RNA–Protein interactions for RNA: ENST00000455111.1

GPC1-206, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-206ENST00000455111 C11orf94C9JXX5 98 aa11.51□□□□□ -0.57
GPC1-206ENST00000455111 SOCS3O14543 225 aa11.51□□□□□ -0.57
GPC1-206ENST00000455111 GSTZ1O43708 216 aaPredicted RBP11.51□□□□□ -0.57
GPC1-206ENST00000455111 ZNF90Q03938 601 aa11.51□□□□□ -0.57
GPC1-206ENST00000455111 IL18Q14116 193 aa11.51□□□□□ -0.57
GPC1-206ENST00000455111 TMEM41BQ5BJD5 291 aa11.51□□□□□ -0.57
GPC1-206ENST00000455111 CLVS1Q8IUQ0 354 aaPredicted RBP11.51□□□□□ -0.57
GPC1-206ENST00000455111 IL22RA2Q969J5 263 aa11.51□□□□□ -0.57
GPC1-206ENST00000455111 MRPS26Q9BYN8 205 aaKnown RBP11.51□□□□□ -0.57
GPC1-206ENST00000455111 SLIRPQ9GZT3 109 aaKnown RBP11.51□□□□□ -0.57
GPC1-206ENST00000455111 SULT1A3P0DMM9 295 aa11.5□□□□□ -0.57
GPC1-206ENST00000455111 SULT1A4P0DMN0 295 aa11.5□□□□□ -0.57
GPC1-206ENST00000455111 TCTAP57738 103 aa11.5□□□□□ -0.57
GPC1-206ENST00000455111 SIGLEC15Q6ZMC9 328 aa11.5□□□□□ -0.57
GPC1-206ENST00000455111 GPR141Q7Z602 305 aa11.5□□□□□ -0.57
GPC1-206ENST00000455111 DIRAS2Q96HU8 199 aa11.5□□□□□ -0.57
GPC1-206ENST00000455111 NRN1Q9NPD7 142 aa11.5□□□□□ -0.57
GPC1-206ENST00000455111 XCL2Q9UBD3 114 aa11.5□□□□□ -0.57
GPC1-206ENST00000455111 IGKV1OR2-108A0A075B7D4 117 aa11.49□□□□□ -0.57
GPC1-206ENST00000455111 TRAV10A0A0B4J240 114 aa11.49□□□□□ -0.57
GPC1-206ENST00000455111 A0A1B0GVY2 172 aa11.49□□□□□ -0.57
GPC1-206ENST00000455111 PITX3O75364 302 aa11.49□□□□□ -0.57
GPC1-206ENST00000455111 RD3LP0DJH9 198 aa11.49□□□□□ -0.57
GPC1-206ENST00000455111 HLA-DRB4P13762 266 aa11.49□□□□□ -0.57
GPC1-206ENST00000455111 GAMTQ14353 236 aa11.49□□□□□ -0.57
GPC1-206ENST00000455111 ZNF705AQ6ZN79 300 aaPredicted RBP11.49□□□□□ -0.57
GPC1-206ENST00000455111 DTD1Q8TEA8 209 aa11.49□□□□□ -0.57
GPC1-206ENST00000455111 RNF125Q96EQ8 232 aa11.49□□□□□ -0.57
GPC1-206ENST00000455111 PRRT1Q99946 306 aa11.49□□□□□ -0.57
GPC1-206ENST00000455111 CCDC59Q9P031 241 aaKnown RBP11.49□□□□□ -0.57
GPC1-206ENST00000455111 HLA-DRB4X5D2U9 266 aa11.49□□□□□ -0.57
GPC1-206ENST00000455111 A0A0B4J2A0 478 aa11.48□□□□□ -0.57
GPC1-206ENST00000455111 FXYD7P58549 80 aa11.48□□□□□ -0.57
GPC1-206ENST00000455111 SMCO1Q147U7 214 aa11.48□□□□□ -0.57
GPC1-206ENST00000455111 ZNF709Q8N972 641 aa11.48□□□□□ -0.57
GPC1-206ENST00000455111 NARS2Q96I59 477 aaKnown RBP11.48□□□□□ -0.57
GPC1-206ENST00000455111 SEPSECSQ9HD40 501 aaKnown RBP11.48□□□□□ -0.57
GPC1-206ENST00000455111 SHPKQ9UHJ6 478 aa11.48□□□□□ -0.57
GPC1-206ENST00000455111 ZNF705FA8MVS1 300 aaPredicted RBP11.47□□□□□ -0.57
GPC1-206ENST00000455111 PRSS46E5RG02 174 aa11.47□□□□□ -0.57
GPC1-206ENST00000455111 IFNA10P01566 189 aa11.47□□□□□ -0.57
GPC1-206ENST00000455111 AMBPP02760 352 aa11.47□□□□□ -0.57
GPC1-206ENST00000455111 ZNF705DP0CH99 300 aaPredicted RBP11.47□□□□□ -0.57
GPC1-206ENST00000455111 ZNF705BP0CI00 300 aaPredicted RBP11.47□□□□□ -0.57
GPC1-206ENST00000455111 AKR1C4P17516 323 aa11.47□□□□□ -0.57
GPC1-206ENST00000455111 TNFSF8P32971 234 aa11.47□□□□□ -0.57
GPC1-206ENST00000455111 CCR6P51684 374 aa11.47□□□□□ -0.57
GPC1-206ENST00000455111 AP2S1P53680 142 aaPredicted RBP11.47□□□□□ -0.57
GPC1-206ENST00000455111 KLF9Q13886 244 aaPredicted RBP11.47□□□□□ -0.57
GPC1-206ENST00000455111 ETFRF1Q6IPR1 90 aa11.47□□□□□ -0.57
GPC1-206ENST00000455111 LGI3Q8N145 548 aa11.47□□□□□ -0.57
GPC1-206ENST00000455111 TRIM63Q969Q1 353 aa11.47□□□□□ -0.57
GPC1-206ENST00000455111 PLA2G2EQ9NZK7 142 aa11.47□□□□□ -0.57
GPC1-206ENST00000455111 F6UB75 175 aa11.46□□□□□ -0.57
GPC1-206ENST00000455111 IGKV3-20P01619 116 aa11.46□□□□□ -0.57
GPC1-206ENST00000455111 EIF2B2P49770 351 aaKnown RBP11.46□□□□□ -0.57
GPC1-206ENST00000455111 TMEM182Q6ZP80 229 aaPredicted RBP11.46□□□□□ -0.57
GPC1-206ENST00000455111 C20orf173Q96LM9 149 aa11.46□□□□□ -0.57
GPC1-206ENST00000455111 RNF126Q9BV68 326 aa11.46□□□□□ -0.57
GPC1-206ENST00000455111 U3KQ87 197 aa11.46□□□□□ -0.57
GPC1-206ENST00000455111 RYR1P21817 5038 aa11.46□□□□□ -0.58
GPC1-206ENST00000455111 DEFB131BA0A096LNP1 70 aa11.45□□□□□ -0.58
GPC1-206ENST00000455111 H3BMQ9 156 aa11.45□□□□□ -0.58
GPC1-206ENST00000455111 SCGB2A1O75556 95 aa11.45□□□□□ -0.58
GPC1-206ENST00000455111 NKX2-1P43699 371 aaPredicted RBP11.45□□□□□ -0.58
GPC1-206ENST00000455111 RAB2BQ8WUD1 216 aa11.45□□□□□ -0.58
GPC1-206ENST00000455111 PBDC1Q9BVG4 233 aa11.45□□□□□ -0.58
GPC1-206ENST00000455111 SLC35B3Q9H1N7 401 aa11.45□□□□□ -0.58
GPC1-206ENST00000455111 SAV1Q9H4B6 383 aaPredicted RBP11.45□□□□□ -0.58
GPC1-206ENST00000455111 RTL8CO15255 209 aa11.44□□□□□ -0.58
GPC1-206ENST00000455111 IAPPP10997 89 aa11.44□□□□□ -0.58
GPC1-206ENST00000455111 GPX4P36969 197 aaPredicted RBP11.44□□□□□ -0.58
GPC1-206ENST00000455111 TMBIM6P55061 237 aa11.44□□□□□ -0.58
GPC1-206ENST00000455111 OR2F1Q13607 317 aa11.44□□□□□ -0.58
GPC1-206ENST00000455111 ZNF79Q15937 498 aa11.44□□□□□ -0.58
GPC1-206ENST00000455111 C1orf158Q8N1D5 194 aa11.44□□□□□ -0.58
GPC1-206ENST00000455111 NEU1Q99519 415 aa11.44□□□□□ -0.58
GPC1-206ENST00000455111 MCUBQ9NWR8 336 aa11.44□□□□□ -0.58
GPC1-206ENST00000455111 KCNIP3Q9Y2W7 256 aa11.44□□□□□ -0.58
GPC1-206ENST00000455111 V9GYH0 126 aa11.44□□□□□ -0.58
GPC1-206ENST00000455111 ABCA13Q86UQ4 5058 aa11.43□□□□□ -0.58
GPC1-206ENST00000455111 SNRPD3P62318 126 aaKnown RBP11.43□□□□□ -0.58
GPC1-206ENST00000455111 OR8G2PQ6IF36 304 aa11.43□□□□□ -0.58
GPC1-206ENST00000455111 THAP8Q8NA92 274 aa11.43□□□□□ -0.58
GPC1-206ENST00000455111 SCP2D1Q9UJQ7 156 aa11.43□□□□□ -0.58
GPC1-206ENST00000455111 NACAE9PAV3 2078 aa11.43□□□□□ -0.58
GPC1-206ENST00000455111 ZFP92A6NM28 416 aa11.42□□□□□ -0.58
GPC1-206ENST00000455111 GATA2P23769 480 aaPredicted RBP11.42□□□□□ -0.58
GPC1-206ENST00000455111 LYZP61626 148 aa11.42□□□□□ -0.58
GPC1-206ENST00000455111 LRTM2Q8N967 370 aa11.42□□□□□ -0.58
GPC1-206ENST00000455111 OR1S1Q8NH92 325 aa11.42□□□□□ -0.58
GPC1-206ENST00000455111 LINC00052Q96N35 136 aa11.42□□□□□ -0.58
GPC1-206ENST00000455111 RABL2AQ9UBK7 228 aaPredicted RBP11.42□□□□□ -0.58
GPC1-206ENST00000455111 RSL24D1Q9UHA3 163 aaKnown RBP11.42□□□□□ -0.58
GPC1-206ENST00000455111 RABL2BQ9UNT1 228 aa11.42□□□□□ -0.58
GPC1-206ENST00000455111 FABP12A6NFH5 140 aa11.41□□□□□ -0.58
GPC1-206ENST00000455111 A8MTW9 85 aa11.41□□□□□ -0.58
GPC1-206ENST00000455111 PRM2P04554 102 aa11.41□□□□□ -0.58
GPC1-206ENST00000455111 PSMB3P49720 205 aa11.41□□□□□ -0.58
GPC1-206ENST00000455111 PAX9P55771 341 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms