RNA–Protein interactions for RNA: ENST00000456847.7

CPSF6-203, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 5 BASIC

Gene CPSF6, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-203ENST00000456847 U3KQE9 123 aa11.97□□□□□ -0.49
CPSF6-203ENST00000456847 MPTX1A8MV57 137 aa11.96□□□□□ -0.49
CPSF6-203ENST00000456847 H3BP45 60 aa11.96□□□□□ -0.49
CPSF6-203ENST00000456847 ZNF688P0C7X2 276 aa11.96□□□□□ -0.49
CPSF6-203ENST00000456847 CNPY1Q3B7I2 92 aa11.96□□□□□ -0.49
CPSF6-203ENST00000456847 SPANXN5Q5MJ07 72 aa11.96□□□□□ -0.49
CPSF6-203ENST00000456847 GLMPQ8WWB7 406 aa11.96□□□□□ -0.49
CPSF6-203ENST00000456847 RNF183Q96D59 192 aa11.96□□□□□ -0.49
CPSF6-203ENST00000456847 RNF125Q96EQ8 232 aa11.96□□□□□ -0.49
CPSF6-203ENST00000456847 CSTL1Q9H114 145 aa11.96□□□□□ -0.49
CPSF6-203ENST00000456847 NBEAL2Q6ZNJ1 2754 aa11.96□□□□□ -0.49
CPSF6-203ENST00000456847 LYRM1O43325 122 aa11.96□□□□□ -0.5
CPSF6-203ENST00000456847 NUP62P37198 522 aaPredicted RBP11.96□□□□□ -0.5
CPSF6-203ENST00000456847 LYZP61626 148 aa11.96□□□□□ -0.5
CPSF6-203ENST00000456847 STHQ8IWL8 128 aa11.96□□□□□ -0.5
CPSF6-203ENST00000456847 C20orf85Q9H1P6 137 aa11.96□□□□□ -0.5
CPSF6-203ENST00000456847 PFDN2Q9UHV9 154 aa11.96□□□□□ -0.5
CPSF6-203ENST00000456847 A0A0J9YWU9 116 aa11.95□□□□□ -0.5
CPSF6-203ENST00000456847 AP2S1P53680 142 aaPredicted RBP11.95□□□□□ -0.5
CPSF6-203ENST00000456847 ZNF90Q03938 601 aa11.95□□□□□ -0.5
CPSF6-203ENST00000456847 STRAPQ9Y3F4 350 aaKnown RBP11.95□□□□□ -0.5
CPSF6-203ENST00000456847 SCGB1D2O95969 90 aa11.94□□□□□ -0.5
CPSF6-203ENST00000456847 NKX2-1P43699 371 aaPredicted RBP11.94□□□□□ -0.5
CPSF6-203ENST00000456847 OR2F1Q13607 317 aa11.94□□□□□ -0.5
CPSF6-203ENST00000456847 SIGLEC15Q6ZMC9 328 aa11.94□□□□□ -0.5
CPSF6-203ENST00000456847 IGKV1D-37A0A075B6S9 117 aa11.94□□□□□ -0.5
CPSF6-203ENST00000456847 CA1P00915 261 aaPredicted RBP11.94□□□□□ -0.5
CPSF6-203ENST00000456847 POLR2GP62487 172 aaKnown RBP eCLIP11.94□□□□□ -0.5
CPSF6-203ENST00000456847 OR8G2PQ6IF36 304 aa11.94□□□□□ -0.5
CPSF6-203ENST00000456847 DCANP1Q8TF63 244 aa11.94□□□□□ -0.5
CPSF6-203ENST00000456847 PPP1R14BQ96C90 147 aa11.94□□□□□ -0.5
CPSF6-203ENST00000456847 PLA2G10O15496 165 aa11.93□□□□□ -0.5
CPSF6-203ENST00000456847 BUB3O43684 328 aa11.93□□□□□ -0.5
CPSF6-203ENST00000456847 SSSCA1O60232 199 aa11.93□□□□□ -0.5
CPSF6-203ENST00000456847 AKR1C1Q04828 323 aa11.93□□□□□ -0.5
CPSF6-203ENST00000456847 TRGV9Q99603 122 aa11.93□□□□□ -0.5
CPSF6-203ENST00000456847 CCDC32Q9BV29 185 aa11.93□□□□□ -0.5
CPSF6-203ENST00000456847 PSENENQ9NZ42 101 aa11.93□□□□□ -0.5
CPSF6-203ENST00000456847 ID3Q02535 119 aa11.92□□□□□ -0.5
CPSF6-203ENST00000456847 IAH1Q2TAA2 248 aaPredicted RBP11.92□□□□□ -0.5
CPSF6-203ENST00000456847 PSMG4Q5JS54 123 aa11.92□□□□□ -0.5
CPSF6-203ENST00000456847 OR4D5Q8NGN0 318 aa11.92□□□□□ -0.5
CPSF6-203ENST00000456847 TRAV6A0A075B6T7 132 aa11.92□□□□□ -0.5
CPSF6-203ENST00000456847 SMCO3A2RU48 225 aa11.92□□□□□ -0.5
CPSF6-203ENST00000456847 KNCNA6PVL3 124 aa11.92□□□□□ -0.5
CPSF6-203ENST00000456847 SNRPGP15A8MWD9 76 aa11.92□□□□□ -0.5
CPSF6-203ENST00000456847 PMS2P11Q13670 270 aa11.92□□□□□ -0.5
CPSF6-203ENST00000456847 THAP8Q8NA92 274 aa11.92□□□□□ -0.5
CPSF6-203ENST00000456847 GATAD1Q8WUU5 269 aa11.92□□□□□ -0.5
CPSF6-203ENST00000456847 NRN1Q9NPD7 142 aa11.92□□□□□ -0.5
CPSF6-203ENST00000456847 LCE6AA0A183 80 aa11.91□□□□□ -0.5
CPSF6-203ENST00000456847 CXorf65A6NEN9 183 aa11.91□□□□□ -0.5
CPSF6-203ENST00000456847 TCRBP04435 133 aa11.91□□□□□ -0.5
CPSF6-203ENST00000456847 SNRPD3P62318 126 aaKnown RBP11.91□□□□□ -0.5
CPSF6-203ENST00000456847 ACTL10Q5JWF8 245 aa11.91□□□□□ -0.5
CPSF6-203ENST00000456847 ACOT7LQ6ZUV0 252 aa11.91□□□□□ -0.5
CPSF6-203ENST00000456847 TMEM217Q8N7C4 229 aa11.91□□□□□ -0.5
CPSF6-203ENST00000456847 MITD1Q8WV92 249 aa11.91□□□□□ -0.5
CPSF6-203ENST00000456847 GSKIPQ9P0R6 139 aa11.91□□□□□ -0.5
CPSF6-203ENST00000456847 PRSS46E5RG02 174 aa11.9□□□□□ -0.5
CPSF6-203ENST00000456847 ZBTB8BQ8NAP8 495 aaPredicted RBP11.9□□□□□ -0.5
CPSF6-203ENST00000456847 S100ZQ8WXG8 99 aa11.9□□□□□ -0.5
CPSF6-203ENST00000456847 RARRES2Q99969 163 aa11.9□□□□□ -0.5
CPSF6-203ENST00000456847 NUDT15Q9NV35 164 aa11.9□□□□□ -0.5
CPSF6-203ENST00000456847 FBXL17Q9UF56 701 aa11.9□□□□□ -0.5
CPSF6-203ENST00000456847 IGKV1OR2-108A0A075B7D4 117 aa11.9□□□□□ -0.51
CPSF6-203ENST00000456847 TRPT1Q86TN4 253 aaKnown RBP11.9□□□□□ -0.51
CPSF6-203ENST00000456847 AGRNO00468 2067 aa11.89□□□□□ -0.51
CPSF6-203ENST00000456847 CCSO14618 274 aa11.89□□□□□ -0.51
CPSF6-203ENST00000456847 CFDP00746 253 aaPredicted RBP11.89□□□□□ -0.51
CPSF6-203ENST00000456847 ZNF846Q147U1 533 aa11.89□□□□□ -0.51
CPSF6-203ENST00000456847 BPIFCQ8NFQ6 507 aa11.89□□□□□ -0.51
CPSF6-203ENST00000456847 OR11H2Q8NH07 326 aa11.89□□□□□ -0.51
CPSF6-203ENST00000456847 SMIM8Q96KF7 97 aa11.89□□□□□ -0.51
CPSF6-203ENST00000456847 JTBO76095 146 aa11.88□□□□□ -0.51
CPSF6-203ENST00000456847 SPP1P10451 314 aa11.88□□□□□ -0.51
CPSF6-203ENST00000456847 EWSR1Q01844 656 aaKnown RBP eCLIP11.88□□□□□ -0.51
CPSF6-203ENST00000456847 MORN3Q6PF18 240 aaPredicted RBP11.88□□□□□ -0.51
CPSF6-203ENST00000456847 SEC22CQ9BRL7 303 aa11.88□□□□□ -0.51
CPSF6-203ENST00000456847 DYNC2H1Q8NCM8 4307 aaKnown RBP11.88□□□□□ -0.51
CPSF6-203ENST00000456847 FAM240BA0A1B0GVZ2 78 aa11.88□□□□□ -0.51
CPSF6-203ENST00000456847 FAM25EA8MYX2 175 aa11.88□□□□□ -0.51
CPSF6-203ENST00000456847 MZT2BQ6NZ67 158 aa11.88□□□□□ -0.51
CPSF6-203ENST00000456847 LINC00299Q6ZSB3 139 aa11.88□□□□□ -0.51
CPSF6-203ENST00000456847 OR8I2Q8N0Y5 310 aa11.88□□□□□ -0.51
CPSF6-203ENST00000456847 RAB40CQ96S21 281 aa11.88□□□□□ -0.51
CPSF6-203ENST00000456847 STARD9Q9P2P6 4700 aa11.87□□□□□ -0.51
CPSF6-203ENST00000456847 H2AFB2P0C5Z0 115 aa11.87□□□□□ -0.51
CPSF6-203ENST00000456847 METTL15P1P0C7V9 234 aa11.87□□□□□ -0.51
CPSF6-203ENST00000456847 RRAS2P62070 204 aaPredicted RBP11.87□□□□□ -0.51
CPSF6-203ENST00000456847 TMEM41BQ5BJD5 291 aa11.87□□□□□ -0.51
CPSF6-203ENST00000456847 C1orf194Q5T5A4 169 aa11.87□□□□□ -0.51
CPSF6-203ENST00000456847 ZNF431Q8TF32 576 aaPredicted RBP11.87□□□□□ -0.51
CPSF6-203ENST00000456847 SEPSECSQ9HD40 501 aaKnown RBP11.87□□□□□ -0.51
CPSF6-203ENST00000456847 CCNKO75909 580 aa11.86□□□□□ -0.51
CPSF6-203ENST00000456847 ORM2P19652 201 aa11.86□□□□□ -0.51
CPSF6-203ENST00000456847 GATA2P23769 480 aaPredicted RBP11.86□□□□□ -0.51
CPSF6-203ENST00000456847 TMEM144Q7Z5S9 345 aa11.86□□□□□ -0.51
CPSF6-203ENST00000456847 OR1B1Q8NGR6 318 aa11.86□□□□□ -0.51
CPSF6-203ENST00000456847 TMEM147Q9BVK8 224 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms