RNA–Protein interactions for RNA: ENST00000454583.6

RIF1-207, Transcript of replication timing regulatory factor 1, humanhuman

TSL 2

Gene RIF1, Length 3,552 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-207ENST00000454583 ATP6V0E1O15342 81 aa3.79□□□□□ -1.8
RIF1-207ENST00000454583 IGKV1-17P01599 117 aa3.79□□□□□ -1.8
RIF1-207ENST00000454583 APOHP02749 345 aaPredicted RBP3.79□□□□□ -1.8
RIF1-207ENST00000454583 PVALBP20472 110 aaPredicted RBP3.79□□□□□ -1.8
RIF1-207ENST00000454583 CX3CL1P78423 397 aa3.79□□□□□ -1.8
RIF1-207ENST00000454583 MEF2BQ02080 365 aaPredicted RBP3.79□□□□□ -1.8
RIF1-207ENST00000454583 OR10G7Q8NGN6 311 aa3.79□□□□□ -1.8
RIF1-207ENST00000454583 SLC35D1Q9NTN3 355 aa3.79□□□□□ -1.8
RIF1-207ENST00000454583 MOB4Q9Y3A3 225 aa3.79□□□□□ -1.8
RIF1-207ENST00000454583 SMAD5-AS1Q9Y6J3 95 aa3.79□□□□□ -1.8
RIF1-207ENST00000454583 UBE2L5PA0A1B0GUS4 154 aa3.79□□□□□ -1.8
RIF1-207ENST00000454583 GGTLC3B5MD39 225 aa3.79□□□□□ -1.8
RIF1-207ENST00000454583 APOC3P02656 99 aa3.79□□□□□ -1.8
RIF1-207ENST00000454583 MT-ND4LP03901 98 aa3.79□□□□□ -1.8
RIF1-207ENST00000454583 IGLC1P0CG04 106 aa3.79□□□□□ -1.8
RIF1-207ENST00000454583 PSMB3P49720 205 aa3.79□□□□□ -1.8
RIF1-207ENST00000454583 HBG1P69891 147 aa3.79□□□□□ -1.8
RIF1-207ENST00000454583 HBG2P69892 147 aa3.79□□□□□ -1.8
RIF1-207ENST00000454583 PNRC1Q12796 327 aaPredicted RBP3.79□□□□□ -1.8
RIF1-207ENST00000454583 ACTL10Q5JWF8 245 aa3.79□□□□□ -1.8
RIF1-207ENST00000454583 H2BFWTQ7Z2G1 175 aa3.79□□□□□ -1.8
RIF1-207ENST00000454583 STX12Q86Y82 276 aa3.79□□□□□ -1.8
RIF1-207ENST00000454583 SIGLECL1Q8N7X8 197 aa3.79□□□□□ -1.8
RIF1-207ENST00000454583 ZNF491Q8N8L2 437 aa3.79□□□□□ -1.8
RIF1-207ENST00000454583 SLC24A4Q8NFF2 622 aa3.79□□□□□ -1.8
RIF1-207ENST00000454583 H1FXQ92522 213 aaKnown RBP3.79□□□□□ -1.8
RIF1-207ENST00000454583 TMEM68Q96MH6 324 aa3.79□□□□□ -1.8
RIF1-207ENST00000454583 TXNDC17Q9BRA2 123 aa3.79□□□□□ -1.8
RIF1-207ENST00000454583 F8W036 122 aa3.78□□□□□ -1.8
RIF1-207ENST00000454583 HOXA3O43365 443 aaPredicted RBP3.78□□□□□ -1.8
RIF1-207ENST00000454583 TOMM40O96008 361 aa3.78□□□□□ -1.8
RIF1-207ENST00000454583 HBE1P02100 147 aa3.78□□□□□ -1.8
RIF1-207ENST00000454583 MBP02144 154 aa3.78□□□□□ -1.8
RIF1-207ENST00000454583 CTSGP08311 255 aa3.78□□□□□ -1.8
RIF1-207ENST00000454583 RAB5AP20339 215 aa3.78□□□□□ -1.8
RIF1-207ENST00000454583 TAGLN2P37802 199 aaKnown RBP3.78□□□□□ -1.8
RIF1-207ENST00000454583 TMEM88Q6PEY1 159 aa3.78□□□□□ -1.8
RIF1-207ENST00000454583 TMEM217Q8N7C4 229 aa3.78□□□□□ -1.8
RIF1-207ENST00000454583 FAM213BQ8TBF2 198 aa3.78□□□□□ -1.8
RIF1-207ENST00000454583 FLYWCH2Q96CP2 140 aaKnown RBP3.78□□□□□ -1.8
RIF1-207ENST00000454583 PRSS22Q9GZN4 317 aa3.78□□□□□ -1.8
RIF1-207ENST00000454583 OR2C1O95371 312 aa3.78□□□□□ -1.8
RIF1-207ENST00000454583 GHRHP01286 108 aa3.78□□□□□ -1.8
RIF1-207ENST00000454583 YPEL3P61236 119 aaPredicted RBP3.78□□□□□ -1.8
RIF1-207ENST00000454583 SELENOTP62341 195 aa3.78□□□□□ -1.8
RIF1-207ENST00000454583 MLANAQ16655 118 aa3.78□□□□□ -1.8
RIF1-207ENST00000454583 FAM122CQ6P4D5 195 aa3.78□□□□□ -1.8
RIF1-207ENST00000454583 TRGV9Q99603 122 aa3.78□□□□□ -1.8
RIF1-207ENST00000454583 SLC25A33Q9BSK2 321 aa3.78□□□□□ -1.8
RIF1-207ENST00000454583 C19orf24Q9BVV8 132 aa3.78□□□□□ -1.8
RIF1-207ENST00000454583 NPVFQ9HCQ7 196 aa3.78□□□□□ -1.8
RIF1-207ENST00000454583 TMEM14CQ9P0S9 112 aa3.78□□□□□ -1.8
RIF1-207ENST00000454583 V9GYV3 84 aa3.78□□□□□ -1.8
RIF1-207ENST00000454583 TPRP12270 2363 aaKnown RBP3.78□□□□□ -1.8
RIF1-207ENST00000454583 MAP1LC3B2A6NCE7 125 aa3.78□□□□□ -1.8
RIF1-207ENST00000454583 TSPAN15O95858 294 aa3.78□□□□□ -1.8
RIF1-207ENST00000454583 IGLC2P0DOY2 106 aa3.78□□□□□ -1.8
RIF1-207ENST00000454583 CD24P25063 80 aa3.78□□□□□ -1.8
RIF1-207ENST00000454583 RPL8P62917 257 aaKnown RBP3.78□□□□□ -1.8
RIF1-207ENST00000454583 SPANXN5Q5MJ07 72 aa3.78□□□□□ -1.8
RIF1-207ENST00000454583 OR4X1Q8NH49 305 aa3.78□□□□□ -1.8
RIF1-207ENST00000454583 OR5R1Q8NH85 324 aa3.78□□□□□ -1.8
RIF1-207ENST00000454583 VN1R17PQ8TDU5 208 aa3.78□□□□□ -1.8
RIF1-207ENST00000454583 SRSF12Q8WXF0 261 aaKnown RBP3.78□□□□□ -1.8
RIF1-207ENST00000454583 TMEM190Q8WZ59 177 aa3.78□□□□□ -1.8
RIF1-207ENST00000454583 MAP1LC3BQ9GZQ8 125 aa3.78□□□□□ -1.8
RIF1-207ENST00000454583 SMCO4Q9NRQ5 59 aa3.78□□□□□ -1.8
RIF1-207ENST00000454583 SLC39A9Q9NUM3 307 aa3.78□□□□□ -1.8
RIF1-207ENST00000454583 SIGLEC8Q9NYZ4 499 aa3.78□□□□□ -1.8
RIF1-207ENST00000454583 SPTAN1Q13813 2472 aaKnown RBP3.78□□□□□ -1.81
RIF1-207ENST00000454583 DNAH5Q8TE73 4624 aa3.78□□□□□ -1.81
RIF1-207ENST00000454583 A0A1W2PPE2 198 aa3.77□□□□□ -1.81
RIF1-207ENST00000454583 C19orf71A6NCJ1 209 aa3.77□□□□□ -1.81
RIF1-207ENST00000454583 GCGP01275 180 aa3.77□□□□□ -1.81
RIF1-207ENST00000454583 FGF7P21781 194 aa3.77□□□□□ -1.81
RIF1-207ENST00000454583 OR2B11Q5JQS5 317 aa3.77□□□□□ -1.81
RIF1-207ENST00000454583 KPRPQ5T749 579 aaPredicted RBP3.77□□□□□ -1.81
RIF1-207ENST00000454583 CCDC144NLQ6NUI1 221 aa3.77□□□□□ -1.81
RIF1-207ENST00000454583 Q71RC1 249 aaPredicted RBP3.77□□□□□ -1.81
RIF1-207ENST00000454583 DERL1Q9BUN8 251 aa3.77□□□□□ -1.81
RIF1-207ENST00000454583 CTDSP1Q9GZU7 261 aa3.77□□□□□ -1.81
RIF1-207ENST00000454583 PARLQ9H300 379 aa3.77□□□□□ -1.81
RIF1-207ENST00000454583 FBXL15Q9H469 300 aa3.77□□□□□ -1.81
RIF1-207ENST00000454583 C19orf73Q9NVV2 129 aa3.77□□□□□ -1.81
RIF1-207ENST00000454583 GNG12Q9UBI6 72 aa3.77□□□□□ -1.81
RIF1-207ENST00000454583 PXMP4Q9Y6I8 212 aa3.77□□□□□ -1.81
RIF1-207ENST00000454583 RYR2Q92736 4967 aa3.77□□□□□ -1.81
RIF1-207ENST00000454583 MYO9AB2RTY4 2548 aa3.77□□□□□ -1.81
RIF1-207ENST00000454583 TCRBV4S1A1TA0A5B7 111 aa3.77□□□□□ -1.81
RIF1-207ENST00000454583 HIST1H2BKO60814 126 aa3.77□□□□□ -1.81
RIF1-207ENST00000454583 NDUFB4O95168 129 aa3.77□□□□□ -1.81
RIF1-207ENST00000454583 HIST1H2BJP06899 126 aa3.77□□□□□ -1.81
RIF1-207ENST00000454583 HOXA5P20719 270 aa3.77□□□□□ -1.81
RIF1-207ENST00000454583 EDN2P20800 178 aa3.77□□□□□ -1.81
RIF1-207ENST00000454583 HIST1H2BOP23527 126 aa3.77□□□□□ -1.81
RIF1-207ENST00000454583 HIST1H2BBP33778 126 aa3.77□□□□□ -1.81
RIF1-207ENST00000454583 ATP5G3P48201 142 aa3.77□□□□□ -1.81
RIF1-207ENST00000454583 HIST1H2BDP58876 126 aa3.77□□□□□ -1.81
RIF1-207ENST00000454583 HIST1H2BCP62807 126 aa3.77□□□□□ -1.81
RIF1-207ENST00000454583 HIST2H2BEQ16778 126 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms