RNA–Protein interactions for RNA: ENST00000452111.5

CTNS-204, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3

Gene CTNS, Length 617 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-204ENST00000452111 WRBO00258 174 aa13.2□□□□□ -0.3
CTNS-204ENST00000452111 SYNGR2O43760 224 aa13.2□□□□□ -0.3
CTNS-204ENST00000452111 OR4E1P0C645 316 aa13.2□□□□□ -0.3
CTNS-204ENST00000452111 ANXA7P20073 488 aaKnown RBP13.2□□□□□ -0.3
CTNS-204ENST00000452111 EIF2B2P49770 351 aaKnown RBP13.2□□□□□ -0.3
CTNS-204ENST00000452111 DHRS2Q13268 280 aa13.2□□□□□ -0.3
CTNS-204ENST00000452111 C16orf54Q6UWD8 224 aa13.2□□□□□ -0.3
CTNS-204ENST00000452111 LYG2Q86SG7 212 aa13.2□□□□□ -0.3
CTNS-204ENST00000452111 GLMPQ8WWB7 406 aa13.2□□□□□ -0.3
CTNS-204ENST00000452111 CIB3Q96Q77 187 aaPredicted RBP13.2□□□□□ -0.3
CTNS-204ENST00000452111 PBDC1Q9BVG4 233 aa13.2□□□□□ -0.3
CTNS-204ENST00000452111 DNAH1Q9P2D7 4330 aa13.2□□□□□ -0.3
CTNS-204ENST00000452111 IGKV1D-37A0A075B6S9 117 aa13.19□□□□□ -0.3
CTNS-204ENST00000452111 LCE6AA0A183 80 aa13.19□□□□□ -0.3
CTNS-204ENST00000452111 HELTA6NFD8 242 aa13.19□□□□□ -0.3
CTNS-204ENST00000452111 ZNF688P0C7X2 276 aa13.19□□□□□ -0.3
CTNS-204ENST00000452111 ZNF90Q03938 601 aa13.19□□□□□ -0.3
CTNS-204ENST00000452111 C4orf46Q504U0 113 aa13.19□□□□□ -0.3
CTNS-204ENST00000452111 COQ8AQ8NI60 647 aa13.19□□□□□ -0.3
CTNS-204ENST00000452111 DCANP1Q8TF63 244 aa13.19□□□□□ -0.3
CTNS-204ENST00000452111 RNF125Q96EQ8 232 aa13.19□□□□□ -0.3
CTNS-204ENST00000452111 C7orf50Q9BRJ6 194 aaKnown RBP13.19□□□□□ -0.3
CTNS-204ENST00000452111 PLECQ15149 4684 aaKnown RBP13.19□□□□□ -0.3
CTNS-204ENST00000452111 H3BP45 60 aa13.18□□□□□ -0.3
CTNS-204ENST00000452111 CA1P00915 261 aaPredicted RBP13.18□□□□□ -0.3
CTNS-204ENST00000452111 RPP30P78346 268 aaKnown RBP13.18□□□□□ -0.3
CTNS-204ENST00000452111 STHQ8IWL8 128 aa13.18□□□□□ -0.3
CTNS-204ENST00000452111 BUB3O43684 328 aa13.17□□□□□ -0.3
CTNS-204ENST00000452111 LYZP61626 148 aa13.17□□□□□ -0.3
CTNS-204ENST00000452111 EWSR1Q01844 656 aaKnown RBP eCLIP13.17□□□□□ -0.3
CTNS-204ENST00000452111 PMS2P11Q13670 270 aa13.17□□□□□ -0.3
CTNS-204ENST00000452111 SPANXN5Q5MJ07 72 aa13.17□□□□□ -0.3
CTNS-204ENST00000452111 KNCNA6PVL3 124 aa13.16□□□□□ -0.3
CTNS-204ENST00000452111 IFNA21P01568 189 aa13.16□□□□□ -0.3
CTNS-204ENST00000452111 AP2S1P53680 142 aaPredicted RBP13.16□□□□□ -0.3
CTNS-204ENST00000452111 POLR2GP62487 172 aaKnown RBP eCLIP13.16□□□□□ -0.3
CTNS-204ENST00000452111 OR2F1Q13607 317 aa13.16□□□□□ -0.3
CTNS-204ENST00000452111 SIGLEC15Q6ZMC9 328 aa13.16□□□□□ -0.3
CTNS-204ENST00000452111 CXorf65A6NEN9 183 aa13.15□□□□□ -0.3
CTNS-204ENST00000452111 PLA2G10O15496 165 aa13.15□□□□□ -0.3
CTNS-204ENST00000452111 FABP1P07148 127 aa13.15□□□□□ -0.3
CTNS-204ENST00000452111 PSMG4Q5JS54 123 aa13.15□□□□□ -0.3
CTNS-204ENST00000452111 TRGV9Q99603 122 aa13.15□□□□□ -0.3
CTNS-204ENST00000452111 C20orf85Q9H1P6 137 aa13.15□□□□□ -0.3
CTNS-204ENST00000452111 STRAPQ9Y3F4 350 aaKnown RBP13.15□□□□□ -0.3
CTNS-204ENST00000452111 ALMS1Q8TCU4 4167 aa13.14□□□□□ -0.31
CTNS-204ENST00000452111 IGKV1OR2-108A0A075B7D4 117 aa13.14□□□□□ -0.31
CTNS-204ENST00000452111 SNRPGP15A8MWD9 76 aa13.14□□□□□ -0.31
CTNS-204ENST00000452111 PRSS46E5RG02 174 aa13.14□□□□□ -0.31
CTNS-204ENST00000452111 LYRM1O43325 122 aa13.14□□□□□ -0.31
CTNS-204ENST00000452111 NKX2-1P43699 371 aaPredicted RBP13.14□□□□□ -0.31
CTNS-204ENST00000452111 ID3Q02535 119 aa13.14□□□□□ -0.31
CTNS-204ENST00000452111 ACTL10Q5JWF8 245 aa13.14□□□□□ -0.31
CTNS-204ENST00000452111 OR8G2PQ6IF36 304 aa13.14□□□□□ -0.31
CTNS-204ENST00000452111 TRPT1Q86TN4 253 aaKnown RBP13.14□□□□□ -0.31
CTNS-204ENST00000452111 THAP8Q8NA92 274 aa13.14□□□□□ -0.31
CTNS-204ENST00000452111 OR4D5Q8NGN0 318 aa13.14□□□□□ -0.31
CTNS-204ENST00000452111 GATAD1Q8WUU5 269 aa13.14□□□□□ -0.31
CTNS-204ENST00000452111 RARRES2Q99969 163 aa13.14□□□□□ -0.31
CTNS-204ENST00000452111 NRN1Q9NPD7 142 aa13.14□□□□□ -0.31
CTNS-204ENST00000452111 SSSCA1O60232 199 aa13.13□□□□□ -0.31
CTNS-204ENST00000452111 SCGB1D2O95969 90 aa13.13□□□□□ -0.31
CTNS-204ENST00000452111 NUP62P37198 522 aaPredicted RBP13.13□□□□□ -0.31
CTNS-204ENST00000452111 ACOT7LQ6ZUV0 252 aa13.13□□□□□ -0.31
CTNS-204ENST00000452111 OR11H2Q8NH07 326 aa13.13□□□□□ -0.31
CTNS-204ENST00000452111 PPP1R14BQ96C90 147 aa13.13□□□□□ -0.31
CTNS-204ENST00000452111 PSENENQ9NZ42 101 aa13.13□□□□□ -0.31
CTNS-204ENST00000452111 PFDN2Q9UHV9 154 aa13.13□□□□□ -0.31
CTNS-204ENST00000452111 SNRPD3P62318 126 aaKnown RBP13.12□□□□□ -0.31
CTNS-204ENST00000452111 AKR1C1Q04828 323 aa13.12□□□□□ -0.31
CTNS-204ENST00000452111 IAH1Q2TAA2 248 aaPredicted RBP13.12□□□□□ -0.31
CTNS-204ENST00000452111 CNPY1Q3B7I2 92 aa13.12□□□□□ -0.31
CTNS-204ENST00000452111 TMEM217Q8N7C4 229 aa13.12□□□□□ -0.31
CTNS-204ENST00000452111 TRAV6A0A075B6T7 132 aa13.11□□□□□ -0.31
CTNS-204ENST00000452111 SMCO3A2RU48 225 aa13.11□□□□□ -0.31
CTNS-204ENST00000452111 JTBO76095 146 aa13.11□□□□□ -0.31
CTNS-204ENST00000452111 MITD1Q8WV92 249 aa13.11□□□□□ -0.31
CTNS-204ENST00000452111 RAB40CQ96S21 281 aa13.11□□□□□ -0.31
CTNS-204ENST00000452111 TCRBP04435 133 aa13.1□□□□□ -0.31
CTNS-204ENST00000452111 GIG44P09565 113 aaPredicted RBP13.1□□□□□ -0.31
CTNS-204ENST00000452111 SPP1P10451 314 aa13.1□□□□□ -0.31
CTNS-204ENST00000452111 C4BPBP20851 252 aa13.1□□□□□ -0.31
CTNS-204ENST00000452111 GATA2P23769 480 aaPredicted RBP13.1□□□□□ -0.31
CTNS-204ENST00000452111 CCDC32Q9BV29 185 aa13.1□□□□□ -0.31
CTNS-204ENST00000452111 GSKIPQ9P0R6 139 aa13.1□□□□□ -0.31
CTNS-204ENST00000452111 HYDINQ4G0P3 5121 aa13.09□□□□□ -0.31
CTNS-204ENST00000452111 CCSO14618 274 aa13.09□□□□□ -0.31
CTNS-204ENST00000452111 CCNKO75909 580 aa13.09□□□□□ -0.31
CTNS-204ENST00000452111 ATF4P18848 351 aaPredicted RBP13.09□□□□□ -0.31
CTNS-204ENST00000452111 MORN3Q6PF18 240 aaPredicted RBP13.09□□□□□ -0.31
CTNS-204ENST00000452111 GSG1LQ6UXU4 331 aa13.09□□□□□ -0.31
CTNS-204ENST00000452111 ZBTB8BQ8NAP8 495 aaPredicted RBP13.09□□□□□ -0.31
CTNS-204ENST00000452111 SMIM8Q96KF7 97 aa13.09□□□□□ -0.31
CTNS-204ENST00000452111 NUDT15Q9NV35 164 aa13.09□□□□□ -0.31
CTNS-204ENST00000452111 FBXL17Q9UF56 701 aa13.09□□□□□ -0.31
CTNS-204ENST00000452111 NUPR2A6NF83 97 aa13.08□□□□□ -0.32
CTNS-204ENST00000452111 DEFB4AO15263 64 aa13.08□□□□□ -0.32
CTNS-204ENST00000452111 CFDP00746 253 aaPredicted RBP13.08□□□□□ -0.32
CTNS-204ENST00000452111 METTL15P1P0C7V9 234 aa13.08□□□□□ -0.32
CTNS-204ENST00000452111 PAX9P55771 341 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms