RNA–Protein interactions for RNA: ENST00000454569.5

SCN9A-205, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,585 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-205ENST00000454569 PSMG3Q9BT73 122 aaPredicted RBP8.48□□□□□ -1.05
SCN9A-205ENST00000454569 GGTLC1Q9BX51 225 aa8.48□□□□□ -1.05
SCN9A-205ENST00000454569 NPCDR1Q9BY65 106 aa8.48□□□□□ -1.05
SCN9A-205ENST00000454569 THYN1Q9P016 225 aa8.48□□□□□ -1.05
SCN9A-205ENST00000454569 TMEM89A2RUT3 159 aa8.47□□□□□ -1.05
SCN9A-205ENST00000454569 FAM223BA6NKX1 122 aa8.47□□□□□ -1.05
SCN9A-205ENST00000454569 UMAD1C9J7I0 102 aa8.47□□□□□ -1.05
SCN9A-205ENST00000454569 FNDC10F2Z333 226 aa8.47□□□□□ -1.05
SCN9A-205ENST00000454569 EIF3GO75821 320 aaKnown RBP eCLIP8.47□□□□□ -1.05
SCN9A-205ENST00000454569 GPR183P32249 361 aa8.47□□□□□ -1.05
SCN9A-205ENST00000454569 CAMLGP49069 296 aa8.47□□□□□ -1.05
SCN9A-205ENST00000454569 RAB5CP51148 216 aa8.47□□□□□ -1.05
SCN9A-205ENST00000454569 SLC35B1P78383 322 aa8.47□□□□□ -1.05
SCN9A-205ENST00000454569 Q56UQ5 140 aa8.47□□□□□ -1.05
SCN9A-205ENST00000454569 GCSAMLQ5JQS6 135 aa8.47□□□□□ -1.05
SCN9A-205ENST00000454569 MIC13Q5XKP0 118 aa8.47□□□□□ -1.05
SCN9A-205ENST00000454569 ETFRF1Q6IPR1 90 aa8.47□□□□□ -1.05
SCN9A-205ENST00000454569 TEPPQ6URK8 271 aa8.47□□□□□ -1.05
SCN9A-205ENST00000454569 LURAP1LQ8IV03 231 aa8.47□□□□□ -1.05
SCN9A-205ENST00000454569 FAM223AQ8IWN6 122 aa8.47□□□□□ -1.05
SCN9A-205ENST00000454569 OR4X2Q8NGF9 303 aa8.47□□□□□ -1.05
SCN9A-205ENST00000454569 OR4F5Q8NH21 305 aa8.47□□□□□ -1.05
SCN9A-205ENST00000454569 SAT2Q96F10 170 aaPredicted RBP8.47□□□□□ -1.05
SCN9A-205ENST00000454569 SLC45A2Q9UMX9 530 aa8.47□□□□□ -1.05
SCN9A-205ENST00000454569 ZFP92A6NM28 416 aa8.46□□□□□ -1.06
SCN9A-205ENST00000454569 YIF1AO95070 293 aa8.46□□□□□ -1.06
SCN9A-205ENST00000454569 BLOC1S1P78537 153 aa8.46□□□□□ -1.06
SCN9A-205ENST00000454569 DEFB136Q30KP8 78 aa8.46□□□□□ -1.06
SCN9A-205ENST00000454569 AKR1C8PQ5T2L2 129 aa8.46□□□□□ -1.06
SCN9A-205ENST00000454569 ZNF343Q6P1L6 599 aa8.46□□□□□ -1.06
SCN9A-205ENST00000454569 Q6ZRG5 221 aa8.46□□□□□ -1.06
SCN9A-205ENST00000454569 BPIFCQ8NFQ6 507 aa8.46□□□□□ -1.06
SCN9A-205ENST00000454569 WFDC12Q8WWY7 111 aa8.46□□□□□ -1.06
SCN9A-205ENST00000454569 EEF1AKMT3Q96AZ1 226 aa8.46□□□□□ -1.06
SCN9A-205ENST00000454569 DUX3Q96PT4 197 aa8.46□□□□□ -1.06
SCN9A-205ENST00000454569 CITED2Q99967 270 aaPredicted RBP8.46□□□□□ -1.06
SCN9A-205ENST00000454569 MED9Q9NWA0 146 aa8.46□□□□□ -1.06
SCN9A-205ENST00000454569 TIMM9Q9Y5J7 89 aa8.46□□□□□ -1.06
SCN9A-205ENST00000454569 STAB1Q9NY15 2570 aa8.45□□□□□ -1.06
SCN9A-205ENST00000454569 IGHV3OR16-8A0A075B7F1 116 aa8.45□□□□□ -1.06
SCN9A-205ENST00000454569 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.45□□□□□ -1.06
SCN9A-205ENST00000454569 TCRBV4S1A1TA0A5B7 111 aa8.45□□□□□ -1.06
SCN9A-205ENST00000454569 C17orf112F2Z3M2 114 aa8.45□□□□□ -1.06
SCN9A-205ENST00000454569 I3L521 148 aa8.45□□□□□ -1.06
SCN9A-205ENST00000454569 CYB5BO43169 146 aa8.45□□□□□ -1.06
SCN9A-205ENST00000454569 GNG7O60262 68 aa8.45□□□□□ -1.06
SCN9A-205ENST00000454569 MPDU1O75352 247 aa8.45□□□□□ -1.06
SCN9A-205ENST00000454569 FCGR2BP31994 310 aaPredicted RBP8.45□□□□□ -1.06
SCN9A-205ENST00000454569 ZNF616Q08AN1 781 aa8.45□□□□□ -1.06
SCN9A-205ENST00000454569 ANKRD39Q53RE8 183 aa8.45□□□□□ -1.06
SCN9A-205ENST00000454569 PXDC1Q5TGL8 231 aa8.45□□□□□ -1.06
SCN9A-205ENST00000454569 CYP2G1PQ6ZSU1 146 aa8.45□□□□□ -1.06
SCN9A-205ENST00000454569 ZNF709Q8N972 641 aa8.45□□□□□ -1.06
SCN9A-205ENST00000454569 FAM213BQ8TBF2 198 aa8.45□□□□□ -1.06
SCN9A-205ENST00000454569 USMG5Q96IX5 58 aa8.45□□□□□ -1.06
SCN9A-205ENST00000454569 TRGV9Q99603 122 aa8.45□□□□□ -1.06
SCN9A-205ENST00000454569 VWFP04275 2813 aa8.45□□□□□ -1.06
SCN9A-205ENST00000454569 TRBV7-1A0A0A6YYK4 115 aa8.44□□□□□ -1.06
SCN9A-205ENST00000454569 A0A1W2PRX2 142 aa8.44□□□□□ -1.06
SCN9A-205ENST00000454569 TEX46H3BTG2 121 aa8.44□□□□□ -1.06
SCN9A-205ENST00000454569 BMPR1BO00238 502 aa8.44□□□□□ -1.06
SCN9A-205ENST00000454569 PSG1P11464 419 aa8.44□□□□□ -1.06
SCN9A-205ENST00000454569 NPBWR1P48145 328 aa8.44□□□□□ -1.06
SCN9A-205ENST00000454569 FHITP49789 147 aa8.44□□□□□ -1.06
SCN9A-205ENST00000454569 ELLP55199 621 aaPredicted RBP8.44□□□□□ -1.06
SCN9A-205ENST00000454569 SERF2P84101 59 aa8.44□□□□□ -1.06
SCN9A-205ENST00000454569 PATE2Q6UY27 113 aa8.44□□□□□ -1.06
SCN9A-205ENST00000454569 ARL6IP6Q8N6S5 226 aa8.44□□□□□ -1.06
SCN9A-205ENST00000454569 STPG3Q8N7X2 389 aa8.44□□□□□ -1.06
SCN9A-205ENST00000454569 PXMP4Q9Y6I8 212 aa8.44□□□□□ -1.06
SCN9A-205ENST00000454569 COL6A5A8TX70 2615 aa8.44□□□□□ -1.06
SCN9A-205ENST00000454569 A0A0G2JLM5 398 aa8.44□□□□□ -1.06
SCN9A-205ENST00000454569 TGOLN2O43493 480 aa8.44□□□□□ -1.06
SCN9A-205ENST00000454569 OR2C1O95371 312 aa8.44□□□□□ -1.06
SCN9A-205ENST00000454569 EDN2P20800 178 aa8.44□□□□□ -1.06
SCN9A-205ENST00000454569 RAB2AP61019 212 aa8.44□□□□□ -1.06
SCN9A-205ENST00000454569 DPPA3Q6W0C5 159 aa8.44□□□□□ -1.06
SCN9A-205ENST00000454569 SSX7Q7RTT5 188 aa8.44□□□□□ -1.06
SCN9A-205ENST00000454569 COMMD1Q8N668 190 aa8.44□□□□□ -1.06
SCN9A-205ENST00000454569 RCC1LQ96I51 464 aaKnown RBP8.44□□□□□ -1.06
SCN9A-205ENST00000454569 UBE2E2Q96LR5 201 aa8.44□□□□□ -1.06
SCN9A-205ENST00000454569 TXN2Q99757 166 aa8.44□□□□□ -1.06
SCN9A-205ENST00000454569 HRH4Q9H3N8 390 aa8.44□□□□□ -1.06
SCN9A-205ENST00000454569 KCNIP2Q9NS61 270 aa8.44□□□□□ -1.06
SCN9A-205ENST00000454569 IGHV4OR15-8A0A075B7B6 117 aa8.43□□□□□ -1.06
SCN9A-205ENST00000454569 A0A087WW49 117 aa8.43□□□□□ -1.06
SCN9A-205ENST00000454569 LGALS1P09382 135 aaKnown RBP8.43□□□□□ -1.06
SCN9A-205ENST00000454569 ARL3P36405 182 aa8.43□□□□□ -1.06
SCN9A-205ENST00000454569 CDX1P47902 265 aaPredicted RBP8.43□□□□□ -1.06
SCN9A-205ENST00000454569 RPL29P47914 159 aaKnown RBP8.43□□□□□ -1.06
SCN9A-205ENST00000454569 AWAT1Q58HT5 328 aa8.43□□□□□ -1.06
SCN9A-205ENST00000454569 TMEM41BQ5BJD5 291 aa8.43□□□□□ -1.06
SCN9A-205ENST00000454569 KHDC1LQ5JSQ8 128 aa8.43□□□□□ -1.06
SCN9A-205ENST00000454569 FFAR4Q5NUL3 377 aa8.43□□□□□ -1.06
SCN9A-205ENST00000454569 MORN5Q5VZ52 161 aa8.43□□□□□ -1.06
SCN9A-205ENST00000454569 SPATA31B1PQ5VZV4 182 aa8.43□□□□□ -1.06
SCN9A-205ENST00000454569 UNQ9165/PRO28630Q6UXU0 137 aa8.43□□□□□ -1.06
SCN9A-205ENST00000454569 TMEM37Q8WXS4 190 aa8.43□□□□□ -1.06
SCN9A-205ENST00000454569 SLC39A9Q9NUM3 307 aa8.43□□□□□ -1.06
SCN9A-205ENST00000454569 DOK5Q9P104 306 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 838.4 ms