RNA–Protein interactions for RNA: ENST00000454859.7

ECHDC1-210, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECHDC1, Length 2,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-210ENST00000454859 IMMP2LQ96T52 175 aa5.37□□□□□ -1.55
ECHDC1-210ENST00000454859 OR51M1Q9H341 326 aa5.37□□□□□ -1.55
ECHDC1-210ENST00000454859 SDF2L1Q9HCN8 221 aa5.37□□□□□ -1.55
ECHDC1-210ENST00000454859 BIN3Q9NQY0 253 aa5.37□□□□□ -1.55
ECHDC1-210ENST00000454859 FBXL7Q9UJT9 491 aa5.37□□□□□ -1.55
ECHDC1-210ENST00000454859 FLNBO75369 2602 aaKnown RBP5.37□□□□□ -1.55
ECHDC1-210ENST00000454859 SPTAN1Q13813 2472 aaKnown RBP5.36□□□□□ -1.55
ECHDC1-210ENST00000454859 TRBV6-1A0A0K0K1D8 114 aa5.36□□□□□ -1.55
ECHDC1-210ENST00000454859 ZNF727A8MUV8 499 aa5.36□□□□□ -1.55
ECHDC1-210ENST00000454859 TSPAN4O14817 238 aa5.36□□□□□ -1.55
ECHDC1-210ENST00000454859 ATP6V0E1O15342 81 aa5.36□□□□□ -1.55
ECHDC1-210ENST00000454859 PLXNB1O43157 2135 aa5.36□□□□□ -1.55
ECHDC1-210ENST00000454859 PAGE4O60829 102 aa5.36□□□□□ -1.55
ECHDC1-210ENST00000454859 MT-ND4LP03901 98 aa5.36□□□□□ -1.55
ECHDC1-210ENST00000454859 FGF8P55075 233 aaPredicted RBP5.36□□□□□ -1.55
ECHDC1-210ENST00000454859 TAS2R60P59551 318 aa5.36□□□□□ -1.55
ECHDC1-210ENST00000454859 NDPQ00604 133 aa5.36□□□□□ -1.55
ECHDC1-210ENST00000454859 RNF212Q495C1 297 aa5.36□□□□□ -1.55
ECHDC1-210ENST00000454859 OR4F5Q8NH21 305 aa5.36□□□□□ -1.55
ECHDC1-210ENST00000454859 OR4F4Q96R69 305 aa5.36□□□□□ -1.55
ECHDC1-210ENST00000454859 SHANK2-AS3Q9BTD1 123 aa5.36□□□□□ -1.55
ECHDC1-210ENST00000454859 PAXXQ9BUH6 204 aa5.36□□□□□ -1.55
ECHDC1-210ENST00000454859 TMUB1Q9BVT8 246 aa5.36□□□□□ -1.55
ECHDC1-210ENST00000454859 TMEM231Q9H6L2 316 aa5.36□□□□□ -1.55
ECHDC1-210ENST00000454859 VPREB3Q9UKI3 123 aa5.36□□□□□ -1.55
ECHDC1-210ENST00000454859 TRAV9-1A0A075B6T8 112 aa5.36□□□□□ -1.55
ECHDC1-210ENST00000454859 H3BUX3 64 aa5.36□□□□□ -1.55
ECHDC1-210ENST00000454859 BMPR1BO00238 502 aa5.36□□□□□ -1.55
ECHDC1-210ENST00000454859 AMY1AP04745 511 aa5.36□□□□□ -1.55
ECHDC1-210ENST00000454859 HIST1H1EP10412 219 aaKnown RBP5.36□□□□□ -1.55
ECHDC1-210ENST00000454859 PSG1P11464 419 aa5.36□□□□□ -1.55
ECHDC1-210ENST00000454859 HNF1AP20823 631 aa5.36□□□□□ -1.55
ECHDC1-210ENST00000454859 KRTAP10-9P60411 292 aa5.36□□□□□ -1.55
ECHDC1-210ENST00000454859 PRB3Q04118 309 aaPredicted RBP5.36□□□□□ -1.55
ECHDC1-210ENST00000454859 ATP5G2Q06055 141 aa5.36□□□□□ -1.55
ECHDC1-210ENST00000454859 MLANAQ16655 118 aa5.36□□□□□ -1.55
ECHDC1-210ENST00000454859 SAMD13Q5VXD3 122 aa5.36□□□□□ -1.55
ECHDC1-210ENST00000454859 RUSC1-AS1Q66K80 236 aa5.36□□□□□ -1.55
ECHDC1-210ENST00000454859 MIR17HGQ75NE6 70 aa5.36□□□□□ -1.55
ECHDC1-210ENST00000454859 LINC00305Q7Z4B0 112 aa5.36□□□□□ -1.55
ECHDC1-210ENST00000454859 BPIFA4PQ86YQ2 179 aa5.36□□□□□ -1.55
ECHDC1-210ENST00000454859 Q8N2B8 174 aa5.36□□□□□ -1.55
ECHDC1-210ENST00000454859 SMIM7Q9BQ49 75 aa5.36□□□□□ -1.55
ECHDC1-210ENST00000454859 SLC25A2Q9BXI2 301 aa5.36□□□□□ -1.55
ECHDC1-210ENST00000454859 ZNF355PQ9NSJ1 428 aa5.36□□□□□ -1.55
ECHDC1-210ENST00000454859 LRBAP50851 2863 aa5.35□□□□□ -1.55
ECHDC1-210ENST00000454859 C7orf77A4D0Y5 90 aa5.35□□□□□ -1.55
ECHDC1-210ENST00000454859 H3BRN7 92 aa5.35□□□□□ -1.55
ECHDC1-210ENST00000454859 CLDN34H7C241 214 aa5.35□□□□□ -1.55
ECHDC1-210ENST00000454859 CD5LO43866 347 aa5.35□□□□□ -1.55
ECHDC1-210ENST00000454859 OR7C2O60412 319 aa5.35□□□□□ -1.55
ECHDC1-210ENST00000454859 IGLV1-40P01703 118 aa5.35□□□□□ -1.55
ECHDC1-210ENST00000454859 RPL7P18124 248 aaKnown RBP5.35□□□□□ -1.55
ECHDC1-210ENST00000454859 PPIFP30405 207 aaKnown RBP5.35□□□□□ -1.55
ECHDC1-210ENST00000454859 RHOGP84095 191 aa5.35□□□□□ -1.55
ECHDC1-210ENST00000454859 ZNF90Q03938 601 aa5.35□□□□□ -1.55
ECHDC1-210ENST00000454859 ZNF343Q6P1L6 599 aa5.35□□□□□ -1.55
ECHDC1-210ENST00000454859 PATE2Q6UY27 113 aa5.35□□□□□ -1.55
ECHDC1-210ENST00000454859 ZNF491Q8N8L2 437 aa5.35□□□□□ -1.55
ECHDC1-210ENST00000454859 OR5AU1Q8NGC0 362 aa5.35□□□□□ -1.55
ECHDC1-210ENST00000454859 NRGNQ92686 78 aa5.35□□□□□ -1.55
ECHDC1-210ENST00000454859 RNF125Q96EQ8 232 aa5.35□□□□□ -1.55
ECHDC1-210ENST00000454859 HSPB9Q9BQS6 159 aa5.35□□□□□ -1.55
ECHDC1-210ENST00000454859 PRSS22Q9GZN4 317 aa5.35□□□□□ -1.55
ECHDC1-210ENST00000454859 NPFFR1Q9GZQ6 430 aa5.35□□□□□ -1.55
ECHDC1-210ENST00000454859 USP9YO00507 2555 aaPredicted RBP5.35□□□□□ -1.55
ECHDC1-210ENST00000454859 DNASE2O00115 360 aaPredicted RBP5.35□□□□□ -1.55
ECHDC1-210ENST00000454859 FOLR2P14207 255 aa5.35□□□□□ -1.55
ECHDC1-210ENST00000454859 CD24P25063 80 aa5.35□□□□□ -1.55
ECHDC1-210ENST00000454859 UBE2L3P68036 154 aaKnown RBP5.35□□□□□ -1.55
ECHDC1-210ENST00000454859 Q56UQ5 140 aa5.35□□□□□ -1.55
ECHDC1-210ENST00000454859 AWAT1Q58HT5 328 aa5.35□□□□□ -1.55
ECHDC1-210ENST00000454859 GCSAMLQ5JQS6 135 aa5.35□□□□□ -1.55
ECHDC1-210ENST00000454859 CST9LP1Q5W188 147 aa5.35□□□□□ -1.55
ECHDC1-210ENST00000454859 BRD3OSQ6XYD6 125 aa5.35□□□□□ -1.55
ECHDC1-210ENST00000454859 RNF152Q8N8N0 203 aa5.35□□□□□ -1.55
ECHDC1-210ENST00000454859 CHRDL1Q9BU40 450 aa5.35□□□□□ -1.55
ECHDC1-210ENST00000454859 SLC25A39Q9BZJ4 359 aaPredicted RBP5.35□□□□□ -1.55
ECHDC1-210ENST00000454859 OTORQ9NRC9 128 aa5.35□□□□□ -1.55
ECHDC1-210ENST00000454859 MRPL36Q9P0J6 103 aaKnown RBP5.35□□□□□ -1.55
ECHDC1-210ENST00000454859 M0R036 132 aa5.34□□□□□ -1.55
ECHDC1-210ENST00000454859 AVPP01185 164 aa5.34□□□□□ -1.55
ECHDC1-210ENST00000454859 IGHG4P01861 327 aa5.34□□□□□ -1.55
ECHDC1-210ENST00000454859 CTSGP08311 255 aa5.34□□□□□ -1.55
ECHDC1-210ENST00000454859 BMI1P35226 326 aa5.34□□□□□ -1.55
ECHDC1-210ENST00000454859 MYCNOSP40205 109 aa5.34□□□□□ -1.55
ECHDC1-210ENST00000454859 SLC35B1P78383 322 aa5.34□□□□□ -1.55
ECHDC1-210ENST00000454859 RPL19P84098 196 aaKnown RBP5.34□□□□□ -1.55
ECHDC1-210ENST00000454859 PSG9Q00887 426 aa5.34□□□□□ -1.55
ECHDC1-210ENST00000454859 CFHR3Q02985 330 aa5.34□□□□□ -1.55
ECHDC1-210ENST00000454859 C15orf32Q32M92 178 aa5.34□□□□□ -1.55
ECHDC1-210ENST00000454859 TIGITQ495A1 244 aa5.34□□□□□ -1.55
ECHDC1-210ENST00000454859 IQCF2Q8IXL9 164 aa5.34□□□□□ -1.55
ECHDC1-210ENST00000454859 C5orf17Q8NAS9 161 aa5.34□□□□□ -1.55
ECHDC1-210ENST00000454859 OR4F17Q8NGA8 305 aa5.34□□□□□ -1.55
ECHDC1-210ENST00000454859 OR1B1Q8NGR6 318 aa5.34□□□□□ -1.55
ECHDC1-210ENST00000454859 FXYD5Q96DB9 178 aa5.34□□□□□ -1.55
ECHDC1-210ENST00000454859 ELOVL1Q9BW60 279 aa5.34□□□□□ -1.55
ECHDC1-210ENST00000454859 PARLQ9H300 379 aa5.34□□□□□ -1.55
ECHDC1-210ENST00000454859 RABAC1Q9UI14 185 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms