RNA–Protein interactions for RNA: ENST00000458046.6

SYNE2-207, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 2,669 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-207ENST00000458046 PTPRBP23467 1997 aa9.54□□□□□ -0.88
SYNE2-207ENST00000458046 SPTBN2O15020 2390 aa9.54□□□□□ -0.88
SYNE2-207ENST00000458046 MGAQ8IWI9 3026 aa9.54□□□□□ -0.88
SYNE2-207ENST00000458046 SAA2-SAA4A0A096LPE2 208 aa9.54□□□□□ -0.88
SYNE2-207ENST00000458046 A0A1W2PRD5 423 aa9.54□□□□□ -0.88
SYNE2-207ENST00000458046 A0A1W2PRF3 423 aa9.54□□□□□ -0.88
SYNE2-207ENST00000458046 A0A1W2PRM7 423 aa9.54□□□□□ -0.88
SYNE2-207ENST00000458046 CA2P00918 260 aa9.54□□□□□ -0.88
SYNE2-207ENST00000458046 CGAP01215 116 aa9.54□□□□□ -0.88
SYNE2-207ENST00000458046 OR4A8P0C604 315 aa9.54□□□□□ -0.88
SYNE2-207ENST00000458046 SAA2P0DJI9 122 aaPredicted RBP9.54□□□□□ -0.88
SYNE2-207ENST00000458046 TAL2Q16559 108 aa9.54□□□□□ -0.88
SYNE2-207ENST00000458046 DEFB109BQ30KR1 87 aa9.54□□□□□ -0.88
SYNE2-207ENST00000458046 OR4A47Q6IF82 309 aa9.54□□□□□ -0.88
SYNE2-207ENST00000458046 LYG1Q8N1E2 194 aa9.54□□□□□ -0.88
SYNE2-207ENST00000458046 SPAARA0A1B0GVQ0 90 aa9.53□□□□□ -0.88
SYNE2-207ENST00000458046 A8MWP6 167 aa9.53□□□□□ -0.88
SYNE2-207ENST00000458046 SLC17A3O00476 420 aa9.53□□□□□ -0.88
SYNE2-207ENST00000458046 GCGP01275 180 aa9.53□□□□□ -0.88
SYNE2-207ENST00000458046 SNRPCP09234 159 aaKnown RBP9.53□□□□□ -0.88
SYNE2-207ENST00000458046 CD99P14209 185 aa9.53□□□□□ -0.88
SYNE2-207ENST00000458046 RPL31P62899 125 aaKnown RBP9.53□□□□□ -0.88
SYNE2-207ENST00000458046 KIR3DS1Q14943 382 aa9.53□□□□□ -0.88
SYNE2-207ENST00000458046 C17orf58Q2M2W7 97 aa9.53□□□□□ -0.88
SYNE2-207ENST00000458046 HLA-DRB5Q30154 266 aa9.53□□□□□ -0.88
SYNE2-207ENST00000458046 TEPPQ6URK8 271 aa9.53□□□□□ -0.88
SYNE2-207ENST00000458046 STPG3Q8N7X2 389 aa9.53□□□□□ -0.88
SYNE2-207ENST00000458046 OR4P4Q8NGL7 312 aa9.53□□□□□ -0.88
SYNE2-207ENST00000458046 OR4S2Q8NH73 311 aa9.53□□□□□ -0.88
SYNE2-207ENST00000458046 DDB2Q92466 427 aa9.53□□□□□ -0.88
SYNE2-207ENST00000458046 ELOVL5Q9NYP7 299 aa9.53□□□□□ -0.88
SYNE2-207ENST00000458046 SIGLEC8Q9NYZ4 499 aa9.53□□□□□ -0.88
SYNE2-207ENST00000458046 TET2Q6N021 2002 aaPredicted RBP9.53□□□□□ -0.88
SYNE2-207ENST00000458046 CENPVL3A0A0U1RRI6 287 aa9.53□□□□□ -0.88
SYNE2-207ENST00000458046 C15orf61A6NNL5 157 aa9.53□□□□□ -0.88
SYNE2-207ENST00000458046 TNFRSF13BO14836 293 aaPredicted RBP9.53□□□□□ -0.88
SYNE2-207ENST00000458046 NPY1RP25929 384 aa9.53□□□□□ -0.88
SYNE2-207ENST00000458046 GCHFRP30047 84 aa9.53□□□□□ -0.88
SYNE2-207ENST00000458046 PQLC2Q6ZP29 291 aa9.53□□□□□ -0.88
SYNE2-207ENST00000458046 MOB3BQ86TA1 216 aa9.53□□□□□ -0.88
SYNE2-207ENST00000458046 RPRMLQ8N4K4 120 aa9.53□□□□□ -0.88
SYNE2-207ENST00000458046 GBGT1Q8N5D6 347 aa9.53□□□□□ -0.88
SYNE2-207ENST00000458046 IMMP2LQ96T52 175 aa9.53□□□□□ -0.88
SYNE2-207ENST00000458046 ZNRD1Q9P1U0 126 aa9.53□□□□□ -0.88
SYNE2-207ENST00000458046 GRIFINA4D1Z8 144 aa9.52□□□□□ -0.88
SYNE2-207ENST00000458046 SRRM4A7MD48 611 aaKnown RBP9.52□□□□□ -0.88
SYNE2-207ENST00000458046 HSPE1P61604 102 aaKnown RBP9.52□□□□□ -0.88
SYNE2-207ENST00000458046 CR1LQ2VPA4 569 aa9.52□□□□□ -0.88
SYNE2-207ENST00000458046 DEFB124Q8NES8 71 aa9.52□□□□□ -0.88
SYNE2-207ENST00000458046 OR10G8Q8NGN5 311 aa9.52□□□□□ -0.88
SYNE2-207ENST00000458046 UHRF2Q96PU4 802 aa9.52□□□□□ -0.88
SYNE2-207ENST00000458046 ENY2Q9NPA8 101 aa9.52□□□□□ -0.88
SYNE2-207ENST00000458046 ADMP35318 185 aa9.52□□□□□ -0.89
SYNE2-207ENST00000458046 KLF3P57682 345 aaPredicted RBP9.52□□□□□ -0.89
SYNE2-207ENST00000458046 RNF223E7ERA6 249 aa9.51□□□□□ -0.89
SYNE2-207ENST00000458046 CGB3P0DN86 165 aa9.51□□□□□ -0.89
SYNE2-207ENST00000458046 CGB7P0DN87 165 aa9.51□□□□□ -0.89
SYNE2-207ENST00000458046 PAX1P15863 534 aa9.51□□□□□ -0.89
SYNE2-207ENST00000458046 GATA2P23769 480 aaPredicted RBP9.51□□□□□ -0.89
SYNE2-207ENST00000458046 ZNF90Q03938 601 aa9.51□□□□□ -0.89
SYNE2-207ENST00000458046 MIR17HGQ75NE6 70 aa9.51□□□□□ -0.89
SYNE2-207ENST00000458046 FAM19A1Q7Z5A9 133 aa9.51□□□□□ -0.89
SYNE2-207ENST00000458046 SGK494Q96LW2 274 aa9.51□□□□□ -0.89
SYNE2-207ENST00000458046 MMP23AO75900 390 aa9.51□□□□□ -0.89
SYNE2-207ENST00000458046 LHBP01229 141 aa9.51□□□□□ -0.89
SYNE2-207ENST00000458046 FRMD6-AS1P0C7T7 363 aa9.51□□□□□ -0.89
SYNE2-207ENST00000458046 C8orf88P0DMB2 117 aa9.51□□□□□ -0.89
SYNE2-207ENST00000458046 ESDP10768 282 aa9.51□□□□□ -0.89
SYNE2-207ENST00000458046 CBLN1P23435 193 aa9.51□□□□□ -0.89
SYNE2-207ENST00000458046 RHOBP62745 196 aa9.51□□□□□ -0.89
SYNE2-207ENST00000458046 OR5I1Q13606 314 aa9.51□□□□□ -0.89
SYNE2-207ENST00000458046 MLANAQ16655 118 aa9.51□□□□□ -0.89
SYNE2-207ENST00000458046 IGFL2Q6UWQ7 119 aa9.51□□□□□ -0.89
SYNE2-207ENST00000458046 LINC01561Q8N1V8 128 aa9.51□□□□□ -0.89
SYNE2-207ENST00000458046 CCL13Q99616 98 aa9.51□□□□□ -0.89
SYNE2-207ENST00000458046 IDI2-AS1Q9NZ38 188 aa9.51□□□□□ -0.89
SYNE2-207ENST00000458046 OR51B2Q9Y5P1 312 aa9.51□□□□□ -0.89
SYNE2-207ENST00000458046 TRGV8A0A0C4DH27 118 aa9.5□□□□□ -0.89
SYNE2-207ENST00000458046 G3V4G9 280 aa9.5□□□□□ -0.89
SYNE2-207ENST00000458046 KIR2DS2P43631 304 aa9.5□□□□□ -0.89
SYNE2-207ENST00000458046 TMEM14BQ9NUH8 114 aa9.5□□□□□ -0.89
SYNE2-207ENST00000458046 FKBP11Q9NYL4 201 aa9.5□□□□□ -0.89
SYNE2-207ENST00000458046 YLPM1P49750 1951 aaKnown RBP9.5□□□□□ -0.89
SYNE2-207ENST00000458046 SPTA1P02549 2419 aa9.5□□□□□ -0.89
SYNE2-207ENST00000458046 J3QR06 171 aa9.5□□□□□ -0.89
SYNE2-207ENST00000458046 IGKV1-16P04430 117 aa9.5□□□□□ -0.89
SYNE2-207ENST00000458046 FAM216BQ8N7L0 139 aa9.5□□□□□ -0.89
SYNE2-207ENST00000458046 TXNDC17Q9BRA2 123 aa9.5□□□□□ -0.89
SYNE2-207ENST00000458046 TRGV10A0A0A0MS01 117 aa9.49□□□□□ -0.89
SYNE2-207ENST00000458046 ZNF415Q09FC8 603 aa9.49□□□□□ -0.89
SYNE2-207ENST00000458046 C22orf34Q6ZV56 151 aa9.49□□□□□ -0.89
SYNE2-207ENST00000458046 TNCP24821 2201 aa9.49□□□□□ -0.89
SYNE2-207ENST00000458046 SPINK4O60575 86 aa9.49□□□□□ -0.89
SYNE2-207ENST00000458046 LINC00869P0C866 280 aa9.49□□□□□ -0.89
SYNE2-207ENST00000458046 GLRXP35754 106 aa9.49□□□□□ -0.89
SYNE2-207ENST00000458046 RPL29P47914 159 aaKnown RBP9.49□□□□□ -0.89
SYNE2-207ENST00000458046 KLRB1Q12918 225 aa9.49□□□□□ -0.89
SYNE2-207ENST00000458046 CDSNQ15517 529 aa9.49□□□□□ -0.89
SYNE2-207ENST00000458046 C4orf26Q17RF5 130 aa9.49□□□□□ -0.89
SYNE2-207ENST00000458046 IQCJQ1A5X6 159 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms