RNA–Protein interactions for RNA: ENST00000457312.1

SF3B4-202, Transcript of splicing factor 3b subunit 4, humanhuman

TSL 5

Gene SF3B4, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B4-202ENST00000457312 CORTO00230 105 aa10.53□□□□□ -0.72
SF3B4-202ENST00000457312 PPYP01298 95 aa10.53□□□□□ -0.72
SF3B4-202ENST00000457312 FCER2P06734 321 aa10.53□□□□□ -0.72
SF3B4-202ENST00000457312 F2RP25116 425 aa10.53□□□□□ -0.72
SF3B4-202ENST00000457312 FCGR2CP31995 323 aa10.53□□□□□ -0.72
SF3B4-202ENST00000457312 LPAR6P43657 344 aa10.53□□□□□ -0.72
SF3B4-202ENST00000457312 OR1S2Q8NGQ3 325 aa10.53□□□□□ -0.72
SF3B4-202ENST00000457312 CENPNQ96H22 339 aaPredicted RBP10.53□□□□□ -0.72
SF3B4-202ENST00000457312 Q9HAA7 133 aa10.53□□□□□ -0.72
SF3B4-202ENST00000457312 ANXA10Q9UJ72 324 aa10.53□□□□□ -0.72
SF3B4-202ENST00000457312 ERICH4A6NGS2 130 aa10.52□□□□□ -0.73
SF3B4-202ENST00000457312 UCHL1P09936 223 aa10.52□□□□□ -0.73
SF3B4-202ENST00000457312 YPEL3P61236 119 aaPredicted RBP10.52□□□□□ -0.73
SF3B4-202ENST00000457312 HACD4Q5VWC8 232 aa10.52□□□□□ -0.73
SF3B4-202ENST00000457312 PAXXQ9BUH6 204 aa10.52□□□□□ -0.73
SF3B4-202ENST00000457312 AK6Q9Y3D8 172 aaKnown RBP10.52□□□□□ -0.73
SF3B4-202ENST00000457312 A0A0B4J293 547 aa10.51□□□□□ -0.73
SF3B4-202ENST00000457312 IRGMA1A4Y4 181 aa10.51□□□□□ -0.73
SF3B4-202ENST00000457312 RLN1P04808 185 aa10.51□□□□□ -0.73
SF3B4-202ENST00000457312 RNASE2P10153 161 aaKnown RBP10.51□□□□□ -0.73
SF3B4-202ENST00000457312 PTHLHP12272 177 aa10.51□□□□□ -0.73
SF3B4-202ENST00000457312 FCGR1AP12314 374 aa10.51□□□□□ -0.73
SF3B4-202ENST00000457312 GYS2P54840 703 aa10.51□□□□□ -0.73
SF3B4-202ENST00000457312 ARPC4P59998 168 aa10.51□□□□□ -0.73
SF3B4-202ENST00000457312 LCE2DQ5TA82 110 aaPredicted RBP10.51□□□□□ -0.73
SF3B4-202ENST00000457312 HES5Q5TA89 166 aa10.51□□□□□ -0.73
SF3B4-202ENST00000457312 Q6ZTI0 123 aa10.51□□□□□ -0.73
SF3B4-202ENST00000457312 NUDCD2Q8WVJ2 157 aa10.51□□□□□ -0.73
SF3B4-202ENST00000457312 SLC25A39Q9BZJ4 359 aaPredicted RBP10.51□□□□□ -0.73
SF3B4-202ENST00000457312 AP4S1Q9Y587 144 aa10.51□□□□□ -0.73
SF3B4-202ENST00000457312 LECT2O14960 151 aa10.5□□□□□ -0.73
SF3B4-202ENST00000457312 PAX4O43316 350 aa10.5□□□□□ -0.73
SF3B4-202ENST00000457312 DUSP14O95147 198 aaKnown RBP10.5□□□□□ -0.73
SF3B4-202ENST00000457312 SNCAP37840 140 aa10.5□□□□□ -0.73
SF3B4-202ENST00000457312 FXYD4P59646 89 aa10.5□□□□□ -0.73
SF3B4-202ENST00000457312 HSPE1P61604 102 aaKnown RBP10.5□□□□□ -0.73
SF3B4-202ENST00000457312 TMEM80Q96HE8 168 aa10.5□□□□□ -0.73
SF3B4-202ENST00000457312 ZNF324O75467 553 aaPredicted RBP10.49□□□□□ -0.73
SF3B4-202ENST00000457312 CCNKO75909 580 aa10.49□□□□□ -0.73
SF3B4-202ENST00000457312 OR10J1P30954 320 aa10.49□□□□□ -0.73
SF3B4-202ENST00000457312 NUP62P37198 522 aaPredicted RBP10.49□□□□□ -0.73
SF3B4-202ENST00000457312 OR4A16Q8NH70 328 aa10.49□□□□□ -0.73
SF3B4-202ENST00000457312 TMEM37Q8WXS4 190 aa10.49□□□□□ -0.73
SF3B4-202ENST00000457312 LINC01600Q96MT4 127 aa10.49□□□□□ -0.73
SF3B4-202ENST00000457312 DAPK2Q9UIK4 370 aa10.49□□□□□ -0.73
SF3B4-202ENST00000457312 EFCAB10A6NFE3 127 aa10.48□□□□□ -0.73
SF3B4-202ENST00000457312 IBA57-AS1B1ANH7 110 aa10.48□□□□□ -0.73
SF3B4-202ENST00000457312 RPL5P46777 297 aaKnown RBP10.48□□□□□ -0.73
SF3B4-202ENST00000457312 RND2P52198 227 aa10.48□□□□□ -0.73
SF3B4-202ENST00000457312 CD300CQ08708 224 aa10.48□□□□□ -0.73
SF3B4-202ENST00000457312 NEGR1Q7Z3B1 354 aa10.48□□□□□ -0.73
SF3B4-202ENST00000457312 TMEM17Q86X19 198 aa10.48□□□□□ -0.73
SF3B4-202ENST00000457312 MS4A15Q8N5U1 240 aa10.48□□□□□ -0.73
SF3B4-202ENST00000457312 TSPAN14Q8NG11 270 aa10.48□□□□□ -0.73
SF3B4-202ENST00000457312 TMEM235A6NFC5 223 aa10.47□□□□□ -0.73
SF3B4-202ENST00000457312 INS-IGF2F8WCM5 200 aa10.47□□□□□ -0.73
SF3B4-202ENST00000457312 HSPA13P48723 471 aa10.47□□□□□ -0.73
SF3B4-202ENST00000457312 WNT4P56705 351 aa10.47□□□□□ -0.73
SF3B4-202ENST00000457312 OR51G1Q8NGK1 321 aa10.47□□□□□ -0.73
SF3B4-202ENST00000457312 C16orf92Q96LL3 132 aa10.47□□□□□ -0.73
SF3B4-202ENST00000457312 SNURFLB1AK76 121 aa10.46□□□□□ -0.73
SF3B4-202ENST00000457312 TOMM40O96008 361 aa10.46□□□□□ -0.73
SF3B4-202ENST00000457312 SUPT4H1P63272 117 aaKnown RBP10.46□□□□□ -0.73
SF3B4-202ENST00000457312 MRPL23Q16540 153 aaKnown RBP10.46□□□□□ -0.73
SF3B4-202ENST00000457312 TDRG1Q3Y452 100 aa10.46□□□□□ -0.73
SF3B4-202ENST00000457312 SAMD13Q5VXD3 122 aa10.46□□□□□ -0.73
SF3B4-202ENST00000457312 PRSS54Q6PEW0 395 aa10.46□□□□□ -0.73
SF3B4-202ENST00000457312 TRGV2A0A075B6R0 118 aa10.45□□□□□ -0.74
SF3B4-202ENST00000457312 H7BYZ3 331 aa10.45□□□□□ -0.74
SF3B4-202ENST00000457312 SSX5O60225 188 aa10.45□□□□□ -0.74
SF3B4-202ENST00000457312 PGLYRP1O75594 196 aaPredicted RBP10.45□□□□□ -0.74
SF3B4-202ENST00000457312 RAB6AP20340 208 aa10.45□□□□□ -0.74
SF3B4-202ENST00000457312 CDNFQ49AH0 187 aa10.45□□□□□ -0.74
SF3B4-202ENST00000457312 OR52E5Q8NH55 327 aa10.45□□□□□ -0.74
SF3B4-202ENST00000457312 SEC22AQ96IW7 307 aa10.45□□□□□ -0.74
SF3B4-202ENST00000457312 DPH3P1Q9H4G8 78 aa10.45□□□□□ -0.74
SF3B4-202ENST00000457312 LOC100130705A0A1B0GUX0 176 aa10.44□□□□□ -0.74
SF3B4-202ENST00000457312 MYL12BO14950 172 aa10.44□□□□□ -0.74
SF3B4-202ENST00000457312 RD3LP0DJH9 198 aa10.44□□□□□ -0.74
SF3B4-202ENST00000457312 ZNF182P17025 639 aaPredicted RBP10.44□□□□□ -0.74
SF3B4-202ENST00000457312 PSMB9P28065 219 aa10.44□□□□□ -0.74
SF3B4-202ENST00000457312 SUB1P53999 127 aaKnown RBP eCLIP10.44□□□□□ -0.74
SF3B4-202ENST00000457312 DAZ2Q13117 558 aaKnown RBP10.44□□□□□ -0.74
SF3B4-202ENST00000457312 ARL6IP1Q15041 203 aa10.44□□□□□ -0.74
SF3B4-202ENST00000457312 SLC35G3Q8N808 338 aa10.44□□□□□ -0.74
SF3B4-202ENST00000457312 RBFOX3A6NFN3 312 aa10.43□□□□□ -0.74
SF3B4-202ENST00000457312 PSG1P11464 419 aa10.43□□□□□ -0.74
SF3B4-202ENST00000457312 CDKN1BP46527 198 aa10.43□□□□□ -0.74
SF3B4-202ENST00000457312 MEOX2P50222 304 aa10.43□□□□□ -0.74
SF3B4-202ENST00000457312 OR10A3P58181 314 aa10.43□□□□□ -0.74
SF3B4-202ENST00000457312 GAMTQ14353 236 aa10.43□□□□□ -0.74
SF3B4-202ENST00000457312 C1orf194Q5T5A4 169 aa10.43□□□□□ -0.74
SF3B4-202ENST00000457312 MORN5Q5VZ52 161 aa10.43□□□□□ -0.74
SF3B4-202ENST00000457312 OR8G2PQ6IF36 304 aa10.43□□□□□ -0.74
SF3B4-202ENST00000457312 H2BFWTQ7Z2G1 175 aa10.43□□□□□ -0.74
SF3B4-202ENST00000457312 SLC24A4Q8NFF2 622 aa10.43□□□□□ -0.74
SF3B4-202ENST00000457312 IL22RA2Q969J5 263 aa10.43□□□□□ -0.74
SF3B4-202ENST00000457312 PBDC1Q9BVG4 233 aa10.43□□□□□ -0.74
SF3B4-202ENST00000457312 NXPH3O95157 252 aa10.42□□□□□ -0.74
SF3B4-202ENST00000457312 CRYBA4P53673 196 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms