RNA–Protein interactions for RNA: ENST00000447654.5

HMGA1-205, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-205ENST00000447654 FCGR2BP31994 310 aaPredicted RBP15.59■□□□□ 0.09
HMGA1-205ENST00000447654 ZNF146Q15072 292 aa15.59■□□□□ 0.09
HMGA1-205ENST00000447654 OR1C1Q15619 314 aa15.59■□□□□ 0.09
HMGA1-205ENST00000447654 TMUB1Q9BVT8 246 aa15.59■□□□□ 0.09
HMGA1-205ENST00000447654 INSIG2Q9Y5U4 225 aa15.59■□□□□ 0.09
HMGA1-205ENST00000447654 PIEZO1Q92508 2521 aa15.58■□□□□ 0.09
HMGA1-205ENST00000447654 hADV38S2A0JD32 116 aa15.58■□□□□ 0.08
HMGA1-205ENST00000447654 LINC00473A8K010 186 aa15.58■□□□□ 0.08
HMGA1-205ENST00000447654 PEX7O00628 323 aa15.58■□□□□ 0.08
HMGA1-205ENST00000447654 MGST3O14880 152 aa15.58■□□□□ 0.08
HMGA1-205ENST00000447654 ERVK-16P61578 105 aa15.58■□□□□ 0.08
HMGA1-205ENST00000447654 ABHD17BQ5VST6 288 aa15.58■□□□□ 0.08
HMGA1-205ENST00000447654 ABHD12Q8N2K0 398 aa15.58■□□□□ 0.08
HMGA1-205ENST00000447654 SLC25A33Q9BSK2 321 aa15.58■□□□□ 0.08
HMGA1-205ENST00000447654 PRSS22Q9GZN4 317 aa15.58■□□□□ 0.08
HMGA1-205ENST00000447654 ZNF492Q9P255 531 aa15.58■□□□□ 0.08
HMGA1-205ENST00000447654 ERG28Q9UKR5 140 aa15.58■□□□□ 0.08
HMGA1-205ENST00000447654 SELENOKQ9Y6D0 94 aa15.58■□□□□ 0.08
HMGA1-205ENST00000447654 H0Y8G0 127 aa15.58■□□□□ 0.08
HMGA1-205ENST00000447654 FOXG1P55316 489 aaPredicted RBP15.58■□□□□ 0.08
HMGA1-205ENST00000447654 RBPMS2Q6ZRY4 209 aaKnown RBP15.58■□□□□ 0.08
HMGA1-205ENST00000447654 UBALD1Q8TB05 177 aa15.58■□□□□ 0.08
HMGA1-205ENST00000447654 FAM173AQ9BQD7 235 aa15.58■□□□□ 0.08
HMGA1-205ENST00000447654 TTTY12Q9BZ98 90 aa15.58■□□□□ 0.08
HMGA1-205ENST00000447654 TCF19Q9Y242 345 aa15.58■□□□□ 0.08
HMGA1-205ENST00000447654 KBTBD11-OT1A0A1B0GTJ5 212 aa15.57■□□□□ 0.08
HMGA1-205ENST00000447654 C12orf77C9JDV5 145 aa15.57■□□□□ 0.08
HMGA1-205ENST00000447654 E9PLD3 99 aa15.57■□□□□ 0.08
HMGA1-205ENST00000447654 CHEK1O14757 476 aa15.57■□□□□ 0.08
HMGA1-205ENST00000447654 NGFP01138 241 aa15.57■□□□□ 0.08
HMGA1-205ENST00000447654 ERVK11-1P61568 191 aa15.57■□□□□ 0.08
HMGA1-205ENST00000447654 Q6ZS92 163 aa15.57■□□□□ 0.08
HMGA1-205ENST00000447654 MCRIP2Q9BUT9 160 aaKnown RBP15.57■□□□□ 0.08
HMGA1-205ENST00000447654 POLDIP2Q9Y2S7 368 aa15.57■□□□□ 0.08
HMGA1-205ENST00000447654 ATP5IP56385 69 aaPredicted RBP15.56■□□□□ 0.08
HMGA1-205ENST00000447654 C3AR1Q16581 482 aa15.56■□□□□ 0.08
HMGA1-205ENST00000447654 USF3Q68DE3 2245 aa15.56■□□□□ 0.08
HMGA1-205ENST00000447654 HAX1O00165 279 aa15.56■□□□□ 0.08
HMGA1-205ENST00000447654 C8orf86Q6ZUL3 223 aa15.56■□□□□ 0.08
HMGA1-205ENST00000447654 RPRMLQ8N4K4 120 aa15.56■□□□□ 0.08
HMGA1-205ENST00000447654 ATP6V0E2Q8NHE4 81 aa15.56■□□□□ 0.08
HMGA1-205ENST00000447654 PHLDA1Q8WV24 401 aaPredicted RBP15.56■□□□□ 0.08
HMGA1-205ENST00000447654 ZNF292O60281 2723 aa15.55■□□□□ 0.08
HMGA1-205ENST00000447654 SSBP2P81877 361 aaPredicted RBP15.55■□□□□ 0.08
HMGA1-205ENST00000447654 KLRD1Q13241 179 aa15.55■□□□□ 0.08
HMGA1-205ENST00000447654 WFDC2Q14508 124 aa15.55■□□□□ 0.08
HMGA1-205ENST00000447654 TUSC5Q8IXB3 177 aa15.55■□□□□ 0.08
HMGA1-205ENST00000447654 GATD1Q8NB37 220 aa15.55■□□□□ 0.08
HMGA1-205ENST00000447654 ZNF503-AS2A6NEH8 195 aa15.54■□□□□ 0.08
HMGA1-205ENST00000447654 KIR2DS2P43631 304 aa15.54■□□□□ 0.08
HMGA1-205ENST00000447654 UBE2L3P68036 154 aaKnown RBP15.54■□□□□ 0.08
HMGA1-205ENST00000447654 ZNF329Q86UD4 541 aa15.54■□□□□ 0.08
HMGA1-205ENST00000447654 FAM110AQ9BQ89 295 aa15.54■□□□□ 0.08
HMGA1-205ENST00000447654 PSG8Q9UQ74 426 aa15.54■□□□□ 0.08
HMGA1-205ENST00000447654 KLF12Q9Y4X4 402 aa15.54■□□□□ 0.08
HMGA1-205ENST00000447654 SRRM4A7MD48 611 aaKnown RBP15.53■□□□□ 0.08
HMGA1-205ENST00000447654 A0A096LPE4 126 aa15.53■□□□□ 0.08
HMGA1-205ENST00000447654 A0A1W2PPZ6 126 aa15.53■□□□□ 0.08
HMGA1-205ENST00000447654 NCR2O95944 276 aa15.53■□□□□ 0.08
HMGA1-205ENST00000447654 SRSF1Q07955 248 aaKnown RBP eCLIP15.53■□□□□ 0.08
HMGA1-205ENST00000447654 C8orf46Q8TAG6 207 aa15.53■□□□□ 0.08
HMGA1-205ENST00000447654 ENY2Q9NPA8 101 aa15.53■□□□□ 0.08
HMGA1-205ENST00000447654 LINC00312Q9Y6C7 94 aa15.53■□□□□ 0.08
HMGA1-205ENST00000447654 IGKV3D-15A0A087WSY6 115 aa15.52■□□□□ 0.08
HMGA1-205ENST00000447654 GAGE5Q13069 117 aa15.52■□□□□ 0.08
HMGA1-205ENST00000447654 GAGE6Q13070 117 aa15.52■□□□□ 0.08
HMGA1-205ENST00000447654 INO80CQ6PI98 192 aaPredicted RBP15.52■□□□□ 0.08
HMGA1-205ENST00000447654 FAM167A-AS1Q96KT0 104 aa15.52■□□□□ 0.08
HMGA1-205ENST00000447654 LINC00479Q96M42 142 aa15.52■□□□□ 0.08
HMGA1-205ENST00000447654 TM2D2Q9BX73 214 aa15.52■□□□□ 0.08
HMGA1-205ENST00000447654 DIDO1Q9BTC0 2240 aaKnown RBP15.52■□□□□ 0.07
HMGA1-205ENST00000447654 C5orf49A4QMS7 147 aa15.52■□□□□ 0.07
HMGA1-205ENST00000447654 C15orf61A6NNL5 157 aa15.52■□□□□ 0.07
HMGA1-205ENST00000447654 APOHP02749 345 aaPredicted RBP15.52■□□□□ 0.07
HMGA1-205ENST00000447654 FOXF2Q12947 444 aa15.52■□□□□ 0.07
HMGA1-205ENST00000447654 MLST8Q9BVC4 326 aa15.52■□□□□ 0.07
HMGA1-205ENST00000447654 RTL8AQ9BWD3 113 aa15.52■□□□□ 0.07
HMGA1-205ENST00000447654 A0A1B0GW15 77 aa15.51■□□□□ 0.07
HMGA1-205ENST00000447654 C19orf71A6NCJ1 209 aa15.51■□□□□ 0.07
HMGA1-205ENST00000447654 SHISA9B4DS77 424 aa15.51■□□□□ 0.07
HMGA1-205ENST00000447654 MRPL33O75394 65 aaKnown RBP15.51■□□□□ 0.07
HMGA1-205ENST00000447654 CCL2P13500 99 aa15.51■□□□□ 0.07
HMGA1-205ENST00000447654 VCX2Q9H322 139 aa15.51■□□□□ 0.07
HMGA1-205ENST00000447654 FOXA2Q9Y261 457 aaPredicted RBP15.51■□□□□ 0.07
HMGA1-205ENST00000447654 ZNF318Q5VUA4 2279 aa15.51■□□□□ 0.07
HMGA1-205ENST00000447654 VSTM5A8MXK1 200 aa15.51■□□□□ 0.07
HMGA1-205ENST00000447654 FCGR3BO75015 233 aa15.51■□□□□ 0.07
HMGA1-205ENST00000447654 P01737 135 aa15.51■□□□□ 0.07
HMGA1-205ENST00000447654 SPINK8P0C7L1 97 aa15.51■□□□□ 0.07
HMGA1-205ENST00000447654 HSPE1P61604 102 aaKnown RBP15.51■□□□□ 0.07
HMGA1-205ENST00000447654 ETDBQ3ZM63 59 aa15.51■□□□□ 0.07
HMGA1-205ENST00000447654 GAGE13Q4V321 117 aa15.51■□□□□ 0.07
HMGA1-205ENST00000447654 PIP4P2Q8N4L2 257 aa15.51■□□□□ 0.07
HMGA1-205ENST00000447654 MDS2Q8NDY4 140 aa15.51■□□□□ 0.07
HMGA1-205ENST00000447654 PLPPR2Q96GM1 343 aa15.51■□□□□ 0.07
HMGA1-205ENST00000447654 SLC25A2Q9BXI2 301 aa15.51■□□□□ 0.07
HMGA1-205ENST00000447654 MGAQ8IWI9 3026 aa15.5■□□□□ 0.07
HMGA1-205ENST00000447654 MEOX1P50221 254 aa15.5■□□□□ 0.07
HMGA1-205ENST00000447654 BCL6BQ8N143 479 aaPredicted RBP15.5■□□□□ 0.07
HMGA1-205ENST00000447654 OR9G1Q8NH87 305 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 112.9 ms