RNA–Protein interactions for RNA: ENST00000450867.1

COL3A1-203, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL3A1, Length 268 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-203ENST00000450867 VAMP2P63027 116 aa10.75□□□□□ -0.69
COL3A1-203ENST00000450867 ZNF90Q03938 601 aa10.75□□□□□ -0.69
COL3A1-203ENST00000450867 USF2Q15853 346 aaPredicted RBP10.75□□□□□ -0.69
COL3A1-203ENST00000450867 GUCA2BQ16661 112 aa10.75□□□□□ -0.69
COL3A1-203ENST00000450867 OR8G2PQ6IF36 304 aa10.75□□□□□ -0.69
COL3A1-203ENST00000450867 NEURL2Q9BR09 285 aa10.75□□□□□ -0.69
COL3A1-203ENST00000450867 LYRM2Q9NU23 88 aaPredicted RBP10.75□□□□□ -0.69
COL3A1-203ENST00000450867 SSNA1O43805 119 aa10.74□□□□□ -0.69
COL3A1-203ENST00000450867 DEDDO75618 318 aa10.74□□□□□ -0.69
COL3A1-203ENST00000450867 SIX6O95475 246 aa10.74□□□□□ -0.69
COL3A1-203ENST00000450867 CFDP00746 253 aaPredicted RBP10.74□□□□□ -0.69
COL3A1-203ENST00000450867 HNRNPCP07910 306 aaKnown RBP eCLIP10.74□□□□□ -0.69
COL3A1-203ENST00000450867 CD7P09564 240 aa10.74□□□□□ -0.69
COL3A1-203ENST00000450867 IGHV4-30-4P0DP06 118 aa10.74□□□□□ -0.69
COL3A1-203ENST00000450867 CD81P60033 236 aa10.74□□□□□ -0.69
COL3A1-203ENST00000450867 ARL16Q0P5N6 197 aa10.74□□□□□ -0.69
COL3A1-203ENST00000450867 LILRB2Q8N423 598 aa10.74□□□□□ -0.69
COL3A1-203ENST00000450867 OR10P1Q8NGE3 313 aa10.74□□□□□ -0.69
COL3A1-203ENST00000450867 RNF125Q96EQ8 232 aa10.74□□□□□ -0.69
COL3A1-203ENST00000450867 ALG5Q9Y673 324 aa10.74□□□□□ -0.69
COL3A1-203ENST00000450867 SELENOKQ9Y6D0 94 aa10.74□□□□□ -0.69
COL3A1-203ENST00000450867 IGHV3OR16-13A0A075B7E8 117 aa10.73□□□□□ -0.69
COL3A1-203ENST00000450867 IGHV3-49A0A0A0MS15 119 aa10.73□□□□□ -0.69
COL3A1-203ENST00000450867 IGHV3-74A0A0B4J1X5 117 aa10.73□□□□□ -0.69
COL3A1-203ENST00000450867 TRAV2A0A0B4J234 112 aa10.73□□□□□ -0.69
COL3A1-203ENST00000450867 OR4C46A6NHA9 309 aa10.73□□□□□ -0.69
COL3A1-203ENST00000450867 FRMD6-AS1P0C7T7 363 aa10.73□□□□□ -0.69
COL3A1-203ENST00000450867 NUP62P37198 522 aaPredicted RBP10.73□□□□□ -0.69
COL3A1-203ENST00000450867 S100A10P60903 97 aa10.73□□□□□ -0.69
COL3A1-203ENST00000450867 AKR1C1Q04828 323 aa10.73□□□□□ -0.69
COL3A1-203ENST00000450867 NPVFQ9HCQ7 196 aa10.73□□□□□ -0.69
COL3A1-203ENST00000450867 SLC45A2Q9UMX9 530 aa10.73□□□□□ -0.69
COL3A1-203ENST00000450867 BUB3O43684 328 aa10.72□□□□□ -0.69
COL3A1-203ENST00000450867 P2RY1P47900 373 aa10.72□□□□□ -0.69
COL3A1-203ENST00000450867 EIF2B2P49770 351 aaKnown RBP10.72□□□□□ -0.69
COL3A1-203ENST00000450867 SULT1A1P50225 295 aa10.72□□□□□ -0.69
COL3A1-203ENST00000450867 OXA1LQ15070 435 aa10.72□□□□□ -0.69
COL3A1-203ENST00000450867 RGS21Q2M5E4 152 aa10.72□□□□□ -0.69
COL3A1-203ENST00000450867 C16orf54Q6UWD8 224 aa10.72□□□□□ -0.69
COL3A1-203ENST00000450867 LINC00322Q6ZN03 302 aaPredicted RBP10.72□□□□□ -0.69
COL3A1-203ENST00000450867 TCF24Q7RTU0 167 aa10.72□□□□□ -0.69
COL3A1-203ENST00000450867 GLMPQ8WWB7 406 aa10.72□□□□□ -0.69
COL3A1-203ENST00000450867 NARS2Q96I59 477 aaKnown RBP10.72□□□□□ -0.69
COL3A1-203ENST00000450867 MGAT4CQ9UBM8 478 aa10.72□□□□□ -0.69
COL3A1-203ENST00000450867 RABAC1Q9UI14 185 aa10.72□□□□□ -0.69
COL3A1-203ENST00000450867 NBEAL2Q6ZNJ1 2754 aa10.72□□□□□ -0.69
COL3A1-203ENST00000450867 IGSF23A1L1A6 192 aa10.71□□□□□ -0.69
COL3A1-203ENST00000450867 FAM24AA6NFZ4 105 aa10.71□□□□□ -0.69
COL3A1-203ENST00000450867 E5RGE8 158 aa10.71□□□□□ -0.69
COL3A1-203ENST00000450867 H0YIZ8 118 aa10.71□□□□□ -0.69
COL3A1-203ENST00000450867 DFFBO76075 338 aa10.71□□□□□ -0.69
COL3A1-203ENST00000450867 NHLRC4P0CG21 123 aaPredicted RBP10.71□□□□□ -0.69
COL3A1-203ENST00000450867 CAV2P51636 162 aa10.71□□□□□ -0.69
COL3A1-203ENST00000450867 SELENOTP62341 195 aa10.71□□□□□ -0.69
COL3A1-203ENST00000450867 SLC38A11Q08AI6 406 aa10.71□□□□□ -0.69
COL3A1-203ENST00000450867 VWC2Q2TAL6 325 aa10.71□□□□□ -0.69
COL3A1-203ENST00000450867 ODF3L2Q3SX64 289 aa10.71□□□□□ -0.69
COL3A1-203ENST00000450867 TMEM252Q8N6L7 170 aa10.71□□□□□ -0.69
COL3A1-203ENST00000450867 BPIFCQ8NFQ6 507 aa10.71□□□□□ -0.69
COL3A1-203ENST00000450867 PPP1R1CQ8WVI7 109 aa10.71□□□□□ -0.69
COL3A1-203ENST00000450867 GRAMD2BQ96HH9 432 aa10.71□□□□□ -0.69
COL3A1-203ENST00000450867 HELTA6NFD8 242 aa10.7□□□□□ -0.7
COL3A1-203ENST00000450867 OR11H12B2RN74 326 aa10.7□□□□□ -0.7
COL3A1-203ENST00000450867 RLN2P04090 185 aa10.7□□□□□ -0.7
COL3A1-203ENST00000450867 PLP1P60201 277 aa10.7□□□□□ -0.7
COL3A1-203ENST00000450867 RRAS2P62070 204 aaPredicted RBP10.7□□□□□ -0.7
COL3A1-203ENST00000450867 TEPPQ6URK8 271 aa10.7□□□□□ -0.7
COL3A1-203ENST00000450867 CYP2G1PQ6ZSU1 146 aa10.7□□□□□ -0.7
COL3A1-203ENST00000450867 STX12Q86Y82 276 aa10.7□□□□□ -0.7
COL3A1-203ENST00000450867 STPG3Q8N7X2 389 aa10.7□□□□□ -0.7
COL3A1-203ENST00000450867 PFDN2Q9UHV9 154 aa10.7□□□□□ -0.7
COL3A1-203ENST00000450867 HUWE1Q7Z6Z7 4374 aaKnown RBP10.7□□□□□ -0.7
COL3A1-203ENST00000450867 IGHV3-66A0A0C4DH42 116 aa10.69□□□□□ -0.7
COL3A1-203ENST00000450867 SMCO3A2RU48 225 aa10.69□□□□□ -0.7
COL3A1-203ENST00000450867 CST7O76096 145 aa10.69□□□□□ -0.7
COL3A1-203ENST00000450867 MPC2O95563 127 aa10.69□□□□□ -0.7
COL3A1-203ENST00000450867 S100A11P31949 105 aa10.69□□□□□ -0.7
COL3A1-203ENST00000450867 BCAP31P51572 246 aa10.69□□□□□ -0.7
COL3A1-203ENST00000450867 CMC4P56277 68 aaPredicted RBP10.69□□□□□ -0.7
COL3A1-203ENST00000450867 PAFAH1B2P68402 229 aa10.69□□□□□ -0.7
COL3A1-203ENST00000450867 HBG1P69891 147 aa10.69□□□□□ -0.7
COL3A1-203ENST00000450867 HBG2P69892 147 aa10.69□□□□□ -0.7
COL3A1-203ENST00000450867 OR2F1Q13607 317 aa10.69□□□□□ -0.7
COL3A1-203ENST00000450867 C1orf194Q5T5A4 169 aa10.69□□□□□ -0.7
COL3A1-203ENST00000450867 TMEM182Q6ZP80 229 aaPredicted RBP10.69□□□□□ -0.7
COL3A1-203ENST00000450867 SBSPONQ8IVN8 264 aa10.69□□□□□ -0.7
COL3A1-203ENST00000450867 DEFB125Q8N687 156 aa10.69□□□□□ -0.7
COL3A1-203ENST00000450867 RNF126Q9BV68 326 aa10.69□□□□□ -0.7
COL3A1-203ENST00000450867 WFDC10AQ9H1F0 79 aa10.69□□□□□ -0.7
COL3A1-203ENST00000450867 MS4A6AQ9H2W1 248 aa10.69□□□□□ -0.7
COL3A1-203ENST00000450867 OR5AC2Q9NZP5 309 aa10.69□□□□□ -0.7
COL3A1-203ENST00000450867 K7EQG2 157 aa10.68□□□□□ -0.7
COL3A1-203ENST00000450867 PET100P0DJ07 73 aa10.68□□□□□ -0.7
COL3A1-203ENST00000450867 LYL1P12980 280 aa10.68□□□□□ -0.7
COL3A1-203ENST00000450867 CXCL3P19876 107 aa10.68□□□□□ -0.7
COL3A1-203ENST00000450867 AP2S1P53680 142 aaPredicted RBP10.68□□□□□ -0.7
COL3A1-203ENST00000450867 LYZP61626 148 aa10.68□□□□□ -0.7
COL3A1-203ENST00000450867 ATP6V1FQ16864 119 aa10.68□□□□□ -0.7
COL3A1-203ENST00000450867 DCANP1Q8TF63 244 aa10.68□□□□□ -0.7
COL3A1-203ENST00000450867 CHAC2Q8WUX2 184 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms