RNA–Protein interactions for RNA: ENST00000453580.1

TNFRSF4-202, Transcript of TNF receptor superfamily member 4, humanhuman

TSL 3

Gene TNFRSF4, Length 393 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4-202ENST00000453580 TMEM170AQ8WVE7 144 aa12.53□□□□□ -0.4
TNFRSF4-202ENST00000453580 GLMPQ8WWB7 406 aa12.53□□□□□ -0.4
TNFRSF4-202ENST00000453580 NRN1Q9NPD7 142 aa12.53□□□□□ -0.4
TNFRSF4-202ENST00000453580 PRR13Q9NZ81 148 aa12.53□□□□□ -0.4
TNFRSF4-202ENST00000453580 FBXL17Q9UF56 701 aa12.53□□□□□ -0.4
TNFRSF4-202ENST00000453580 BUB3O43684 328 aa12.52□□□□□ -0.41
TNFRSF4-202ENST00000453580 ZNF688P0C7X2 276 aa12.52□□□□□ -0.41
TNFRSF4-202ENST00000453580 PSG1P11464 419 aa12.52□□□□□ -0.41
TNFRSF4-202ENST00000453580 TRPT1Q86TN4 253 aaKnown RBP12.52□□□□□ -0.41
TNFRSF4-202ENST00000453580 C11orf45Q8TAV5 145 aa12.52□□□□□ -0.41
TNFRSF4-202ENST00000453580 RNF125Q96EQ8 232 aa12.52□□□□□ -0.41
TNFRSF4-202ENST00000453580 C1QTNF4Q9BXJ3 329 aa12.52□□□□□ -0.41
TNFRSF4-202ENST00000453580 RYR3Q15413 4870 aa12.52□□□□□ -0.41
TNFRSF4-202ENST00000453580 CENPXA8MT69 81 aa12.51□□□□□ -0.41
TNFRSF4-202ENST00000453580 SNRPGP15A8MWD9 76 aa12.51□□□□□ -0.41
TNFRSF4-202ENST00000453580 PITX3O75364 302 aa12.51□□□□□ -0.41
TNFRSF4-202ENST00000453580 SFT2D2O95562 160 aa12.51□□□□□ -0.41
TNFRSF4-202ENST00000453580 USF2Q15853 346 aaPredicted RBP12.51□□□□□ -0.41
TNFRSF4-202ENST00000453580 ZNF79Q15937 498 aa12.51□□□□□ -0.41
TNFRSF4-202ENST00000453580 SAMD13Q5VXD3 122 aa12.51□□□□□ -0.41
TNFRSF4-202ENST00000453580 TRIQKQ629K1 86 aa12.51□□□□□ -0.41
TNFRSF4-202ENST00000453580 CSMD3Q7Z407 3707 aa12.5□□□□□ -0.41
TNFRSF4-202ENST00000453580 MIFP14174 115 aa12.5□□□□□ -0.41
TNFRSF4-202ENST00000453580 ID1P41134 155 aa12.5□□□□□ -0.41
TNFRSF4-202ENST00000453580 TCTAP57738 103 aa12.5□□□□□ -0.41
TNFRSF4-202ENST00000453580 GAMTQ14353 236 aa12.5□□□□□ -0.41
TNFRSF4-202ENST00000453580 C1orf194Q5T5A4 169 aa12.5□□□□□ -0.41
TNFRSF4-202ENST00000453580 GGNBP1Q5YKI7 109 aa12.5□□□□□ -0.41
TNFRSF4-202ENST00000453580 FAM24BQ8N5W8 94 aa12.5□□□□□ -0.41
TNFRSF4-202ENST00000453580 PHLDA1Q8WV24 401 aaPredicted RBP12.5□□□□□ -0.41
TNFRSF4-202ENST00000453580 LINC00476Q8WZB0 136 aa12.5□□□□□ -0.41
TNFRSF4-202ENST00000453580 SYNGR2O43760 224 aa12.49□□□□□ -0.41
TNFRSF4-202ENST00000453580 CNPY1Q3B7I2 92 aa12.49□□□□□ -0.41
TNFRSF4-202ENST00000453580 PSMG4Q5JS54 123 aa12.49□□□□□ -0.41
TNFRSF4-202ENST00000453580 ACTL10Q5JWF8 245 aa12.49□□□□□ -0.41
TNFRSF4-202ENST00000453580 TRGV9Q99603 122 aa12.49□□□□□ -0.41
TNFRSF4-202ENST00000453580 PBDC1Q9BVG4 233 aa12.49□□□□□ -0.41
TNFRSF4-202ENST00000453580 PAIP2BQ9ULR5 123 aaKnown RBP12.49□□□□□ -0.41
TNFRSF4-202ENST00000453580 C11orf94C9JXX5 98 aa12.48□□□□□ -0.41
TNFRSF4-202ENST00000453580 LY6G6CO95867 125 aa12.48□□□□□ -0.41
TNFRSF4-202ENST00000453580 IFNA21P01568 189 aa12.48□□□□□ -0.41
TNFRSF4-202ENST00000453580 EWSR1Q01844 656 aaKnown RBP eCLIP12.48□□□□□ -0.41
TNFRSF4-202ENST00000453580 PPP1R1AQ13522 171 aa12.48□□□□□ -0.41
TNFRSF4-202ENST00000453580 COQ8AQ8NI60 647 aa12.48□□□□□ -0.41
TNFRSF4-202ENST00000453580 PPP1R14BQ96C90 147 aa12.48□□□□□ -0.41
TNFRSF4-202ENST00000453580 RAB40CQ96S21 281 aa12.48□□□□□ -0.41
TNFRSF4-202ENST00000453580 C7orf50Q9BRJ6 194 aaKnown RBP12.48□□□□□ -0.41
TNFRSF4-202ENST00000453580 RBM38Q9H0Z9 239 aaKnown RBP12.48□□□□□ -0.41
TNFRSF4-202ENST00000453580 HRH4Q9H3N8 390 aa12.48□□□□□ -0.41
TNFRSF4-202ENST00000453580 DYNC2H1Q8NCM8 4307 aaKnown RBP12.48□□□□□ -0.41
TNFRSF4-202ENST00000453580 NKX2-1P43699 371 aaPredicted RBP12.47□□□□□ -0.41
TNFRSF4-202ENST00000453580 SRRQ9GZT4 340 aa12.47□□□□□ -0.41
TNFRSF4-202ENST00000453580 SLC45A2Q9UMX9 530 aa12.47□□□□□ -0.41
TNFRSF4-202ENST00000453580 KNCNA6PVL3 124 aa12.46□□□□□ -0.41
TNFRSF4-202ENST00000453580 WRBO00258 174 aa12.46□□□□□ -0.41
TNFRSF4-202ENST00000453580 HOXB5P09067 269 aa12.46□□□□□ -0.41
TNFRSF4-202ENST00000453580 IAPPP10997 89 aa12.46□□□□□ -0.41
TNFRSF4-202ENST00000453580 MEOX2P50222 304 aa12.46□□□□□ -0.41
TNFRSF4-202ENST00000453580 LYZP61626 148 aa12.46□□□□□ -0.41
TNFRSF4-202ENST00000453580 SPATA31B1PQ5VZV4 182 aa12.46□□□□□ -0.41
TNFRSF4-202ENST00000453580 STRAPQ9Y3F4 350 aaKnown RBP12.46□□□□□ -0.41
TNFRSF4-202ENST00000453580 AGRNO00468 2067 aa12.46□□□□□ -0.42
TNFRSF4-202ENST00000453580 NDUFB6O95139 128 aa12.45□□□□□ -0.42
TNFRSF4-202ENST00000453580 PSMB3P49720 205 aa12.45□□□□□ -0.42
TNFRSF4-202ENST00000453580 S100A7AQ86SG5 101 aa12.45□□□□□ -0.42
TNFRSF4-202ENST00000453580 OR8I2Q8N0Y5 310 aa12.45□□□□□ -0.42
TNFRSF4-202ENST00000453580 THAP8Q8NA92 274 aa12.45□□□□□ -0.42
TNFRSF4-202ENST00000453580 NDUFA13Q9P0J0 144 aa12.45□□□□□ -0.42
TNFRSF4-202ENST00000453580 TBC1D24Q9ULP9 559 aa12.45□□□□□ -0.42
TNFRSF4-202ENST00000453580 IGKV1D-37A0A075B6S9 117 aa12.44□□□□□ -0.42
TNFRSF4-202ENST00000453580 C9orf170A2RU37 121 aa12.44□□□□□ -0.42
TNFRSF4-202ENST00000453580 ZNF705EA8MWA4 302 aaPredicted RBP12.44□□□□□ -0.42
TNFRSF4-202ENST00000453580 ZNF90Q03938 601 aa12.44□□□□□ -0.42
TNFRSF4-202ENST00000453580 SPANXN5Q5MJ07 72 aa12.44□□□□□ -0.42
TNFRSF4-202ENST00000453580 BPIFCQ8NFQ6 507 aa12.44□□□□□ -0.42
TNFRSF4-202ENST00000453580 C2CD4CQ8TF44 421 aa12.44□□□□□ -0.42
TNFRSF4-202ENST00000453580 GPR82Q96P67 336 aa12.44□□□□□ -0.42
TNFRSF4-202ENST00000453580 HLA-DRB4P13762 266 aa12.43□□□□□ -0.42
TNFRSF4-202ENST00000453580 GALR1P47211 349 aa12.43□□□□□ -0.42
TNFRSF4-202ENST00000453580 NANOS2P60321 138 aaKnown RBP12.43□□□□□ -0.42
TNFRSF4-202ENST00000453580 AKR1C1Q04828 323 aa12.43□□□□□ -0.42
TNFRSF4-202ENST00000453580 LGALS9CQ6DKI2 356 aa12.43□□□□□ -0.42
TNFRSF4-202ENST00000453580 Q8NAQ8 132 aa12.43□□□□□ -0.42
TNFRSF4-202ENST00000453580 CLUHP3Q96NS8 147 aa12.43□□□□□ -0.42
TNFRSF4-202ENST00000453580 MAGT1Q9H0U3 335 aa12.43□□□□□ -0.42
TNFRSF4-202ENST00000453580 RNF24Q9Y225 148 aa12.43□□□□□ -0.42
TNFRSF4-202ENST00000453580 HLA-DRB4X5D2U9 266 aa12.43□□□□□ -0.42
TNFRSF4-202ENST00000453580 STARD9Q9P2P6 4700 aa12.43□□□□□ -0.42
TNFRSF4-202ENST00000453580 H3BMM0 161 aa12.42□□□□□ -0.42
TNFRSF4-202ENST00000453580 ISLRO14498 428 aa12.42□□□□□ -0.42
TNFRSF4-202ENST00000453580 GIG44P09565 113 aaPredicted RBP12.42□□□□□ -0.42
TNFRSF4-202ENST00000453580 OR4E1P0C645 316 aa12.42□□□□□ -0.42
TNFRSF4-202ENST00000453580 ID3Q02535 119 aa12.42□□□□□ -0.42
TNFRSF4-202ENST00000453580 OR2F1Q13607 317 aa12.42□□□□□ -0.42
TNFRSF4-202ENST00000453580 C4orf46Q504U0 113 aa12.42□□□□□ -0.42
TNFRSF4-202ENST00000453580 FOXI2Q6ZQN5 318 aa12.42□□□□□ -0.42
TNFRSF4-202ENST00000453580 OR4D5Q8NGN0 318 aa12.42□□□□□ -0.42
TNFRSF4-202ENST00000453580 IGHV4-28A0A0C4DH34 117 aa12.41□□□□□ -0.42
TNFRSF4-202ENST00000453580 C4BPBP20851 252 aa12.41□□□□□ -0.42
TNFRSF4-202ENST00000453580 BAK1Q16611 211 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms