RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 RLN2P04090 185 aa21.02■□□□□ 0.96
SMARCC1-203ENST00000454240 FABP1P07148 127 aa21.02■□□□□ 0.96
SMARCC1-203ENST00000454240 RRAS2P62070 204 aaPredicted RBP21.02■□□□□ 0.96
SMARCC1-203ENST00000454240 USF2Q15853 346 aaPredicted RBP21.02■□□□□ 0.96
SMARCC1-203ENST00000454240 GUCA2BQ16661 112 aa21.02■□□□□ 0.96
SMARCC1-203ENST00000454240 LRRC37A5PQ49AS3 106 aa21.02■□□□□ 0.96
SMARCC1-203ENST00000454240 LAMTOR1Q6IAA8 161 aa21.02■□□□□ 0.96
SMARCC1-203ENST00000454240 PPP1R1CQ8WVI7 109 aa21.02■□□□□ 0.96
SMARCC1-203ENST00000454240 ST8SIA2Q92186 375 aa21.02■□□□□ 0.96
SMARCC1-203ENST00000454240 U3KQE9 123 aa21.02■□□□□ 0.96
SMARCC1-203ENST00000454240 H0YIZ8 118 aa21.01■□□□□ 0.95
SMARCC1-203ENST00000454240 TSPAN4O14817 238 aa21.01■□□□□ 0.95
SMARCC1-203ENST00000454240 CXCL3P19876 107 aa21.01■□□□□ 0.95
SMARCC1-203ENST00000454240 BMI1P35226 326 aa21.01■□□□□ 0.95
SMARCC1-203ENST00000454240 FAM90A2PQ658T7 463 aa21.01■□□□□ 0.95
SMARCC1-203ENST00000454240 LILRB2Q8N423 598 aa21.01■□□□□ 0.95
SMARCC1-203ENST00000454240 TMEM252Q8N6L7 170 aa21.01■□□□□ 0.95
SMARCC1-203ENST00000454240 NPVFQ9HCQ7 196 aa21.01■□□□□ 0.95
SMARCC1-203ENST00000454240 SMCO3A2RU48 225 aa21■□□□□ 0.95
SMARCC1-203ENST00000454240 CST7O76096 145 aa21■□□□□ 0.95
SMARCC1-203ENST00000454240 GTSCR1Q86UQ5 136 aa21■□□□□ 0.95
SMARCC1-203ENST00000454240 RNF125Q96EQ8 232 aa21■□□□□ 0.95
SMARCC1-203ENST00000454240 MED28Q9H204 178 aa21■□□□□ 0.95
SMARCC1-203ENST00000454240 OR5AC2Q9NZP5 309 aa21■□□□□ 0.95
SMARCC1-203ENST00000454240 SMAD5-AS1Q9Y6J3 95 aa21■□□□□ 0.95
SMARCC1-203ENST00000454240 A0A1W2PS18 150 aa20.99■□□□□ 0.95
SMARCC1-203ENST00000454240 IGSF23A1L1A6 192 aa20.99■□□□□ 0.95
SMARCC1-203ENST00000454240 E5RGE8 158 aa20.99■□□□□ 0.95
SMARCC1-203ENST00000454240 HNRNPCP07910 306 aaKnown RBP eCLIP20.99■□□□□ 0.95
SMARCC1-203ENST00000454240 SULT1A1P50225 295 aa20.99■□□□□ 0.95
SMARCC1-203ENST00000454240 SPAG8Q99932 426 aaPredicted RBP20.99■□□□□ 0.95
SMARCC1-203ENST00000454240 IGHV3-66A0A0C4DH42 116 aa20.98■□□□□ 0.95
SMARCC1-203ENST00000454240 SLC38A11Q08AI6 406 aa20.98■□□□□ 0.95
SMARCC1-203ENST00000454240 OR2F1Q13607 317 aa20.98■□□□□ 0.95
SMARCC1-203ENST00000454240 FCN2Q15485 313 aa20.98■□□□□ 0.95
SMARCC1-203ENST00000454240 OR11H7Q8NGC8 314 aa20.98■□□□□ 0.95
SMARCC1-203ENST00000454240 RNF126Q9BV68 326 aa20.98■□□□□ 0.95
SMARCC1-203ENST00000454240 TMEM231Q9H6L2 316 aa20.98■□□□□ 0.95
SMARCC1-203ENST00000454240 MPC2O95563 127 aa20.97■□□□□ 0.95
SMARCC1-203ENST00000454240 CFDP00746 253 aaPredicted RBP20.97■□□□□ 0.95
SMARCC1-203ENST00000454240 CD5P06127 495 aa20.97■□□□□ 0.95
SMARCC1-203ENST00000454240 CD7P09564 240 aa20.97■□□□□ 0.95
SMARCC1-203ENST00000454240 P2RY1P47900 373 aa20.97■□□□□ 0.95
SMARCC1-203ENST00000454240 NARS2Q96I59 477 aaKnown RBP20.97■□□□□ 0.95
SMARCC1-203ENST00000454240 NEURL2Q9BR09 285 aa20.97■□□□□ 0.95
SMARCC1-203ENST00000454240 RABAC1Q9UI14 185 aa20.97■□□□□ 0.95
SMARCC1-203ENST00000454240 CD81P60033 236 aa20.96■□□□□ 0.95
SMARCC1-203ENST00000454240 TEPPQ6URK8 271 aa20.96■□□□□ 0.95
SMARCC1-203ENST00000454240 TMEM182Q6ZP80 229 aaPredicted RBP20.96■□□□□ 0.95
SMARCC1-203ENST00000454240 TCF24Q7RTU0 167 aa20.96■□□□□ 0.95
SMARCC1-203ENST00000454240 STX12Q86Y82 276 aa20.96■□□□□ 0.95
SMARCC1-203ENST00000454240 TMEM217Q8N7C4 229 aa20.96■□□□□ 0.95
SMARCC1-203ENST00000454240 DFFBO76075 338 aa20.95■□□□□ 0.94
SMARCC1-203ENST00000454240 S100A11P31949 105 aa20.95■□□□□ 0.94
SMARCC1-203ENST00000454240 CYP2G1PQ6ZSU1 146 aa20.95■□□□□ 0.94
SMARCC1-203ENST00000454240 PBDC1Q9BVG4 233 aa20.95■□□□□ 0.94
SMARCC1-203ENST00000454240 PET100P0DJ07 73 aa20.94■□□□□ 0.94
SMARCC1-203ENST00000454240 GATA2P23769 480 aaPredicted RBP20.94■□□□□ 0.94
SMARCC1-203ENST00000454240 EIF2B2P49770 351 aaKnown RBP20.94■□□□□ 0.94
SMARCC1-203ENST00000454240 BPIFCQ8NFQ6 507 aa20.94■□□□□ 0.94
SMARCC1-203ENST00000454240 SLC25A31Q9H0C2 315 aa20.94■□□□□ 0.94
SMARCC1-203ENST00000454240 A8MZ25 164 aa20.93■□□□□ 0.94
SMARCC1-203ENST00000454240 BUB3O43684 328 aa20.93■□□□□ 0.94
SMARCC1-203ENST00000454240 LYZP61626 148 aa20.93■□□□□ 0.94
SMARCC1-203ENST00000454240 HBG1P69891 147 aa20.93■□□□□ 0.94
SMARCC1-203ENST00000454240 HBG2P69892 147 aa20.93■□□□□ 0.94
SMARCC1-203ENST00000454240 VWC2Q2TAL6 325 aa20.93■□□□□ 0.94
SMARCC1-203ENST00000454240 C16orf54Q6UWD8 224 aa20.93■□□□□ 0.94
SMARCC1-203ENST00000454240 GRAMD2BQ96HH9 432 aa20.93■□□□□ 0.94
SMARCC1-203ENST00000454240 IGHV4-30-4P0DP06 118 aa20.92■□□□□ 0.94
SMARCC1-203ENST00000454240 SELENOTP62341 195 aa20.92■□□□□ 0.94
SMARCC1-203ENST00000454240 EWSR1Q01844 656 aaKnown RBP eCLIP20.92■□□□□ 0.94
SMARCC1-203ENST00000454240 NHLH2Q02577 135 aa20.92■□□□□ 0.94
SMARCC1-203ENST00000454240 B9D2Q9BPU9 175 aa20.92■□□□□ 0.94
SMARCC1-203ENST00000454240 UQCC1Q9NVA1 299 aa20.92■□□□□ 0.94
SMARCC1-203ENST00000454240 C19orf73Q9NVV2 129 aa20.92■□□□□ 0.94
SMARCC1-203ENST00000454240 ATP6V1FQ16864 119 aa20.91■□□□□ 0.94
SMARCC1-203ENST00000454240 STPG3Q8N7X2 389 aa20.91■□□□□ 0.94
SMARCC1-203ENST00000454240 GLMPQ8WWB7 406 aa20.91■□□□□ 0.94
SMARCC1-203ENST00000454240 IGKV3-7A0A075B6H7 116 aa20.9■□□□□ 0.94
SMARCC1-203ENST00000454240 OR4C46A6NHA9 309 aa20.9■□□□□ 0.94
SMARCC1-203ENST00000454240 LYL1P12980 280 aa20.9■□□□□ 0.94
SMARCC1-203ENST00000454240 TMEM147Q9BVK8 224 aa20.9■□□□□ 0.94
SMARCC1-203ENST00000454240 PFDN2Q9UHV9 154 aa20.9■□□□□ 0.94
SMARCC1-203ENST00000454240 DNAH9Q9NYC9 4486 aa20.89■□□□□ 0.93
SMARCC1-203ENST00000454240 OR11H12B2RN74 326 aa20.89■□□□□ 0.93
SMARCC1-203ENST00000454240 PAFAH1B2P68402 229 aa20.89■□□□□ 0.93
SMARCC1-203ENST00000454240 BAXQ07812 192 aa20.89■□□□□ 0.93
SMARCC1-203ENST00000454240 MGST2Q99735 147 aa20.89■□□□□ 0.93
SMARCC1-203ENST00000454240 MS4A6AQ9H2W1 248 aa20.89■□□□□ 0.93
SMARCC1-203ENST00000454240 MBD2Q9UBB5 411 aa20.89■□□□□ 0.93
SMARCC1-203ENST00000454240 SLC45A2Q9UMX9 530 aa20.89■□□□□ 0.93
SMARCC1-203ENST00000454240 WDR83OSQ9Y284 106 aa20.89■□□□□ 0.93
SMARCC1-203ENST00000454240 AGPAT2O15120 278 aa20.88■□□□□ 0.93
SMARCC1-203ENST00000454240 FRMD6-AS1P0C7T7 363 aa20.88■□□□□ 0.93
SMARCC1-203ENST00000454240 NUP62P37198 522 aaPredicted RBP20.88■□□□□ 0.93
SMARCC1-203ENST00000454240 PLP1P60201 277 aa20.88■□□□□ 0.93
SMARCC1-203ENST00000454240 RPL11P62913 178 aaKnown RBP20.88■□□□□ 0.93
SMARCC1-203ENST00000454240 GBGT1Q8N5D6 347 aa20.88■□□□□ 0.93
SMARCC1-203ENST00000454240 ASB13Q8WXK3 278 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms