RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 TNFP01375 233 aa3.06□□□□□ -1.92
HMGB3P21-201ENST00000452483 C1QAP02745 245 aa3.06□□□□□ -1.92
HMGB3P21-201ENST00000452483 CD2P06729 351 aa3.06□□□□□ -1.92
HMGB3P21-201ENST00000452483 SPINK8P0C7L1 97 aa3.06□□□□□ -1.92
HMGB3P21-201ENST00000452483 CGB3P0DN86 165 aa3.06□□□□□ -1.92
HMGB3P21-201ENST00000452483 CGB7P0DN87 165 aa3.06□□□□□ -1.92
HMGB3P21-201ENST00000452483 SLC25A16P16260 332 aa3.06□□□□□ -1.92
HMGB3P21-201ENST00000452483 AQP4P55087 323 aa3.06□□□□□ -1.92
HMGB3P21-201ENST00000452483 FXYD7P58549 80 aa3.06□□□□□ -1.92
HMGB3P21-201ENST00000452483 ERICH3Q5RHP9 1530 aa3.06□□□□□ -1.92
HMGB3P21-201ENST00000452483 MRPL54Q6P161 138 aaKnown RBP3.06□□□□□ -1.92
HMGB3P21-201ENST00000452483 ZNF705AQ6ZN79 300 aaPredicted RBP3.06□□□□□ -1.92
HMGB3P21-201ENST00000452483 MIR17HGQ75NE6 70 aa3.06□□□□□ -1.92
HMGB3P21-201ENST00000452483 GTSCR1Q86UQ5 136 aa3.06□□□□□ -1.92
HMGB3P21-201ENST00000452483 LINC00311Q8N616 119 aa3.06□□□□□ -1.92
HMGB3P21-201ENST00000452483 ZFAND2AQ8N6M9 145 aa3.06□□□□□ -1.92
HMGB3P21-201ENST00000452483 Q8N976 141 aa3.06□□□□□ -1.92
HMGB3P21-201ENST00000452483 APCDD1LQ8NCL9 501 aa3.06□□□□□ -1.92
HMGB3P21-201ENST00000452483 OR4B1Q8NGF8 309 aa3.06□□□□□ -1.92
HMGB3P21-201ENST00000452483 COPS9Q8WXC6 57 aa3.06□□□□□ -1.92
HMGB3P21-201ENST00000452483 DPH3Q96FX2 82 aa3.06□□□□□ -1.92
HMGB3P21-201ENST00000452483 VGLL1Q99990 258 aa3.06□□□□□ -1.92
HMGB3P21-201ENST00000452483 NSD3Q9BZ95 1437 aa3.06□□□□□ -1.92
HMGB3P21-201ENST00000452483 TTTY13Q9BZ97 58 aa3.06□□□□□ -1.92
HMGB3P21-201ENST00000452483 PLA2G2FQ9BZM2 168 aa3.06□□□□□ -1.92
HMGB3P21-201ENST00000452483 RPRMQ9NS64 109 aa3.06□□□□□ -1.92
HMGB3P21-201ENST00000452483 MDFICQ9P1T7 246 aa3.06□□□□□ -1.92
HMGB3P21-201ENST00000452483 DSCAML1Q8TD84 2053 aa3.05□□□□□ -1.92
HMGB3P21-201ENST00000452483 ZNF638Q14966 1978 aaKnown RBP3.05□□□□□ -1.92
HMGB3P21-201ENST00000452483 DENND4CQ5VZ89 1909 aa3.05□□□□□ -1.92
HMGB3P21-201ENST00000452483 PLXNB3Q9ULL4 1909 aa3.05□□□□□ -1.92
HMGB3P21-201ENST00000452483 SBF1O95248 1867 aa3.05□□□□□ -1.92
HMGB3P21-201ENST00000452483 NLRC5Q86WI3 1866 aa3.05□□□□□ -1.92
HMGB3P21-201ENST00000452483 ANKRD31Q8N7Z5 1873 aa3.05□□□□□ -1.92
HMGB3P21-201ENST00000452483 KDM5CP41229 1560 aa3.05□□□□□ -1.92
HMGB3P21-201ENST00000452483 NCAPD3P42695 1498 aa3.05□□□□□ -1.92
HMGB3P21-201ENST00000452483 CEP164Q9UPV0 1460 aa3.05□□□□□ -1.92
HMGB3P21-201ENST00000452483 CEP162Q5TB80 1403 aa3.05□□□□□ -1.92
HMGB3P21-201ENST00000452483 A0A0J9YW62 118 aa3.05□□□□□ -1.92
HMGB3P21-201ENST00000452483 TMEM223A0PJW6 202 aa3.05□□□□□ -1.92
HMGB3P21-201ENST00000452483 A6NDX4 124 aa3.05□□□□□ -1.92
HMGB3P21-201ENST00000452483 C19orf84I3L1E1 186 aa3.05□□□□□ -1.92
HMGB3P21-201ENST00000452483 SLC25A20O43772 301 aa3.05□□□□□ -1.92
HMGB3P21-201ENST00000452483 SOD1P00441 154 aa3.05□□□□□ -1.92
HMGB3P21-201ENST00000452483 KRTAP5-9P26371 169 aa3.05□□□□□ -1.92
HMGB3P21-201ENST00000452483 RNASE4P34096 147 aaKnown RBP3.05□□□□□ -1.92
HMGB3P21-201ENST00000452483 TMEM91Q6ZNR0 172 aa3.05□□□□□ -1.92
HMGB3P21-201ENST00000452483 AAED1Q7RTV5 226 aa3.05□□□□□ -1.92
HMGB3P21-201ENST00000452483 ATOH7Q8N100 152 aa3.05□□□□□ -1.92
HMGB3P21-201ENST00000452483 SVBPQ8N300 66 aa3.05□□□□□ -1.92
HMGB3P21-201ENST00000452483 TTC9CQ8N5M4 171 aa3.05□□□□□ -1.92
HMGB3P21-201ENST00000452483 Q8N9W7 124 aa3.05□□□□□ -1.92
HMGB3P21-201ENST00000452483 MORN4Q8NDC4 146 aa3.05□□□□□ -1.92
HMGB3P21-201ENST00000452483 CIRBP-AS1Q8TBR5 109 aa3.05□□□□□ -1.92
HMGB3P21-201ENST00000452483 ELSPBP1Q96BH3 223 aa3.05□□□□□ -1.92
HMGB3P21-201ENST00000452483 SCGB3A1Q96QR1 104 aa3.05□□□□□ -1.92
HMGB3P21-201ENST00000452483 NAA60Q9H7X0 242 aa3.05□□□□□ -1.92
HMGB3P21-201ENST00000452483 A2ML1A8K2U0 1454 aa3.04□□□□□ -1.92
HMGB3P21-201ENST00000452483 MED14O60244 1454 aa3.04□□□□□ -1.92
HMGB3P21-201ENST00000452483 MAGI1Q96QZ7 1491 aaPredicted RBP3.04□□□□□ -1.92
HMGB3P21-201ENST00000452483 KIAA1107Q9UPP5 1409 aa3.04□□□□□ -1.92
HMGB3P21-201ENST00000452483 IGLV3-10A0A075B6K4 115 aa3.04□□□□□ -1.92
HMGB3P21-201ENST00000452483 H3BQF6 201 aa3.04□□□□□ -1.92
HMGB3P21-201ENST00000452483 RER1O15258 196 aa3.04□□□□□ -1.92
HMGB3P21-201ENST00000452483 IGHV1-46P01743 117 aa3.04□□□□□ -1.92
HMGB3P21-201ENST00000452483 IGHV3-7P01780 117 aa3.04□□□□□ -1.92
HMGB3P21-201ENST00000452483 TRGV3P03979 118 aa3.04□□□□□ -1.92
HMGB3P21-201ENST00000452483 IGKV1-16P04430 117 aa3.04□□□□□ -1.92
HMGB3P21-201ENST00000452483 ZNF286BP0CG31 522 aa3.04□□□□□ -1.92
HMGB3P21-201ENST00000452483 IGHV3-30-3P0DP02 117 aa3.04□□□□□ -1.92
HMGB3P21-201ENST00000452483 IFITM1P13164 125 aa3.04□□□□□ -1.92
HMGB3P21-201ENST00000452483 LSM3P62310 102 aaKnown RBP3.04□□□□□ -1.92
HMGB3P21-201ENST00000452483 SNRPD3P62318 126 aaKnown RBP3.04□□□□□ -1.92
HMGB3P21-201ENST00000452483 RPL36AP83881 106 aaKnown RBP3.04□□□□□ -1.92
HMGB3P21-201ENST00000452483 SYCNQ0VAF6 134 aa3.04□□□□□ -1.92
HMGB3P21-201ENST00000452483 TMEM155Q4W5P6 130 aa3.04□□□□□ -1.92
HMGB3P21-201ENST00000452483 NTM-AS1Q6ZSK4 140 aa3.04□□□□□ -1.92
HMGB3P21-201ENST00000452483 C7orf65Q6ZTY9 151 aa3.04□□□□□ -1.92
HMGB3P21-201ENST00000452483 TEN1Q86WV5 123 aa3.04□□□□□ -1.92
HMGB3P21-201ENST00000452483 C15orf56Q8N910 161 aa3.04□□□□□ -1.92
HMGB3P21-201ENST00000452483 PLPP5Q8NEB5 264 aa3.04□□□□□ -1.92
HMGB3P21-201ENST00000452483 RBMXL1Q96E39 390 aaKnown RBP3.04□□□□□ -1.92
HMGB3P21-201ENST00000452483 LINC00479Q96M42 142 aa3.04□□□□□ -1.92
HMGB3P21-201ENST00000452483 C11orf1Q9H5F2 150 aa3.04□□□□□ -1.92
HMGB3P21-201ENST00000452483 ZNRD1Q9P1U0 126 aa3.04□□□□□ -1.92
HMGB3P21-201ENST00000452483 ZNF222Q9UK12 451 aa3.04□□□□□ -1.92
HMGB3P21-201ENST00000452483 LINC00588Q9Y4M8 146 aa3.04□□□□□ -1.92
HMGB3P21-201ENST00000452483 ECM29Q5VYK3 1845 aa3.04□□□□□ -1.92
HMGB3P21-201ENST00000452483 ARHGAP35Q9NRY4 1499 aa3.03□□□□□ -1.92
HMGB3P21-201ENST00000452483 CRB1P82279 1406 aa3.03□□□□□ -1.92
HMGB3P21-201ENST00000452483 YEATS2Q9ULM3 1422 aa3.03□□□□□ -1.92
HMGB3P21-201ENST00000452483 KTN1Q86UP2 1357 aaKnown RBP3.03□□□□□ -1.92
HMGB3P21-201ENST00000452483 ATAD5Q96QE3 1844 aa3.03□□□□□ -1.92
HMGB3P21-201ENST00000452483 TRAV12-2A0A075B6T6 113 aa3.03□□□□□ -1.92
HMGB3P21-201ENST00000452483 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.03□□□□□ -1.92
HMGB3P21-201ENST00000452483 KLF18A0A0U1RQI7 1052 aa3.03□□□□□ -1.92
HMGB3P21-201ENST00000452483 A0A1W2PPR1 153 aa3.03□□□□□ -1.92
HMGB3P21-201ENST00000452483 A8MWP4 228 aa3.03□□□□□ -1.92
HMGB3P21-201ENST00000452483 C11orf94C9JXX5 98 aa3.03□□□□□ -1.92
HMGB3P21-201ENST00000452483 H7C423 109 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms