RNA–Protein interactions for RNA: ENST00000453441.1

COL28A1-205, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 2

Gene COL28A1, Length 700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-205ENST00000453441 TMEM144Q7Z5S9 345 aa6.64□□□□□ -1.35
COL28A1-205ENST00000453441 THAP8Q8NA92 274 aa6.64□□□□□ -1.35
COL28A1-205ENST00000453441 THAP6Q8TBB0 222 aa6.64□□□□□ -1.35
COL28A1-205ENST00000453441 NPIPB3Q92617 1050 aa6.64□□□□□ -1.35
COL28A1-205ENST00000453441 TRGV9Q99603 122 aa6.64□□□□□ -1.35
COL28A1-205ENST00000453441 CHRDL1Q9BU40 450 aa6.64□□□□□ -1.35
COL28A1-205ENST00000453441 NBEAL1Q6ZS30 2694 aa6.64□□□□□ -1.35
COL28A1-205ENST00000453441 NOTCH1P46531 2555 aa6.63□□□□□ -1.35
COL28A1-205ENST00000453441 A0A1W2PS18 150 aa6.63□□□□□ -1.35
COL28A1-205ENST00000453441 C2orf70A6NJV1 201 aa6.63□□□□□ -1.35
COL28A1-205ENST00000453441 ZFP92A6NM28 416 aa6.63□□□□□ -1.35
COL28A1-205ENST00000453441 SAP30O75446 220 aa6.63□□□□□ -1.35
COL28A1-205ENST00000453441 TOMM40O96008 361 aa6.63□□□□□ -1.35
COL28A1-205ENST00000453441 IGKV1-17P01599 117 aa6.63□□□□□ -1.35
COL28A1-205ENST00000453441 IGHV3-48P01763 117 aa6.63□□□□□ -1.35
COL28A1-205ENST00000453441 CSN3P07498 182 aa6.63□□□□□ -1.35
COL28A1-205ENST00000453441 C8orf88P0DMB2 117 aa6.63□□□□□ -1.35
COL28A1-205ENST00000453441 LYL1P12980 280 aa6.63□□□□□ -1.35
COL28A1-205ENST00000453441 CXCL3P19876 107 aa6.63□□□□□ -1.35
COL28A1-205ENST00000453441 SELENOTP62341 195 aa6.63□□□□□ -1.35
COL28A1-205ENST00000453441 SLC38A11Q08AI6 406 aa6.63□□□□□ -1.35
COL28A1-205ENST00000453441 EGFEM1PQ0D2K5 195 aa6.63□□□□□ -1.35
COL28A1-205ENST00000453441 RAB31Q13636 194 aa6.63□□□□□ -1.35
COL28A1-205ENST00000453441 LRRC37A5PQ49AS3 106 aa6.63□□□□□ -1.35
COL28A1-205ENST00000453441 OR8G2PQ6IF36 304 aa6.63□□□□□ -1.35
COL28A1-205ENST00000453441 C11orf87Q6NUJ2 197 aa6.63□□□□□ -1.35
COL28A1-205ENST00000453441 ACOT7LQ6ZUV0 252 aa6.63□□□□□ -1.35
COL28A1-205ENST00000453441 S100A7AQ86SG5 101 aa6.63□□□□□ -1.35
COL28A1-205ENST00000453441 TMEM252Q8N6L7 170 aa6.63□□□□□ -1.35
COL28A1-205ENST00000453441 OR11H7Q8NGC8 314 aa6.63□□□□□ -1.35
COL28A1-205ENST00000453441 DYNLRB2Q8TF09 96 aa6.63□□□□□ -1.35
COL28A1-205ENST00000453441 NARS2Q96I59 477 aaKnown RBP6.63□□□□□ -1.35
COL28A1-205ENST00000453441 TMEM231Q9H6L2 316 aa6.63□□□□□ -1.35
COL28A1-205ENST00000453441 NPVFQ9HCQ7 196 aa6.63□□□□□ -1.35
COL28A1-205ENST00000453441 MRPL36Q9P0J6 103 aaKnown RBP6.63□□□□□ -1.35
COL28A1-205ENST00000453441 SORL1Q92673 2214 aa6.62□□□□□ -1.35
COL28A1-205ENST00000453441 TRAV14DV4A0A0A6YYC5 116 aa6.62□□□□□ -1.35
COL28A1-205ENST00000453441 TRAV25A0A0B4J276 109 aa6.62□□□□□ -1.35
COL28A1-205ENST00000453441 TMEM213A2RRL7 107 aa6.62□□□□□ -1.35
COL28A1-205ENST00000453441 FAM24AA6NFZ4 105 aa6.62□□□□□ -1.35
COL28A1-205ENST00000453441 MPDU1O75352 247 aa6.62□□□□□ -1.35
COL28A1-205ENST00000453441 YIF1AO95070 293 aa6.62□□□□□ -1.35
COL28A1-205ENST00000453441 IGLV1-51P01701 117 aa6.62□□□□□ -1.35
COL28A1-205ENST00000453441 RD3LP0DJH9 198 aa6.62□□□□□ -1.35
COL28A1-205ENST00000453441 FOLR2P14207 255 aa6.62□□□□□ -1.35
COL28A1-205ENST00000453441 CBLN1P23435 193 aa6.62□□□□□ -1.35
COL28A1-205ENST00000453441 TIGITQ495A1 244 aa6.62□□□□□ -1.35
COL28A1-205ENST00000453441 LCN12Q6JVE5 192 aa6.62□□□□□ -1.35
COL28A1-205ENST00000453441 TEPPQ6URK8 271 aa6.62□□□□□ -1.35
