RNA–Protein interactions for RNA: ENST00000453337.1

HLA-DPA1-244, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS ALT2

Gene HLA-DPA1, Length 918 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-244ENST00000453337 FAM74A1Q5RGS3 127 aa9.7□□□□□ -0.86
HLA-DPA1-244ENST00000453337 S100A7AQ86SG5 101 aa9.7□□□□□ -0.86
HLA-DPA1-244ENST00000453337 OR51G1Q8NGK1 321 aa9.7□□□□□ -0.86
HLA-DPA1-244ENST00000453337 OR10G4Q8NGN3 311 aa9.7□□□□□ -0.86
HLA-DPA1-244ENST00000453337 OR10G9Q8NGN4 311 aa9.7□□□□□ -0.86
HLA-DPA1-244ENST00000453337 OR10G7Q8NGN6 311 aa9.7□□□□□ -0.86
HLA-DPA1-244ENST00000453337 OR1L4Q8NGR5 311 aa9.7□□□□□ -0.86
HLA-DPA1-244ENST00000453337 WIPF2Q8TF74 440 aaPredicted RBP9.7□□□□□ -0.86
HLA-DPA1-244ENST00000453337 GATAD1Q8WUU5 269 aa9.7□□□□□ -0.86
HLA-DPA1-244ENST00000453337 RNF2Q99496 336 aa9.7□□□□□ -0.86
HLA-DPA1-244ENST00000453337 RPRMQ9NS64 109 aa9.7□□□□□ -0.86
HLA-DPA1-244ENST00000453337 PLA2G2EQ9NZK7 142 aa9.7□□□□□ -0.86
HLA-DPA1-244ENST00000453337 NIPBLQ6KC79 2804 aaeCLIP9.69□□□□□ -0.86
HLA-DPA1-244ENST00000453337 A0A1W2PPV4 95 aa9.69□□□□□ -0.86
HLA-DPA1-244ENST00000453337 ANKRD34BA5PLL1 514 aa9.69□□□□□ -0.86
HLA-DPA1-244ENST00000453337 ZNF705EA8MWA4 302 aaPredicted RBP9.69□□□□□ -0.86
HLA-DPA1-244ENST00000453337 GGCTO75223 188 aaKnown RBP9.69□□□□□ -0.86
HLA-DPA1-244ENST00000453337 HYPMO75409 117 aa9.69□□□□□ -0.86
HLA-DPA1-244ENST00000453337 YIF1AO95070 293 aa9.69□□□□□ -0.86
HLA-DPA1-244ENST00000453337 S100A7P31151 101 aa9.69□□□□□ -0.86
HLA-DPA1-244ENST00000453337 ADMP35318 185 aa9.69□□□□□ -0.86
HLA-DPA1-244ENST00000453337 PROK1P58294 105 aa9.69□□□□□ -0.86
HLA-DPA1-244ENST00000453337 PFDN5Q99471 154 aa9.69□□□□□ -0.86
HLA-DPA1-244ENST00000453337 CHRDL1Q9BU40 450 aa9.69□□□□□ -0.86
HLA-DPA1-244ENST00000453337 ACTR3CQ9C0K3 210 aaPredicted RBP9.69□□□□□ -0.86
HLA-DPA1-244ENST00000453337 GNB4Q9HAV0 340 aa9.69□□□□□ -0.86
HLA-DPA1-244ENST00000453337 TEP1Q99973 2627 aaKnown RBP9.68□□□□□ -0.86
HLA-DPA1-244ENST00000453337 WI2-2373I1.2A0A1W2PRP0 233 aa9.68□□□□□ -0.86
HLA-DPA1-244ENST00000453337 TEX46H3BTG2 121 aa9.68□□□□□ -0.86
HLA-DPA1-244ENST00000453337 OR2C1O95371 312 aa9.68□□□□□ -0.86
HLA-DPA1-244ENST00000453337 LGALS1P09382 135 aaKnown RBP9.68□□□□□ -0.86
HLA-DPA1-244ENST00000453337 RHOBP62745 196 aa9.68□□□□□ -0.86
HLA-DPA1-244ENST00000453337 SRSF2Q01130 221 aaKnown RBP9.68□□□□□ -0.86
HLA-DPA1-244ENST00000453337 FAM213BQ8TBF2 198 aa9.68□□□□□ -0.86
HLA-DPA1-244ENST00000453337 VSIRQ9H7M9 311 aa9.68□□□□□ -0.86
HLA-DPA1-244ENST00000453337 C2CD3Q4AC94 2353 aa9.68□□□□□ -0.86
HLA-DPA1-244ENST00000453337 PPP5D1E7EU14 171 aa9.67□□□□□ -0.86
HLA-DPA1-244ENST00000453337 COX7A2P2O60397 106 aa9.67□□□□□ -0.86
HLA-DPA1-244ENST00000453337 HSPB1P04792 205 aaKnown RBP9.67□□□□□ -0.86
HLA-DPA1-244ENST00000453337 H2AFB1P0C5Y9 115 aa9.67□□□□□ -0.86
HLA-DPA1-244ENST00000453337 OR5G3P0C626 314 aa9.67□□□□□ -0.86
HLA-DPA1-244ENST00000453337 ORM2P19652 201 aa9.67□□□□□ -0.86
HLA-DPA1-244ENST00000453337 RAB2AP61019 212 aa9.67□□□□□ -0.86
HLA-DPA1-244ENST00000453337 LYZP61626 148 aa9.67□□□□□ -0.86
HLA-DPA1-244ENST00000453337 FAM106AQ4KMX7 169 aa9.67□□□□□ -0.86
HLA-DPA1-244ENST00000453337 TCTEX1D4Q5JR98 221 aa9.67□□□□□ -0.86
HLA-DPA1-244ENST00000453337 CLLU1Q5K131 121 aa9.67□□□□□ -0.86
HLA-DPA1-244ENST00000453337 C10orf113Q5VZT2 155 aa9.67□□□□□ -0.86
HLA-DPA1-244ENST00000453337 RPP25LQ8N5L8 163 aaKnown RBP9.67□□□□□ -0.86
HLA-DPA1-244ENST00000453337 OR1B1Q8NGR6 318 aa9.67□□□□□ -0.86
HLA-DPA1-244ENST00000453337 OR5B12Q96R08 314 aa9.67□□□□□ -0.86
HLA-DPA1-244ENST00000453337 PFDN2Q9UHV9 154 aa9.67□□□□□ -0.86
HLA-DPA1-244ENST00000453337 RNF24Q9Y225 148 aa9.67□□□□□ -0.86
HLA-DPA1-244ENST00000453337 TSSC4Q9Y5U2 329 aaPredicted RBP9.67□□□□□ -0.86
HLA-DPA1-244ENST00000453337 PUS1Q9Y606 427 aaKnown RBP eCLIP9.67□□□□□ -0.86
HLA-DPA1-244ENST00000453337 CTXND1A0A1B0GTU2 59 aa9.66□□□□□ -0.86
HLA-DPA1-244ENST00000453337 SEC14L6B5MCN3 397 aa9.66□□□□□ -0.86
HLA-DPA1-244ENST00000453337 BMPR1BO00238 502 aa9.66□□□□□ -0.86
HLA-DPA1-244ENST00000453337 NDUFA4O00483 81 aa9.66□□□□□ -0.86
HLA-DPA1-244ENST00000453337 HBE1P02100 147 aa9.66□□□□□ -0.86
HLA-DPA1-244ENST00000453337 IL4P05112 153 aa9.66□□□□□ -0.86
HLA-DPA1-244ENST00000453337 CD28P10747 220 aa9.66□□□□□ -0.86
HLA-DPA1-244ENST00000453337 CDC34P49427 236 aaPredicted RBP9.66□□□□□ -0.86
HLA-DPA1-244ENST00000453337 KHDC1LQ5JSQ8 128 aa9.66□□□□□ -0.86
HLA-DPA1-244ENST00000453337 FAM78BQ5VT40 261 aa9.66□□□□□ -0.86
HLA-DPA1-244ENST00000453337 FAM122CQ6P4D5 195 aa9.66□□□□□ -0.86
HLA-DPA1-244ENST00000453337 TOMM20LQ6UXN7 152 aa9.66□□□□□ -0.86
HLA-DPA1-244ENST00000453337 GPHB5Q86YW7 130 aa9.66□□□□□ -0.86
HLA-DPA1-244ENST00000453337 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.66□□□□□ -0.86
HLA-DPA1-244ENST00000453337 C4orf3Q8WVX3 66 aa9.66□□□□□ -0.86
HLA-DPA1-244ENST00000453337 MBD3L1Q8WWY6 194 aa9.66□□□□□ -0.86
HLA-DPA1-244ENST00000453337 TMEM37Q8WXS4 190 aa9.66□□□□□ -0.86
HLA-DPA1-244ENST00000453337 DPF1Q92782 380 aa9.66□□□□□ -0.86
HLA-DPA1-244ENST00000453337 RNF125Q96EQ8 232 aa9.66□□□□□ -0.86
HLA-DPA1-244ENST00000453337 MRPL32Q9BYC8 188 aaKnown RBP9.66□□□□□ -0.86
HLA-DPA1-244ENST00000453337 MRPL27Q9P0M9 148 aaKnown RBP9.66□□□□□ -0.86
HLA-DPA1-244ENST00000453337 HIGD1AQ9Y241 93 aa9.66□□□□□ -0.86
HLA-DPA1-244ENST00000453337 JMJD1CQ15652 2540 aa9.66□□□□□ -0.86
HLA-DPA1-244ENST00000453337 IGHV3-35A0A0C4DH35 117 aa9.65□□□□□ -0.86
HLA-DPA1-244ENST00000453337 NUDT19A8MXV4 375 aa9.65□□□□□ -0.86
HLA-DPA1-244ENST00000453337 I3L521 148 aa9.65□□□□□ -0.86
HLA-DPA1-244ENST00000453337 TRBV12-3P01733 135 aa9.65□□□□□ -0.86
HLA-DPA1-244ENST00000453337 NMBP08949 121 aa9.65□□□□□ -0.86
HLA-DPA1-244ENST00000453337 ZP3P21754 424 aa9.65□□□□□ -0.86
HLA-DPA1-244ENST00000453337 FHITP49789 147 aa9.65□□□□□ -0.86
HLA-DPA1-244ENST00000453337 TAS2R45P59539 299 aa9.65□□□□□ -0.86
HLA-DPA1-244ENST00000453337 RPEL1Q2QD12 228 aa9.65□□□□□ -0.86
HLA-DPA1-244ENST00000453337 GCSAMLQ5JQS6 135 aa9.65□□□□□ -0.86
HLA-DPA1-244ENST00000453337 PATE2Q6UY27 113 aa9.65□□□□□ -0.86
HLA-DPA1-244ENST00000453337 SFT2D1Q8WV19 159 aa9.65□□□□□ -0.86
HLA-DPA1-244ENST00000453337 RAB24Q969Q5 203 aa9.65□□□□□ -0.86
HLA-DPA1-244ENST00000453337 RCC1LQ96I51 464 aaKnown RBP9.65□□□□□ -0.86
HLA-DPA1-244ENST00000453337 PBDC1Q9BVG4 233 aa9.65□□□□□ -0.86
HLA-DPA1-244ENST00000453337 DOK5Q9P104 306 aa9.65□□□□□ -0.86
HLA-DPA1-244ENST00000453337 SETD2Q9BYW2 2564 aaPredicted RBP9.64□□□□□ -0.87
HLA-DPA1-244ENST00000453337 TRAV1-1A0A0B4J248 108 aa9.64□□□□□ -0.87
HLA-DPA1-244ENST00000453337 LINC00305Q7Z4B0 112 aa9.64□□□□□ -0.87
HLA-DPA1-244ENST00000453337 KLHL30-AS1Q8NEE0 82 aa9.64□□□□□ -0.87
HLA-DPA1-244ENST00000453337 CITED2Q99967 270 aaPredicted RBP9.64□□□□□ -0.87
HLA-DPA1-244ENST00000453337 SEPSECSQ9HD40 501 aaKnown RBP9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms