aa4.57□□□□□ -1.68
RNU1-88P-201ENST00000459274 GUK1Q16774 197 aa4.57□□□□□ -1.68
RNU1-88P-201ENST00000459274 HAGHQ16775 308 aa4.57□□□□□ -1.68
RNU1-88P-201ENST00000459274 ZNF329Q86UD4 541 aa4.57□□□□□ -1.68
RNU1-88P-201ENST00000459274 ZNF502Q8TBZ5 544 aa4.57□□□□□ -1.68
RNU1-88P-201ENST00000459274 TMEM170AQ8WVE7 144 aa4.57□□□□□ -1.68
RNU1-88P-201ENST00000459274 PCNPQ8WW12 178 aaKnown RBP4.57□□□□□ -1.68
RNU1-88P-201ENST00000459274 WFDC12Q8WWY7 111 aa4.57□□□□□ -1.68
RNU1-88P-201ENST00000459274 RPUSD4Q96CM3 377 aaKnown RBP4.57□□□□□ -1.68
RNU1-88P-201ENST00000459274 FAM210AQ96ND0 272 aa4.57□□□□□ -1.68
RNU1-88P-201ENST00000459274 FANCD2OSQ96PS1 177 aa4.57□□□□□ -1.68
RNU1-88P-201ENST00000459274 PAXXQ9BUH6 204 aa4.57□□□□□ -1.68
RNU1-88P-201ENST00000459274 PRELID1Q9Y255 219 aa4.57□□□□□ -1.68
RNU1-88P-201ENST00000459274 PUS1Q9Y606 427 aaKnown RBP eCLIP4.57□□□□□ -1.68
RNU1-88P-201ENST00000459274 S4R3C0 116 aa4.57□□□□□ -1.68
RNU1-88P-201ENST00000459274 NAV2Q8IVL1 2488 aa4.56□□□□□ -1.68
RNU1-88P-201ENST00000459274 HRNRQ86YZ3 2850 aaPredicted RBP4.56□□□□□ -1.68
RNU1-88P-201ENST00000459274 NAV3Q8IVL0 2385 aa4.56□□□□□ -1.68
RNU1-88P-201ENST00000459274 CHD6Q8TD26 2715 aa4.56□□□□□ -1.68
RNU1-88P-201ENST00000459274 ADGRG4Q8IZF6 3080 aa4.56□□□□□ -1.68
RNU1-88P-201ENST00000459274 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.56□□□□□ -1.68
RNU1-88P-201ENST00000459274 HELTA6NFD8 242 aa4.56□□□□□ -1.68
RNU1-88P-201ENST00000459274 MFSD2BA6NFX1 497 aa4.56□□□□□ -1.68
RNU1-88P-201ENST00000459274 LINC01548A6NM66 108 aa4.56□□□□□ -1.68
RNU1-88P-201ENST00000459274 SEC14L6B5MCN3 397 aa4.56□□□□□ -1.68
RNU1-88P-201ENST00000459274 F8W036 122 aa4.56□□□□□ -1.68
RNU1-88P-201ENST00000459274 OR2C1O95371 312 aa4.56□□□□□ -1.68
RNU1-88P-201ENST00000459274 IGLV1-40P01703 118 aa4.56□□□□□ -1.68
RNU1-88P-201ENST00000459274 IGHV3-11P01762 117 aa4.56□□□□□ -1.68
RNU1-88P-201ENST00000459274 HSPB1P04792 205 aaKnown RBP4.56□□□□□ -1.68
RNU1-88P-201ENST00000459274 CTSGP08311 255 aa4.56□□□□□ -1.68
RNU1-88P-201ENST00000459274 STAG3L2P0CL84 134 aa4.56□□□□□ -1.68
RNU1-88P-201ENST00000459274 STAG3L3P0CL85 134 aa4.56□□□□□ -1.68
RNU1-88P-201ENST00000459274 ARL14EPLP0DKL9 152 aa4.56□□□□□ -1.68
RNU1-88P-201ENST00000459274 GATA2P23769 480 aaPredicted RBP4.56□□□□□ -1.68
RNU1-88P-201ENST00000459274 PPIFP30405 207 aaKnown RBP4.56□□□□□ -1.68
RNU1-88P-201ENST00000459274 FHITP49789 147 aa4.56□□□□□ -1.68
RNU1-88P-201ENST00000459274 MFAP2P55001 183 aa4.56□□□□□ -1.68
RNU1-88P-201ENST00000459274 FGF8P55075 233 aaPredicted RBP4.56□□□□□ -1.68
RNU1-88P-201ENST00000459274 PLP1P60201 277 aa4.56□□□□□ -1.68
RNU1-88P-201ENST00000459274 UBE2L3P68036 154 aaKnown RBP4.56□□□□□ -1.68
RNU1-88P-201ENST00000459274 NDPQ00604 133 aa4.56□□□□□ -1.68
RNU1-88P-201ENST00000459274 FAM74A3Q4VXF1 159 aa4.56□□□□□ -1.68
RNU1-88P-201ENST00000459274 TOR2AQ5JU69 321 aa4.56□□□□□ -1.68
RNU1-88P-201ENST00000459274 SOHLH1Q5JUK2 328 aa4.56□□□□□ -1.68
RNU1-88P-201ENST00000459274 C1orf194Q5T5A4 169 aa4.56□□□□□ -1.68
RNU1-88P-201ENST00000459274 ASPHD1Q5U4P2 390 aa4.56□□□□□ -1.68
RNU1-88P-201ENST00000459274 SAMD13Q5VXD3 122 aa4.56□□□□□ -1.68
RNU1-88P-201ENST00000459274 SLC7A5P1Q8MH63 180 aa4.56□□□□□ -1.68
RNU1-88P-201ENST00000459274 Q8N2B8 174 aa4.56□□□□□ -1.68
RNU1-88P-201ENST00000459274 RPP25LQ8N5L8 163 aaKnown RBP4.56□□□□□ -1.68
RNU1-88P-201ENST00000459274 SMR3AQ99954 134 aa4.56□□□□□ -1.68
RNU1-88P-201ENST00000459274 SLC25A39Q9BZJ4 359 aaPredicted RBP4.56□□□□□ -1.68
RNU1-88P-201ENST00000459274 SLC35B3Q9H1N7 401 aa4.56□□□□□ -1.68
RNU1-88P-201ENST00000459274 ZNF702PQ9H963 129 aa4.56□□□□□ -1.68
RNU1-88P-201ENST00000459274 CLEC5AQ9NY25 188 aa4.56□□□□□ -1.68
RNU1-88P-201ENST00000459274 RNF114Q9Y508 228 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms