RNA–Protein interactions for RNA: ENST00000454968.5

LINC00963-208, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best) BASIC

Gene LINC00963, Length 1,403 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-208ENST00000454968 PEF1Q9UBV8 284 aaKnown RBP12.82□□□□□ -0.36
LINC00963-208ENST00000454968 RD3LP0DJH9 198 aa12.81□□□□□ -0.36
LINC00963-208ENST00000454968 GATA2P23769 480 aaPredicted RBP12.81□□□□□ -0.36
LINC00963-208ENST00000454968 RAB5CP51148 216 aa12.81□□□□□ -0.36
LINC00963-208ENST00000454968 ZNF600Q6ZNG1 722 aa12.81□□□□□ -0.36
LINC00963-208ENST00000454968 ZFAND3Q9H8U3 227 aa12.81□□□□□ -0.36
LINC00963-208ENST00000454968 ADARB2-AS1A8MUL3 147 aa12.8□□□□□ -0.36
LINC00963-208ENST00000454968 IFNA7P01567 189 aa12.8□□□□□ -0.36
LINC00963-208ENST00000454968 MBP02144 154 aa12.8□□□□□ -0.36
LINC00963-208ENST00000454968 ARL3P36405 182 aa12.8□□□□□ -0.36
LINC00963-208ENST00000454968 ZNF616Q08AN1 781 aa12.8□□□□□ -0.36
LINC00963-208ENST00000454968 ZNF767PQ75MW2 155 aa12.8□□□□□ -0.36
LINC00963-208ENST00000454968 OR51G1Q8NGK1 321 aa12.8□□□□□ -0.36
LINC00963-208ENST00000454968 C19orf24Q9BVV8 132 aa12.8□□□□□ -0.36
LINC00963-208ENST00000454968 RPRMQ9NS64 109 aa12.8□□□□□ -0.36
LINC00963-208ENST00000454968 TSSC4Q9Y5U2 329 aaPredicted RBP12.8□□□□□ -0.36
LINC00963-208ENST00000454968 SEC14L6B5MCN3 397 aa12.79□□□□□ -0.36
LINC00963-208ENST00000454968 PPP5D1E7EU14 171 aa12.79□□□□□ -0.36
LINC00963-208ENST00000454968 GGCTO75223 188 aaKnown RBP12.79□□□□□ -0.36
LINC00963-208ENST00000454968 M6PRP20645 277 aa12.79□□□□□ -0.36
LINC00963-208ENST00000454968 RELQ04864 619 aaPredicted RBP12.79□□□□□ -0.36
LINC00963-208ENST00000454968 AWAT1Q58HT5 328 aa12.79□□□□□ -0.36
LINC00963-208ENST00000454968 FFAR4Q5NUL3 377 aa12.79□□□□□ -0.36
LINC00963-208ENST00000454968 DPPA3Q6W0C5 159 aa12.79□□□□□ -0.36
LINC00963-208ENST00000454968 RPP25LQ8N5L8 163 aaKnown RBP12.79□□□□□ -0.36
LINC00963-208ENST00000454968 TMEM37Q8WXS4 190 aa12.79□□□□□ -0.36
LINC00963-208ENST00000454968 CITED2Q99967 270 aaPredicted RBP12.79□□□□□ -0.36
LINC00963-208ENST00000454968 VSIRQ9H7M9 311 aa12.79□□□□□ -0.36
LINC00963-208ENST00000454968 HAX1O00165 279 aa12.79□□□□□ -0.36
LINC00963-208ENST00000454968 NDUFA4O00483 81 aa12.79□□□□□ -0.36
LINC00963-208ENST00000454968 HSPB1P04792 205 aaKnown RBP12.79□□□□□ -0.36
LINC00963-208ENST00000454968 TMEM41BQ5BJD5 291 aa12.79□□□□□ -0.36
LINC00963-208ENST00000454968 TOMM20LQ6UXN7 152 aa12.79□□□□□ -0.36
LINC00963-208ENST00000454968 PATE2Q6UY27 113 aa12.79□□□□□ -0.36
LINC00963-208ENST00000454968 Q6ZRG5 221 aa12.79□□□□□ -0.36
LINC00963-208ENST00000454968 C18orf65Q6ZTR6 163 aa12.79□□□□□ -0.36
LINC00963-208ENST00000454968 GPHB5Q86YW7 130 aa12.79□□□□□ -0.36
LINC00963-208ENST00000454968 Q8WTZ3 238 aa12.79□□□□□ -0.36
LINC00963-208ENST00000454968 GATAD1Q8WUU5 269 aa12.79□□□□□ -0.36
LINC00963-208ENST00000454968 MRPL27Q9P0M9 148 aaKnown RBP12.79□□□□□ -0.36
LINC00963-208ENST00000454968 UBQLN2Q9UHD9 624 aa12.79□□□□□ -0.36
LINC00963-208ENST00000454968 ELOA3CA0A087WX78 387 aaPredicted RBP12.78□□□□□ -0.36
LINC00963-208ENST00000454968 OR5G3P0C626 314 aa12.78□□□□□ -0.36
LINC00963-208ENST00000454968 FHL3Q13643 280 aa12.78□□□□□ -0.36
LINC00963-208ENST00000454968 ACOT6Q3I5F7 207 aaPredicted RBP12.78□□□□□ -0.36
LINC00963-208ENST00000454968 GCSAMLQ5JQS6 135 aa12.78□□□□□ -0.36
LINC00963-208ENST00000454968 FAM74A1Q5RGS3 127 aa12.78□□□□□ -0.36
LINC00963-208ENST00000454968 RNF141Q8WVD5 230 aa12.78□□□□□ -0.36
LINC00963-208ENST00000454968 RNF125Q96EQ8 232 aa12.78□□□□□ -0.36
LINC00963-208ENST00000454968 CITED1Q99966 193 aa12.78□□□□□ -0.36
LINC00963-208ENST00000454968 PUS1Q9Y606 427 aaKnown RBP eCLIP12.78□□□□□ -0.36
LINC00963-208ENST00000454968 ANKRD34BA5PLL1 514 aa12.77□□□□□ -0.37
LINC00963-208ENST00000454968 ELLP55199 621 aaPredicted RBP12.77□□□□□ -0.37
LINC00963-208ENST00000454968 RAB2AP61019 212 aa12.77□□□□□ -0.37
LINC00963-208ENST00000454968 USF2Q15853 346 aaPredicted RBP12.77□□□□□ -0.37
LINC00963-208ENST00000454968 AKR1C8PQ5T2L2 129 aa12.77□□□□□ -0.37
LINC00963-208ENST00000454968 LRRC20Q8TCA0 184 aa12.77□□□□□ -0.37
LINC00963-208ENST00000454968 SAT2Q96F10 170 aaPredicted RBP12.77□□□□□ -0.37
LINC00963-208ENST00000454968 PFDN5Q99471 154 aa12.77□□□□□ -0.37
LINC00963-208ENST00000454968 DNAJC4Q9NNZ3 241 aa12.77□□□□□ -0.37
LINC00963-208ENST00000454968 COL6A5A8TX70 2615 aa12.76□□□□□ -0.37
LINC00963-208ENST00000454968 IGHV4OR15-8A0A075B7B6 117 aa12.76□□□□□ -0.37
LINC00963-208ENST00000454968 A0A087WW49 117 aa12.76□□□□□ -0.37
LINC00963-208ENST00000454968 IL4P05112 153 aa12.76□□□□□ -0.37
LINC00963-208ENST00000454968 ZNF726P1Q15940 193 aa12.76□□□□□ -0.37
LINC00963-208ENST00000454968 NDUFA11Q86Y39 141 aa12.76□□□□□ -0.37
LINC00963-208ENST00000454968 KLHL30-AS1Q8NEE0 82 aa12.76□□□□□ -0.37
LINC00963-208ENST00000454968 OR10G4Q8NGN3 311 aa12.76□□□□□ -0.37
LINC00963-208ENST00000454968 OR10G9Q8NGN4 311 aa12.76□□□□□ -0.37
LINC00963-208ENST00000454968 OR10G7Q8NGN6 311 aa12.76□□□□□ -0.37
LINC00963-208ENST00000454968 OR1L4Q8NGR5 311 aa12.76□□□□□ -0.37
LINC00963-208ENST00000454968 LYPD6BQ8NI32 183 aa12.76□□□□□ -0.37
LINC00963-208ENST00000454968 TMEM190Q8WZ59 177 aa12.76□□□□□ -0.37
LINC00963-208ENST00000454968 RCC1LQ96I51 464 aaKnown RBP12.76□□□□□ -0.37
LINC00963-208ENST00000454968 OR5B12Q96R08 314 aa12.76□□□□□ -0.37
LINC00963-208ENST00000454968 LGALS9O00182 355 aa12.75□□□□□ -0.37
LINC00963-208ENST00000454968 HYPMO75409 117 aa12.75□□□□□ -0.37
LINC00963-208ENST00000454968 FHITP49789 147 aa12.75□□□□□ -0.37
LINC00963-208ENST00000454968 UNQ9165/PRO28630Q6UXU0 137 aa12.75□□□□□ -0.37
LINC00963-208ENST00000454968 REC114Q7Z4M0 266 aa12.75□□□□□ -0.37
LINC00963-208ENST00000454968 MBD3L1Q8WWY6 194 aa12.75□□□□□ -0.37
LINC00963-208ENST00000454968 RNF2Q99496 336 aa12.75□□□□□ -0.37
LINC00963-208ENST00000454968 MRPL32Q9BYC8 188 aaKnown RBP12.75□□□□□ -0.37
LINC00963-208ENST00000454968 SEPSECSQ9HD40 501 aaKnown RBP12.75□□□□□ -0.37
LINC00963-208ENST00000454968 U3KQE9 123 aa12.75□□□□□ -0.37
LINC00963-208ENST00000454968 A8MWP6 167 aa12.74□□□□□ -0.37
LINC00963-208ENST00000454968 NMBP08949 121 aa12.74□□□□□ -0.37
LINC00963-208ENST00000454968 ZP3P21754 424 aa12.74□□□□□ -0.37
LINC00963-208ENST00000454968 KLF5Q13887 457 aaPredicted RBP12.74□□□□□ -0.37
LINC00963-208ENST00000454968 C8orf86Q6ZUL3 223 aa12.74□□□□□ -0.37
LINC00963-208ENST00000454968 C11orf44Q8N8P7 122 aa12.74□□□□□ -0.37
LINC00963-208ENST00000454968 STAB1Q9NY15 2570 aa12.73□□□□□ -0.37
LINC00963-208ENST00000454968 TRAV1-1A0A0B4J248 108 aa12.73□□□□□ -0.37
LINC00963-208ENST00000454968 IGHV3-35A0A0C4DH35 117 aa12.73□□□□□ -0.37
LINC00963-208ENST00000454968 LINC01619G3V211 115 aa12.73□□□□□ -0.37
LINC00963-208ENST00000454968 K7EMT4 169 aa12.73□□□□□ -0.37
LINC00963-208ENST00000454968 CRYBB3P26998 211 aa12.73□□□□□ -0.37
LINC00963-208ENST00000454968 HOXD3P31249 432 aaPredicted RBP12.73□□□□□ -0.37
LINC00963-208ENST00000454968 LYZP61626 148 aa12.73□□□□□ -0.37
LINC00963-208ENST00000454968 C10orf113Q5VZT2 155 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 124 ms