COL28A1-205ENST00000453441 TOMM20LQ6UXN7 152 aa6.62□□□□□ -1.35
COL28A1-205ENST00000453441 IL34Q6ZMJ4 242 aa6.62□□□□□ -1.35
COL28A1-205ENST00000453441 LILRB2Q8N423 598 aa6.62□□□□□ -1.35
COL28A1-205ENST00000453441 OR51G1Q8NGK1 321 aa6.62□□□□□ -1.35
COL28A1-205ENST00000453441 METTL26Q96S19 204 aa6.62□□□□□ -1.35
COL28A1-205ENST00000453441 C20orf24Q9BUV8 137 aa6.62□□□□□ -1.35
COL28A1-205ENST00000453441 TMEM147Q9BVK8 224 aa6.62□□□□□ -1.35
COL28A1-205ENST00000453441 ZC4H2Q9NQZ6 224 aa6.62□□□□□ -1.35
COL28A1-205ENST00000453441 UQCC1Q9NVA1 299 aa6.62□□□□□ -1.35
COL28A1-205ENST00000453441 SLC45A2Q9UMX9 530 aa6.62□□□□□ -1.35
COL28A1-205ENST00000453441 RNF24Q9Y225 148 aa6.62□□□□□ -1.35
COL28A1-205ENST00000453441 PUS1Q9Y606 427 aaKnown RBP eCLIP6.62□□□□□ -1.35
COL28A1-205ENST00000453441 IGSF23A1L1A6 192 aa6.61□□□□□ -1.35
COL28A1-205ENST00000453441 SMCO3A2RU48 225 aa6.61□□□□□ -1.35
COL28A1-205ENST00000453441 H0YIZ8 118 aa6.61□□□□□ -1.35
COL28A1-205ENST00000453441 DFFBO76075 338 aa6.61□□□□□ -1.35
COL28A1-205ENST00000453441 CST7O76096 145 aa6.61□□□□□ -1.35
COL28A1-205ENST00000453441 NPPCP23582 126 aa6.61□□□□□ -1.35
COL28A1-205ENST00000453441 EWSR1Q01844 656 aaKnown RBP eCLIP6.61□□□□□ -1.35
COL28A1-205ENST00000453441 VWC2Q2TAL6 325 aa6.61□□□□□ -1.35
COL28A1-205ENST00000453441 BEAN1Q3B7T3 259 aa6.61□□□□□ -1.35
COL28A1-205ENST00000453441 PXDC1Q5TGL8 231 aa6.61□□□□□ -1.35
COL28A1-205ENST00000453441 LAMTOR1Q6IAA8 161 aa6.61□□□□□ -1.35
COL28A1-205ENST00000453441 UNQ9165/PRO28630Q6UXU0 137 aa6.61□□□□□ -1.35
COL28A1-205ENST00000453441 Q6ZNX1 250 aa6.61□□□□□ -1.35
COL28A1-205ENST00000453441 ZNF546Q86UE3 836 aa6.61□□□□□ -1.35
COL28A1-205ENST00000453441 BPIFCQ8NFQ6 507 aa6.61□□□□□ -1.35
COL28A1-205ENST00000453441 GRAMD2BQ96HH9 432 aa6.61□□□□□ -1.35
COL28A1-205ENST00000453441 RNF126Q9BV68 326 aa6.61□□□□□ -1.35
COL28A1-205ENST00000453441 KCNIP2Q9NS61 270 aa6.61□□□□□ -1.35
COL28A1-205ENST00000453441 OR5AC2Q9NZP5 309 aa6.61□□□□□ -1.35
COL28A1-205ENST00000453441 MBD2Q9UBB5 411 aa6.61□□□□□ -1.35
COL28A1-205ENST00000453441 IGKV1D-37A0A075B6S9 117 aa6.6□□□□□ -1.35
COL28A1-205ENST00000453441 IGHV3-35A0A0C4DH35 117 aa6.6□□□□□ -1.35
COL28A1-205ENST00000453441 IGHV7-4-1A0A0J9YVY3 117 aa6.6□□□□□ -1.35
COL28A1-205ENST00000453441 G3V4G9 280 aa6.6□□□□□ -1.35
COL28A1-205ENST00000453441 PSG1P11464 419 aa6.6□□□□□ -1.35
COL28A1-205ENST00000453441 CRYBB3P26998 211 aa6.6□□□□□ -1.35
COL28A1-205ENST00000453441 RPL12P30050 165 aaKnown RBP6.6□□□□□ -1.35
COL28A1-205ENST00000453441 EIF2B2P49770 351 aaKnown RBP6.6□□□□□ -1.35
COL28A1-205ENST00000453441 DEFB114Q30KQ6 69 aa6.6□□□□□ -1.35
COL28A1-205ENST00000453441 TM4SF20Q53R12 229 aa6.6□□□□□ -1.35
COL28A1-205ENST00000453441 HAPLN4Q86UW8 402 aa6.6□□□□□ -1.35
COL28A1-205ENST00000453441 TMEM217Q8N7C4 229 aa6.6□□□□□ -1.35
COL28A1-205ENST00000453441 OR2T35Q8NGX2 323 aa6.6□□□□□ -1.35
COL28A1-205ENST00000453441 CHAC2Q8WUX2 184 aa6.6□□□□□ -1.35
COL28A1-205ENST00000453441 RNF125Q96EQ8 232 aa6.6□□□□□ -1.35
COL28A1-205ENST00000453441 SMPXQ9UHP9 88 aa6.6□□□□□ -1.35
COL28A1-205ENST00000453441 RABAC1Q9UI14 185 aa6.6□□□□□ -1.35
COL28A1-205ENST00000453441 WDR83OSQ9Y284 106 aa6.6□□□□□ -1.35
COL28A1-205ENST00000453441 ZNF256Q9Y2P7 627 aaPredicted RBP6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms