RNA–Protein interactions for RNA: ENST00000456174.6

HDAC9-218, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-218ENST00000456174 GAPTQ8N292 157 aa6.23□□□□□ -1.41
HDAC9-218ENST00000456174 OR4X2Q8NGF9 303 aa6.23□□□□□ -1.41
HDAC9-218ENST00000456174 URB1-AS1Q96HZ7 61 aa6.23□□□□□ -1.41
HDAC9-218ENST00000456174 ZNF488Q96MN9 340 aa6.23□□□□□ -1.41
HDAC9-218ENST00000456174 ANAPC13Q9BS18 74 aa6.23□□□□□ -1.41
HDAC9-218ENST00000456174 ZNF442Q9H7R0 627 aa6.23□□□□□ -1.41
HDAC9-218ENST00000456174 IL36RNQ9UBH0 155 aa6.23□□□□□ -1.41
HDAC9-218ENST00000456174 Q9UFV3 132 aa6.23□□□□□ -1.41
HDAC9-218ENST00000456174 FAM90A26D6RGX4 464 aa6.22□□□□□ -1.41
HDAC9-218ENST00000456174 J3QT63 122 aa6.22□□□□□ -1.41
HDAC9-218ENST00000456174 TUSC2O75896 110 aa6.22□□□□□ -1.41
HDAC9-218ENST00000456174 OR5AL1P0C617 328 aa6.22□□□□□ -1.41
HDAC9-218ENST00000456174 TEPPQ6URK8 271 aa6.22□□□□□ -1.41
HDAC9-218ENST00000456174 Q6ZRM9 215 aa6.22□□□□□ -1.41
HDAC9-218ENST00000456174 WDR86Q86TI4 376 aa6.22□□□□□ -1.41
HDAC9-218ENST00000456174 OR9G4Q8NGQ1 327 aa6.22□□□□□ -1.41
HDAC9-218ENST00000456174 ZNF502Q8TBZ5 544 aa6.22□□□□□ -1.41
HDAC9-218ENST00000456174 CHCHD1Q96BP2 118 aaKnown RBP6.22□□□□□ -1.41
HDAC9-218ENST00000456174 A0A1W2PRD5 423 aa6.22□□□□□ -1.41
HDAC9-218ENST00000456174 A0A1W2PRF3 423 aa6.22□□□□□ -1.41
HDAC9-218ENST00000456174 A0A1W2PRM7 423 aa6.22□□□□□ -1.41
HDAC9-218ENST00000456174 M0R1B8 84 aa6.22□□□□□ -1.41
HDAC9-218ENST00000456174 FAM27E3Q08E93 113 aa6.22□□□□□ -1.41
HDAC9-218ENST00000456174 WFDC2Q14508 124 aa6.22□□□□□ -1.41
HDAC9-218ENST00000456174 CR1LQ2VPA4 569 aa6.22□□□□□ -1.41
HDAC9-218ENST00000456174 PDLIM3Q53GG5 364 aaPredicted RBP6.22□□□□□ -1.41
HDAC9-218ENST00000456174 LRRC29Q8WV35 223 aa6.22□□□□□ -1.41
HDAC9-218ENST00000456174 CITED1Q99966 193 aa6.22□□□□□ -1.41
HDAC9-218ENST00000456174 TM2D2Q9BX73 214 aa6.22□□□□□ -1.41
HDAC9-218ENST00000456174 C1QTNF4Q9BXJ3 329 aa6.22□□□□□ -1.41
HDAC9-218ENST00000456174 NPCDR1Q9BY65 106 aa6.22□□□□□ -1.41
HDAC9-218ENST00000456174 TMEM133Q9H2Q1 129 aa6.22□□□□□ -1.41
HDAC9-218ENST00000456174 CACNG5Q9UF02 275 aa6.22□□□□□ -1.41
HDAC9-218ENST00000456174 RABAC1Q9UI14 185 aa6.22□□□□□ -1.41
HDAC9-218ENST00000456174 FZR1Q9UM11 496 aa6.22□□□□□ -1.41
HDAC9-218ENST00000456174 HILPDAQ9Y5L2 63 aa6.22□□□□□ -1.41
HDAC9-218ENST00000456174 TIMM8AO60220 97 aaPredicted RBP6.21□□□□□ -1.41
HDAC9-218ENST00000456174 FCGR2BP31994 310 aaPredicted RBP6.21□□□□□ -1.41
HDAC9-218ENST00000456174 TCL1AP56279 114 aa6.21□□□□□ -1.41
HDAC9-218ENST00000456174 SPANXN5Q5MJ07 72 aa6.21□□□□□ -1.41
HDAC9-218ENST00000456174 MBNL2Q5VZF2 373 aaKnown RBP6.21□□□□□ -1.41
HDAC9-218ENST00000456174 LINC00596Q86U02 117 aa6.21□□□□□ -1.41
HDAC9-218ENST00000456174 TEX45Q8NA69 505 aa6.21□□□□□ -1.41
HDAC9-218ENST00000456174 GTSF1Q8WW33 167 aa6.21□□□□□ -1.41
HDAC9-218ENST00000456174 ZNF331Q9NQX6 463 aaPredicted RBP6.21□□□□□ -1.41
HDAC9-218ENST00000456174 RP1L1Q8IWN7 2480 aaPredicted RBP6.21□□□□□ -1.42
HDAC9-218ENST00000456174 A0A087WX48 190 aa6.21□□□□□ -1.42
HDAC9-218ENST00000456174 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.21□□□□□ -1.42
HDAC9-218ENST00000456174 IGHV3-64DA0A0J9YX35 117 aa6.21□□□□□ -1.42
HDAC9-218ENST00000456174 PMS2P5A8MQ11 134 aa6.21□□□□□ -1.42
HDAC9-218ENST00000456174 SPINK4O60575 86 aa6.21□□□□□ -1.42
HDAC9-218ENST00000456174 PGLYRP1O75594 196 aaPredicted RBP6.21□□□□□ -1.42
HDAC9-218ENST00000456174 LEPROTL1O95214 131 aa6.21□□□□□ -1.42
HDAC9-218ENST00000456174 PF4P02776 101 aa6.21□□□□□ -1.42
HDAC9-218ENST00000456174 MT-ATP8P03928 68 aa6.21□□□□□ -1.42
HDAC9-218ENST00000456174 GRPP07492 148 aa6.21□□□□□ -1.42
HDAC9-218ENST00000456174 ATP5J2P56134 94 aa6.21□□□□□ -1.42
HDAC9-218ENST00000456174 TFF3Q07654 80 aa6.21□□□□□ -1.42
HDAC9-218ENST00000456174 C3orf36Q3SXR2 165 aa6.21□□□□□ -1.42
HDAC9-218ENST00000456174 Q6ZUT4 128 aa6.21□□□□□ -1.42
HDAC9-218ENST00000456174 LINC00173Q6ZV60 143 aa6.21□□□□□ -1.42
HDAC9-218ENST00000456174 OR1L1Q8NH94 360 aa6.21□□□□□ -1.42
HDAC9-218ENST00000456174 ATP6V0E2Q8NHE4 81 aa6.21□□□□□ -1.42
HDAC9-218ENST00000456174 DDB2Q92466 427 aa6.21□□□□□ -1.42
HDAC9-218ENST00000456174 RAB37Q96AX2 223 aa6.21□□□□□ -1.42
HDAC9-218ENST00000456174 SPANXA1Q9NS26 97 aa6.21□□□□□ -1.42
HDAC9-218ENST00000456174 VPREB3Q9UKI3 123 aa6.21□□□□□ -1.42
HDAC9-218ENST00000456174 POLDIP2Q9Y2S7 368 aa6.21□□□□□ -1.42
HDAC9-218ENST00000456174 IGF2RP11717 2491 aa6.2□□□□□ -1.42
HDAC9-218ENST00000456174 MAP1BP46821 2468 aaKnown RBP6.2□□□□□ -1.42
HDAC9-218ENST00000456174 IGKV1D-13A0A0B4J2D9 117 aa6.2□□□□□ -1.42
HDAC9-218ENST00000456174 IGHV1-24A0A0C4DH33 117 aa6.2□□□□□ -1.42
HDAC9-218ENST00000456174 FBLL1A6NHQ2 334 aaKnown RBP6.2□□□□□ -1.42
HDAC9-218ENST00000456174 HSPB6O14558 160 aa6.2□□□□□ -1.42
HDAC9-218ENST00000456174 WIPF1O43516 503 aa6.2□□□□□ -1.42
HDAC9-218ENST00000456174 SMIM13P0DJ93 91 aa6.2□□□□□ -1.42
HDAC9-218ENST00000456174 CT45A6P0DMU7 189 aa6.2□□□□□ -1.42
HDAC9-218ENST00000456174 CT45A5P0DMU8 189 aa6.2□□□□□ -1.42
HDAC9-218ENST00000456174 CT45A7P0DMV0 189 aa6.2□□□□□ -1.42
HDAC9-218ENST00000456174 IGKV1-13P0DP09 117 aa6.2□□□□□ -1.42
HDAC9-218ENST00000456174 AREGP15514 252 aa6.2□□□□□ -1.42
HDAC9-218ENST00000456174 RPL31P62899 125 aaKnown RBP6.2□□□□□ -1.42
HDAC9-218ENST00000456174 C5orf47Q569G3 176 aa6.2□□□□□ -1.42
HDAC9-218ENST00000456174 CT45A1Q5HYN5 189 aa6.2□□□□□ -1.42
HDAC9-218ENST00000456174 Q6ZR03 302 aa6.2□□□□□ -1.42
HDAC9-218ENST00000456174 C22orf34Q6ZV56 151 aa6.2□□□□□ -1.42
HDAC9-218ENST00000456174 Q8IYB0 196 aa6.2□□□□□ -1.42
HDAC9-218ENST00000456174 Q8N7P7 452 aa6.2□□□□□ -1.42
HDAC9-218ENST00000456174 CT45A3Q8NHU0 189 aa6.2□□□□□ -1.42
HDAC9-218ENST00000456174 MAP1LC3CQ9BXW4 147 aa6.2□□□□□ -1.42
HDAC9-218ENST00000456174 CXXC4Q9H2H0 198 aa6.2□□□□□ -1.42
HDAC9-218ENST00000456174 GCM1Q9NP62 436 aa6.2□□□□□ -1.42
HDAC9-218ENST00000456174 RALYQ9UKM9 306 aaKnown RBP6.2□□□□□ -1.42
HDAC9-218ENST00000456174 A1L4Q6 167 aa6.2□□□□□ -1.42
HDAC9-218ENST00000456174 CXorf1O96002 111 aa6.2□□□□□ -1.42
HDAC9-218ENST00000456174 NHLRC4P0CG21 123 aaPredicted RBP6.2□□□□□ -1.42
HDAC9-218ENST00000456174 ERVK11-1P61568 191 aa6.2□□□□□ -1.42
HDAC9-218ENST00000456174 ZNF146Q15072 292 aa6.2□□□□□ -1.42
HDAC9-218ENST00000456174 CCL28Q9NRJ3 127 aa6.2□□□□□ -1.42
HDAC9-218ENST00000456174 PRO0461Q9UI25 63 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 239 ms