RNA–Protein interactions for RNA: ENST00000453705.1

BRCC3-208, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 2,694 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-208ENST00000453705 PIGBOS1A0A0B4J2F0 54 aa6.22□□□□□ -1.41
BRCC3-208ENST00000453705 C5orf49A4QMS7 147 aa6.22□□□□□ -1.41
BRCC3-208ENST00000453705 CRLF1O75462 422 aa6.22□□□□□ -1.41
BRCC3-208ENST00000453705 KBTBD11O94819 623 aa6.22□□□□□ -1.41
BRCC3-208ENST00000453705 CYCSP99999 105 aaKnown RBP6.22□□□□□ -1.41
BRCC3-208ENST00000453705 IL15RAQ13261 267 aa6.22□□□□□ -1.41
BRCC3-208ENST00000453705 FAM57AQ8TBR7 257 aa6.22□□□□□ -1.41
BRCC3-208ENST00000453705 TMEM230Q96A57 120 aa6.22□□□□□ -1.41
BRCC3-208ENST00000453705 HIST1H2BLQ99880 126 aa6.22□□□□□ -1.41
BRCC3-208ENST00000453705 BANF2Q9H503 90 aa6.22□□□□□ -1.41
BRCC3-208ENST00000453705 DNAJC13O75165 2243 aa6.21□□□□□ -1.41
BRCC3-208ENST00000453705 A0A087WWC5 75 aa6.21□□□□□ -1.42
BRCC3-208ENST00000453705 MED19A0JLT2 244 aaPredicted RBP6.21□□□□□ -1.42
BRCC3-208ENST00000453705 PGLYRP1O75594 196 aaPredicted RBP6.21□□□□□ -1.42
BRCC3-208ENST00000453705 MOSP00540 346 aa6.21□□□□□ -1.42
BRCC3-208ENST00000453705 PATE4P0C8F1 98 aa6.21□□□□□ -1.42
BRCC3-208ENST00000453705 RPS10P46783 165 aaKnown RBP6.21□□□□□ -1.42
BRCC3-208ENST00000453705 CACNG7P62955 275 aa6.21□□□□□ -1.42
BRCC3-208ENST00000453705 GVQW1Q8N7I0 195 aa6.21□□□□□ -1.42
BRCC3-208ENST00000453705 STARD4Q96DR4 205 aa6.21□□□□□ -1.42
BRCC3-208ENST00000453705 MUCL1Q96DR8 90 aa6.21□□□□□ -1.42
BRCC3-208ENST00000453705 RTL8AQ9BWD3 113 aa6.21□□□□□ -1.42
BRCC3-208ENST00000453705 LYRM2Q9NU23 88 aaPredicted RBP6.21□□□□□ -1.42
BRCC3-208ENST00000453705 AK3Q9UIJ7 227 aa6.21□□□□□ -1.42
BRCC3-208ENST00000453705 USP24Q9UPU5 2620 aa6.21□□□□□ -1.42
BRCC3-208ENST00000453705 hADV38S2A0JD32 116 aa6.21□□□□□ -1.42
BRCC3-208ENST00000453705 CLDN14O95500 239 aa6.21□□□□□ -1.42
BRCC3-208ENST00000453705 TSPAN15O95858 294 aa6.21□□□□□ -1.42
BRCC3-208ENST00000453705 LMO1P25800 156 aa6.21□□□□□ -1.42
BRCC3-208ENST00000453705 RPS23P62266 143 aaKnown RBP6.21□□□□□ -1.42
BRCC3-208ENST00000453705 SLC25A31Q9H0C2 315 aa6.21□□□□□ -1.42
BRCC3-208ENST00000453705 ZNF286AQ9HBT8 521 aa6.21□□□□□ -1.42
BRCC3-208ENST00000453705 PROCRQ9UNN8 238 aa6.21□□□□□ -1.42
BRCC3-208ENST00000453705 SLC25A15Q9Y619 301 aa6.21□□□□□ -1.42
BRCC3-208ENST00000453705 TANC2Q9HCD6 1990 aa6.2□□□□□ -1.42
BRCC3-208ENST00000453705 H3BP45 60 aa6.2□□□□□ -1.42
BRCC3-208ENST00000453705 FABP4P15090 132 aa6.2□□□□□ -1.42
BRCC3-208ENST00000453705 UBE2NP61088 152 aaKnown RBP6.2□□□□□ -1.42
BRCC3-208ENST00000453705 ZNF146Q15072 292 aa6.2□□□□□ -1.42
BRCC3-208ENST00000453705 OR4S1Q8NGB4 309 aa6.2□□□□□ -1.42
BRCC3-208ENST00000453705 ABHD14BQ96IU4 210 aa6.2□□□□□ -1.42
BRCC3-208ENST00000453705 SCRT1Q9BWW7 348 aa6.2□□□□□ -1.42
BRCC3-208ENST00000453705 SMDT1Q9H4I9 107 aa6.2□□□□□ -1.42
BRCC3-208ENST00000453705 NAT8BQ9UHF3 227 aa6.2□□□□□ -1.42
BRCC3-208ENST00000453705 IGKV1D-8A0A087WSZ0 117 aa6.2□□□□□ -1.42
BRCC3-208ENST00000453705 CRYM-AS1A6NIL9 109 aa6.2□□□□□ -1.42
BRCC3-208ENST00000453705 MRPS12O15235 138 aaKnown RBP6.2□□□□□ -1.42
BRCC3-208ENST00000453705 ARL16Q0P5N6 197 aa6.2□□□□□ -1.42
BRCC3-208ENST00000453705 ARFRP1Q13795 201 aa6.2□□□□□ -1.42
BRCC3-208ENST00000453705 Q6P435 159 aa6.2□□□□□ -1.42
BRCC3-208ENST00000453705 MAPKAPK5-AS1Q8N8E1 139 aa6.2□□□□□ -1.42
BRCC3-208ENST00000453705 NEXN-AS1Q8NBZ9 246 aa6.2□□□□□ -1.42
BRCC3-208ENST00000453705 PBDC1Q9BVG4 233 aa6.2□□□□□ -1.42
BRCC3-208ENST00000453705 MRPL18Q9H0U6 180 aaKnown RBP6.2□□□□□ -1.42
BRCC3-208ENST00000453705 SPANXA1Q9NS26 97 aa6.2□□□□□ -1.42
BRCC3-208ENST00000453705 FAM215AQ9Y5M1 114 aa6.2□□□□□ -1.42
BRCC3-208ENST00000453705 MEIS3P1A6NDR6 274 aa6.19□□□□□ -1.42
BRCC3-208ENST00000453705 H0YIZ8 118 aa6.19□□□□□ -1.42
BRCC3-208ENST00000453705 NDUFB8O95169 186 aa6.19□□□□□ -1.42
BRCC3-208ENST00000453705 SUPT4H1P63272 117 aaKnown RBP6.19□□□□□ -1.42
BRCC3-208ENST00000453705 HERPUD1Q15011 391 aa6.19□□□□□ -1.42
BRCC3-208ENST00000453705 COA6Q5JTJ3 125 aaKnown RBP6.19□□□□□ -1.42
BRCC3-208ENST00000453705 GFI1BQ5VTD9 330 aa6.19□□□□□ -1.42
BRCC3-208ENST00000453705 OR8S1Q8NH09 359 aa6.19□□□□□ -1.42
BRCC3-208ENST00000453705 PPP1R1CQ8WVI7 109 aa6.19□□□□□ -1.42
BRCC3-208ENST00000453705 PSMG3Q9BT73 122 aaPredicted RBP6.19□□□□□ -1.42
BRCC3-208ENST00000453705 CXorf1O96002 111 aa6.19□□□□□ -1.42
BRCC3-208ENST00000453705 HPRT1P00492 218 aa6.19□□□□□ -1.42
BRCC3-208ENST00000453705 PSG2P11465 335 aa6.19□□□□□ -1.42
BRCC3-208ENST00000453705 TMEM241Q24JQ0 296 aa6.19□□□□□ -1.42
BRCC3-208ENST00000453705 PVRIGQ6DKI7 326 aa6.19□□□□□ -1.42
BRCC3-208ENST00000453705 C6orf201Q7Z4U5 140 aa6.19□□□□□ -1.42
BRCC3-208ENST00000453705 GPR146Q96CH1 333 aa6.19□□□□□ -1.42
BRCC3-208ENST00000453705 FMC1Q96HJ9 113 aa6.19□□□□□ -1.42
BRCC3-208ENST00000453705 ESPL1Q14674 2120 aa6.18□□□□□ -1.42
BRCC3-208ENST00000453705 TRGV11A0A075B6L2 103 aa6.18□□□□□ -1.42
BRCC3-208ENST00000453705 hDV102S1A0JD36 115 aa6.18□□□□□ -1.42
BRCC3-208ENST00000453705 C8orf87E5RJ46 101 aa6.18□□□□□ -1.42
BRCC3-208ENST00000453705 GEMIN2O14893 280 aaKnown RBP6.18□□□□□ -1.42
BRCC3-208ENST00000453705 IGHV3-9P01782 118 aa6.18□□□□□ -1.42
BRCC3-208ENST00000453705 BCL3P20749 454 aa6.18□□□□□ -1.42
BRCC3-208ENST00000453705 LPAR6P43657 344 aa6.18□□□□□ -1.42
BRCC3-208ENST00000453705 SRPXP78539 464 aa6.18□□□□□ -1.42
BRCC3-208ENST00000453705 IBA57Q5T440 356 aaKnown RBP6.18□□□□□ -1.42
BRCC3-208ENST00000453705 Q6ZPA2 131 aa6.18□□□□□ -1.42
BRCC3-208ENST00000453705 SLC25A26Q70HW3 274 aa6.18□□□□□ -1.42
BRCC3-208ENST00000453705 ODF3L1Q8IXM7 274 aa6.18□□□□□ -1.42
BRCC3-208ENST00000453705 TMEM183AQ8IXX5 376 aa6.18□□□□□ -1.42
BRCC3-208ENST00000453705 EHFQ9NZC4 300 aa6.18□□□□□ -1.42
BRCC3-208ENST00000453705 IGLV3-9A0A075B6K5 115 aa6.18□□□□□ -1.42
BRCC3-208ENST00000453705 K7EM74 188 aa6.18□□□□□ -1.42
BRCC3-208ENST00000453705 GPR6P46095 362 aaPredicted RBP6.18□□□□□ -1.42
BRCC3-208ENST00000453705 RPL18AQ02543 176 aaKnown RBP6.18□□□□□ -1.42
BRCC3-208ENST00000453705 ELOBQ15370 118 aa6.18□□□□□ -1.42
BRCC3-208ENST00000453705 OR2T2Q6IF00 324 aa6.18□□□□□ -1.42
BRCC3-208ENST00000453705 SLC35E1Q96K37 410 aa6.18□□□□□ -1.42
BRCC3-208ENST00000453705 VAX2Q9UIW0 290 aa6.18□□□□□ -1.42
BRCC3-208ENST00000453705 TRAV39A0A0B4J263 110 aa6.17□□□□□ -1.42
BRCC3-208ENST00000453705 IGHV2OR16-5A0A0B4J2B6 119 aa6.17□□□□□ -1.42
BRCC3-208ENST00000453705 RBMY1BA6NDE4 496 aaKnown RBP6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms