RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 EGR4Q05215 589 aa1.82□□□□□ -2.12
USP53-202ENST00000450251 DUX4L9Q6RFH8 374 aaPredicted RBP1.82□□□□□ -2.12
USP53-202ENST00000450251 MIR17HGQ75NE6 70 aa1.82□□□□□ -2.12
USP53-202ENST00000450251 C5orf24Q7Z6I8 188 aa1.82□□□□□ -2.12
USP53-202ENST00000450251 LILRA3Q8N6C8 439 aaPredicted RBP1.82□□□□□ -2.12
USP53-202ENST00000450251 OSR1Q8TAX0 266 aaPredicted RBP1.82□□□□□ -2.12
USP53-202ENST00000450251 AMELYQ99218 206 aa1.82□□□□□ -2.12
USP53-202ENST00000450251 TMEM243Q9BU79 118 aa1.82□□□□□ -2.12
USP53-202ENST00000450251 Q9H3A6 140 aa1.82□□□□□ -2.12
USP53-202ENST00000450251 VPREB3Q9UKI3 123 aa1.82□□□□□ -2.12
USP53-202ENST00000450251 MCM3APO60318 1980 aa1.82□□□□□ -2.12
USP53-202ENST00000450251 hADV29S1A0JD25 119 aa1.82□□□□□ -2.12
USP53-202ENST00000450251 TCRAP04437 139 aa1.82□□□□□ -2.12
USP53-202ENST00000450251 GRPP07492 148 aa1.82□□□□□ -2.12
USP53-202ENST00000450251 ZNF32P17041 273 aa1.82□□□□□ -2.12
USP53-202ENST00000450251 MALP21145 153 aa1.82□□□□□ -2.12
USP53-202ENST00000450251 CRYGSP22914 178 aa1.82□□□□□ -2.12
USP53-202ENST00000450251 IFI27P40305 119 aaPredicted RBP1.82□□□□□ -2.12
USP53-202ENST00000450251 FOXC1Q12948 553 aa1.82□□□□□ -2.12
USP53-202ENST00000450251 RUNX3Q13761 415 aa1.82□□□□□ -2.12
USP53-202ENST00000450251 ZNF726P1Q15940 193 aa1.82□□□□□ -2.12
USP53-202ENST00000450251 LDLRAD1Q5T700 205 aa1.82□□□□□ -2.12
USP53-202ENST00000450251 LINC00305Q7Z4B0 112 aa1.82□□□□□ -2.12
USP53-202ENST00000450251 ZNF329Q86UD4 541 aa1.82□□□□□ -2.12
USP53-202ENST00000450251 KLHDC9Q8NEP7 349 aa1.82□□□□□ -2.12
USP53-202ENST00000450251 TSACCQ96A04 125 aaPredicted RBP1.82□□□□□ -2.12
USP53-202ENST00000450251 RNF125Q96EQ8 232 aa1.82□□□□□ -2.12
USP53-202ENST00000450251 TRGV9Q99603 122 aa1.82□□□□□ -2.12
USP53-202ENST00000450251 SCRT1Q9BWW7 348 aa1.82□□□□□ -2.12
USP53-202ENST00000450251 PRDM6Q9NQX0 595 aa1.82□□□□□ -2.12
USP53-202ENST00000450251 SCN3AQ9NY46 2000 aa1.82□□□□□ -2.12
USP53-202ENST00000450251 LOC102723996A0A087X1L8 192 aa1.82□□□□□ -2.12
USP53-202ENST00000450251 TRBV6-1A0A0K0K1D8 114 aa1.82□□□□□ -2.12
USP53-202ENST00000450251 TRBV10-2A0A0K0K1G8 114 aa1.82□□□□□ -2.12
USP53-202ENST00000450251 F8WDY8 70 aa1.82□□□□□ -2.12
USP53-202ENST00000450251 SOCS3O14543 225 aa1.82□□□□□ -2.12
USP53-202ENST00000450251 MGST3O14880 152 aa1.82□□□□□ -2.12
USP53-202ENST00000450251 WIPF1O43516 503 aa1.82□□□□□ -2.12
USP53-202ENST00000450251 CD38P28907 300 aa1.82□□□□□ -2.12
USP53-202ENST00000450251 ID1P41134 155 aa1.82□□□□□ -2.12
USP53-202ENST00000450251 GNG5P63218 68 aa1.82□□□□□ -2.12
USP53-202ENST00000450251 ODF1Q14990 250 aa1.82□□□□□ -2.12
USP53-202ENST00000450251 PRSS53Q2L4Q9 553 aa1.82□□□□□ -2.12
USP53-202ENST00000450251 DEFB110Q30KQ9 67 aa1.82□□□□□ -2.12
USP53-202ENST00000450251 SPINK9Q5DT21 86 aa1.82□□□□□ -2.12
USP53-202ENST00000450251 TMEM240Q5SV17 173 aa1.82□□□□□ -2.12
USP53-202ENST00000450251 VN1R4Q7Z5H5 301 aa1.82□□□□□ -2.12
USP53-202ENST00000450251 C1QL2Q7Z5L3 287 aa1.82□□□□□ -2.12
USP53-202ENST00000450251 FAM57AQ8TBR7 257 aa1.82□□□□□ -2.12
USP53-202ENST00000450251 CT55Q8WUE5 264 aa1.82□□□□□ -2.12
USP53-202ENST00000450251 ZNF488Q96MN9 340 aa1.82□□□□□ -2.12
USP53-202ENST00000450251 ZNF747Q9BV97 191 aa1.82□□□□□ -2.12
USP53-202ENST00000450251 PAPPA2Q9BXP8 1791 aa1.82□□□□□ -2.12
USP53-202ENST00000450251 PLXNA2O75051 1894 aa1.82□□□□□ -2.12
USP53-202ENST00000450251 FAM236AA0A1B0GUQ0 79 aa1.82□□□□□ -2.12
USP53-202ENST00000450251 FAM236BA0A1B0GV22 79 aa1.82□□□□□ -2.12
USP53-202ENST00000450251 NDUFS7O75251 213 aa1.82□□□□□ -2.12
USP53-202ENST00000450251 CD3EP07766 207 aa1.82□□□□□ -2.12
USP53-202ENST00000450251 B4GALT1P15291 398 aa1.82□□□□□ -2.12
USP53-202ENST00000450251 CSRP1P21291 193 aaKnown RBP1.82□□□□□ -2.12
USP53-202ENST00000450251 PSG7Q13046 419 aa1.82□□□□□ -2.12
USP53-202ENST00000450251 C19orf54Q5BKX5 351 aa1.82□□□□□ -2.12
USP53-202ENST00000450251 FAM219BQ5XKK7 198 aa1.82□□□□□ -2.12
USP53-202ENST00000450251 C17orf99Q6UX52 265 aa1.82□□□□□ -2.12
USP53-202ENST00000450251 TREML4Q6UXN2 200 aa1.82□□□□□ -2.12
USP53-202ENST00000450251 ABHD12Q8N2K0 398 aa1.82□□□□□ -2.12
USP53-202ENST00000450251 DLL3Q9NYJ7 618 aa1.82□□□□□ -2.12
USP53-202ENST00000450251 PEMTQ9UBM1 199 aa1.82□□□□□ -2.12
USP53-202ENST00000450251 PRO0628Q9UI54 55 aa1.82□□□□□ -2.12
USP53-202ENST00000450251 SIGLEC9Q9Y336 463 aa1.82□□□□□ -2.12
USP53-202ENST00000450251 RIF1Q5UIP0 2472 aaKnown RBP1.82□□□□□ -2.12
USP53-202ENST00000450251 FAM186AA6NE01 2351 aa1.82□□□□□ -2.12
USP53-202ENST00000450251 A0A087WX48 190 aa1.82□□□□□ -2.12
USP53-202ENST00000450251 TMSB15BA0A087X1C1 80 aa1.82□□□□□ -2.12
USP53-202ENST00000450251 FAM236DA0A1B0GTK5 79 aa1.82□□□□□ -2.12
USP53-202ENST00000450251 IQCF6A8MYZ5 107 aa1.82□□□□□ -2.12
USP53-202ENST00000450251 D6R8Y8 96 aa1.82□□□□□ -2.12
USP53-202ENST00000450251 F5H697 171 aa1.82□□□□□ -2.12
USP53-202ENST00000450251 UPK2O00526 184 aa1.82□□□□□ -2.12
USP53-202ENST00000450251 TM4SF5O14894 197 aa1.82□□□□□ -2.12
USP53-202ENST00000450251 NDUFB3O43676 98 aa1.82□□□□□ -2.12
USP53-202ENST00000450251 FAM236CP0DP71 79 aa1.82□□□□□ -2.12
USP53-202ENST00000450251 CD33P20138 364 aa1.82□□□□□ -2.12
USP53-202ENST00000450251 DUTP33316 252 aaKnown RBP1.82□□□□□ -2.12
USP53-202ENST00000450251 MRPS21P82921 87 aaKnown RBP1.82□□□□□ -2.12
USP53-202ENST00000450251 PRCDQ00LT1 54 aa1.82□□□□□ -2.12
USP53-202ENST00000450251 CSRP2Q16527 193 aa1.82□□□□□ -2.12
USP53-202ENST00000450251 SLC25A53Q5H9E4 307 aa1.82□□□□□ -2.12
USP53-202ENST00000450251 AMTNQ6UX39 209 aa1.82□□□□□ -2.12
USP53-202ENST00000450251 Q86TA4 180 aa1.82□□□□□ -2.12
USP53-202ENST00000450251 C8orf31Q8N9H6 132 aa1.82□□□□□ -2.12
USP53-202ENST00000450251 LINC01555Q8NAE3 123 aa1.82□□□□□ -2.12
USP53-202ENST00000450251 ZNF114Q8NC26 417 aa1.82□□□□□ -2.12
USP53-202ENST00000450251 CARD19Q96LW7 228 aa1.82□□□□□ -2.12
USP53-202ENST00000450251 TM2D2Q9BX73 214 aa1.82□□□□□ -2.12
USP53-202ENST00000450251 TTC3P53804 2025 aa1.81□□□□□ -2.12
USP53-202ENST00000450251 IGHG2P01859 326 aa1.81□□□□□ -2.12
USP53-202ENST00000450251 CT62P0C5K7 136 aa1.81□□□□□ -2.12
USP53-202ENST00000450251 EGR1P18146 543 aa1.81□□□□□ -2.12
USP53-202ENST00000450251 HERVK_113P63121 156 aa1.81□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms