RNA–Protein interactions for RNA: ENST00000458564.5

HDLBP-227, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-227ENST00000458564 GLYATL2Q8WU03 294 aa7.41□□□□□ -1.22
HDLBP-227ENST00000458564 NPIPB3Q92617 1050 aa7.41□□□□□ -1.22
HDLBP-227ENST00000458564 RBPMSQ93062 196 aaKnown RBP7.41□□□□□ -1.22
HDLBP-227ENST00000458564 RNF125Q96EQ8 232 aa7.41□□□□□ -1.22
HDLBP-227ENST00000458564 VCX3AQ9NNX9 186 aa7.41□□□□□ -1.22
HDLBP-227ENST00000458564 CACNG5Q9UF02 275 aa7.41□□□□□ -1.22
HDLBP-227ENST00000458564 SOCS3O14543 225 aa7.4□□□□□ -1.22
HDLBP-227ENST00000458564 OR5AC1P0C628 307 aa7.4□□□□□ -1.22
HDLBP-227ENST00000458564 PSG1P11464 419 aa7.4□□□□□ -1.22
HDLBP-227ENST00000458564 EMP1P54849 157 aa7.4□□□□□ -1.22
HDLBP-227ENST00000458564 ZNF79Q15937 498 aa7.4□□□□□ -1.22
HDLBP-227ENST00000458564 NMSQ5H8A3 153 aa7.4□□□□□ -1.22
HDLBP-227ENST00000458564 C1orf134Q5TEV5 83 aa7.4□□□□□ -1.22
HDLBP-227ENST00000458564 SPATA31B1PQ5VZV4 182 aa7.4□□□□□ -1.22
HDLBP-227ENST00000458564 OR51G1Q8NGK1 321 aa7.4□□□□□ -1.22
HDLBP-227ENST00000458564 WDR12Q9GZL7 423 aaKnown RBP7.4□□□□□ -1.22
HDLBP-227ENST00000458564 PFDN2Q9UHV9 154 aa7.4□□□□□ -1.22
HDLBP-227ENST00000458564 A0A087WXM4 84 aa7.39□□□□□ -1.23
HDLBP-227ENST00000458564 TEX13DA0A0J9YY54 714 aaPredicted RBP7.39□□□□□ -1.23
HDLBP-227ENST00000458564 CEBPZOSA8MTT3 80 aa7.39□□□□□ -1.23
HDLBP-227ENST00000458564 CDK2AP2O75956 126 aa7.39□□□□□ -1.23
HDLBP-227ENST00000458564 PAX9P55771 341 aa7.39□□□□□ -1.23
HDLBP-227ENST00000458564 TAS2R19P59542 299 aa7.39□□□□□ -1.23
HDLBP-227ENST00000458564 SURF2Q15527 256 aaPredicted RBP7.39□□□□□ -1.23
HDLBP-227ENST00000458564 RNASE12Q5GAN4 147 aaKnown RBP7.39□□□□□ -1.23
HDLBP-227ENST00000458564 C1orf194Q5T5A4 169 aa7.39□□□□□ -1.23
HDLBP-227ENST00000458564 SELENOHQ8IZQ5 122 aaKnown RBP7.39□□□□□ -1.23
HDLBP-227ENST00000458564 TMEM229BQ8NBD8 167 aa7.39□□□□□ -1.23
HDLBP-227ENST00000458564 MARCH1Q8TCQ1 289 aa7.39□□□□□ -1.23
HDLBP-227ENST00000458564 C15orf40Q8WUR7 153 aa7.39□□□□□ -1.23
HDLBP-227ENST00000458564 GPR146Q96CH1 333 aa7.39□□□□□ -1.23
HDLBP-227ENST00000458564 ACY3Q96HD9 319 aa7.39□□□□□ -1.23
HDLBP-227ENST00000458564 NAA60Q9H7X0 242 aa7.39□□□□□ -1.23
HDLBP-227ENST00000458564 GOLT1BQ9Y3E0 138 aa7.39□□□□□ -1.23
HDLBP-227ENST00000458564 TMEM56-RWDD3S4R434 201 aa7.39□□□□□ -1.23
HDLBP-227ENST00000458564 NACAE9PAV3 2078 aa7.39□□□□□ -1.23
HDLBP-227ENST00000458564 IGHV3OR16-12A0A075B7B8 117 aa7.38□□□□□ -1.23
HDLBP-227ENST00000458564 LOC102723971A0A1B0GUV8 181 aa7.38□□□□□ -1.23
HDLBP-227ENST00000458564 A8MTW9 85 aa7.38□□□□□ -1.23
HDLBP-227ENST00000458564 FAM25AB3EWG3 89 aa7.38□□□□□ -1.23
HDLBP-227ENST00000458564 FAM25CB3EWG5 89 aa7.38□□□□□ -1.23
HDLBP-227ENST00000458564 FAM25GB3EWG6 89 aa7.38□□□□□ -1.23
HDLBP-227ENST00000458564 ISLRO14498 428 aa7.38□□□□□ -1.23
HDLBP-227ENST00000458564 TNFAIP8O95379 198 aa7.38□□□□□ -1.23
HDLBP-227ENST00000458564 RAB3DO95716 219 aa7.38□□□□□ -1.23
HDLBP-227ENST00000458564 IGKV3-20P01619 116 aa7.38□□□□□ -1.23
HDLBP-227ENST00000458564 HBE1P02100 147 aa7.38□□□□□ -1.23
HDLBP-227ENST00000458564 ID1P41134 155 aa7.38□□□□□ -1.23
HDLBP-227ENST00000458564 ALDH3B2P48448 385 aa7.38□□□□□ -1.23
HDLBP-227ENST00000458564 RORCP51449 518 aa7.38□□□□□ -1.23
HDLBP-227ENST00000458564 DEFB1P60022 68 aa7.38□□□□□ -1.23
HDLBP-227ENST00000458564 VBP1P61758 197 aa7.38□□□□□ -1.23
HDLBP-227ENST00000458564 SUPT4H1P63272 117 aaKnown RBP7.38□□□□□ -1.23
HDLBP-227ENST00000458564 SSBP1Q04837 148 aaKnown RBP7.38□□□□□ -1.23
HDLBP-227ENST00000458564 SCGB2B2Q4G0G5 96 aa7.38□□□□□ -1.23
HDLBP-227ENST00000458564 GPR107Q5VW38 600 aa7.38□□□□□ -1.23
HDLBP-227ENST00000458564 SAMD13Q5VXD3 122 aa7.38□□□□□ -1.23
HDLBP-227ENST00000458564 STEAP1BQ6NZ63 245 aa7.38□□□□□ -1.23
HDLBP-227ENST00000458564 MZT2AQ6P582 158 aa7.38□□□□□ -1.23
HDLBP-227ENST00000458564 TMEM88Q6PEY1 159 aa7.38□□□□□ -1.23
HDLBP-227ENST00000458564 C1orf158Q8N1D5 194 aa7.38□□□□□ -1.23
HDLBP-227ENST00000458564 C15orf53Q8NAA6 179 aa7.38□□□□□ -1.23
HDLBP-227ENST00000458564 RTBDNQ9BSG5 229 aaPredicted RBP7.38□□□□□ -1.23
HDLBP-227ENST00000458564 FUNDC2Q9BWH2 189 aa7.38□□□□□ -1.23
HDLBP-227ENST00000458564 SLC35B3Q9H1N7 401 aa7.38□□□□□ -1.23
HDLBP-227ENST00000458564 C14orf166Q9Y224 244 aaKnown RBP7.38□□□□□ -1.23
HDLBP-227ENST00000458564 YTHDF2Q9Y5A9 579 aaKnown RBP7.38□□□□□ -1.23
HDLBP-227ENST00000458564 U3KQ87 197 aa7.38□□□□□ -1.23
HDLBP-227ENST00000458564 APOBP04114 4563 aaKnown RBP7.38□□□□□ -1.23
HDLBP-227ENST00000458564 A0A0J9YX75 114 aa7.37□□□□□ -1.23
HDLBP-227ENST00000458564 CRYM-AS1A6NIL9 109 aa7.37□□□□□ -1.23
HDLBP-227ENST00000458564 SULT1A3P0DMM9 295 aa7.37□□□□□ -1.23
HDLBP-227ENST00000458564 SULT1A4P0DMN0 295 aa7.37□□□□□ -1.23
HDLBP-227ENST00000458564 ATP5IP56385 69 aaPredicted RBP7.37□□□□□ -1.23
HDLBP-227ENST00000458564 FXYD7P58549 80 aa7.37□□□□□ -1.23
HDLBP-227ENST00000458564 PSG9Q00887 426 aa7.37□□□□□ -1.23
HDLBP-227ENST00000458564 KLF9Q13886 244 aaPredicted RBP7.37□□□□□ -1.23
HDLBP-227ENST00000458564 MEF2DQ14814 521 aa7.37□□□□□ -1.23
HDLBP-227ENST00000458564 RRN3P1Q2M238 152 aa7.37□□□□□ -1.23
HDLBP-227ENST00000458564 TMEM268Q5VZI3 342 aa7.37□□□□□ -1.23
HDLBP-227ENST00000458564 OR4B1Q8NGF8 309 aa7.37□□□□□ -1.23
HDLBP-227ENST00000458564 COQ8AQ8NI60 647 aa7.37□□□□□ -1.23
HDLBP-227ENST00000458564 AP3S1Q92572 193 aa7.37□□□□□ -1.23
HDLBP-227ENST00000458564 IL22RA2Q969J5 263 aa7.37□□□□□ -1.23
HDLBP-227ENST00000458564 LINC00052Q96N35 136 aa7.37□□□□□ -1.23
HDLBP-227ENST00000458564 PBDC1Q9BVG4 233 aa7.37□□□□□ -1.23
HDLBP-227ENST00000458564 EXTL2Q9UBQ6 330 aa7.37□□□□□ -1.23
HDLBP-227ENST00000458564 HSPB7Q9UBY9 170 aa7.37□□□□□ -1.23
HDLBP-227ENST00000458564 DNAH5Q8TE73 4624 aa7.37□□□□□ -1.23
HDLBP-227ENST00000458564 IGKV1D-37A0A075B6S9 117 aa7.36□□□□□ -1.23
HDLBP-227ENST00000458564 GABARAPH6UMI1 98 aa7.36□□□□□ -1.23
HDLBP-227ENST00000458564 GABARAPO95166 117 aa7.36□□□□□ -1.23
HDLBP-227ENST00000458564 HTN3P15516 51 aa7.36□□□□□ -1.23
HDLBP-227ENST00000458564 GPX4P36969 197 aaPredicted RBP7.36□□□□□ -1.23
HDLBP-227ENST00000458564 MEOX2P50222 304 aa7.36□□□□□ -1.23
HDLBP-227ENST00000458564 DAD1P61803 113 aa7.36□□□□□ -1.23
HDLBP-227ENST00000458564 MRPS10P82664 201 aaKnown RBP7.36□□□□□ -1.23
HDLBP-227ENST00000458564 FAM78BQ5VT40 261 aa7.36□□□□□ -1.23
HDLBP-227ENST00000458564 EBLN2Q6P2I7 272 aa7.36□□□□□ -1.23
HDLBP-227ENST00000458564 DTD1Q8TEA8 209 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms