RNA–Protein interactions for RNA: ENST00000446716.5

ATG9A-215, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 5,245 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-215ENST00000446716 A0A1W2PRE2 83 aa14.59□□□□□ -0.07
ATG9A-215ENST00000446716 ETV2O00321 342 aaPredicted RBP14.59□□□□□ -0.07
ATG9A-215ENST00000446716 PSG1P11464 419 aa14.59□□□□□ -0.07
ATG9A-215ENST00000446716 RPL15P61313 204 aaKnown RBP14.59□□□□□ -0.07
ATG9A-215ENST00000446716 BTCP35070 178 aa14.59□□□□□ -0.07
ATG9A-215ENST00000446716 LDLRAD4O15165 306 aa14.59□□□□□ -0.07
ATG9A-215ENST00000446716 RUSC1-AS1Q66K80 236 aa14.59□□□□□ -0.07
ATG9A-215ENST00000446716 TOMM7Q9P0U1 55 aa14.59□□□□□ -0.07
ATG9A-215ENST00000446716 TRBV7-1A0A0A6YYK4 115 aa14.59□□□□□ -0.07
ATG9A-215ENST00000446716 ZNF688P0C7X2 276 aa14.59□□□□□ -0.07
ATG9A-215ENST00000446716 OR13C6PQ8NH95 151 aa14.59□□□□□ -0.07
ATG9A-215ENST00000446716 TRBV6-6A0A0A6YYG2 114 aa14.58□□□□□ -0.08
ATG9A-215ENST00000446716 CR1LQ2VPA4 569 aa14.58□□□□□ -0.08
ATG9A-215ENST00000446716 RNF144BQ7Z419 303 aa14.58□□□□□ -0.08
ATG9A-215ENST00000446716 LHFPL1Q86WI0 220 aa14.58□□□□□ -0.08
ATG9A-215ENST00000446716 ARL6IP6Q8N6S5 226 aa14.58□□□□□ -0.08
ATG9A-215ENST00000446716 SCGB3A1Q96QR1 104 aa14.58□□□□□ -0.08
ATG9A-215ENST00000446716 BEX4Q9NWD9 120 aaPredicted RBP14.58□□□□□ -0.08
ATG9A-215ENST00000446716 RNASE1P07998 156 aaKnown RBP14.58□□□□□ -0.08
ATG9A-215ENST00000446716 FAM215AQ9Y5M1 114 aa14.58□□□□□ -0.08
ATG9A-215ENST00000446716 KIAA2026Q5HYC2 2103 aa14.58□□□□□ -0.08
ATG9A-215ENST00000446716 CUL9Q8IWT3 2517 aa14.58□□□□□ -0.08
ATG9A-215ENST00000446716 LOC107984156A0A0G2JMH3 177 aa14.58□□□□□ -0.08
ATG9A-215ENST00000446716 OR11H12B2RN74 326 aa14.58□□□□□ -0.08
ATG9A-215ENST00000446716 ARL17AQ8IVW1 177 aa14.58□□□□□ -0.08
ATG9A-215ENST00000446716 OR11H1Q8NG94 326 aa14.58□□□□□ -0.08
ATG9A-215ENST00000446716 OR11H2Q8NH07 326 aa14.58□□□□□ -0.08
ATG9A-215ENST00000446716 MRAP2Q96G30 205 aa14.58□□□□□ -0.08
ATG9A-215ENST00000446716 PHF3Q92576 2039 aaKnown RBP14.57□□□□□ -0.08
ATG9A-215ENST00000446716 TRAV3A0A0B4J244 114 aa14.57□□□□□ -0.08
ATG9A-215ENST00000446716 UBE2E1P51965 193 aa14.57□□□□□ -0.08
ATG9A-215ENST00000446716 CCL20P78556 96 aa14.57□□□□□ -0.08
ATG9A-215ENST00000446716 PET117Q6UWS5 81 aa14.57□□□□□ -0.08
ATG9A-215ENST00000446716 TREML4Q6UXN2 200 aa14.57□□□□□ -0.08
ATG9A-215ENST00000446716 SPOCK3Q9BQ16 436 aa14.57□□□□□ -0.08
ATG9A-215ENST00000446716 TDGF1P13385 188 aa14.57□□□□□ -0.08
ATG9A-215ENST00000446716 TMEM160Q9NX00 188 aa14.57□□□□□ -0.08
ATG9A-215ENST00000446716 GCSAMLQ5JQS6 135 aa14.57□□□□□ -0.08
ATG9A-215ENST00000446716 LY6G6FQ5SQ64 297 aa14.57□□□□□ -0.08
ATG9A-215ENST00000446716 C5orf24Q7Z6I8 188 aa14.57□□□□□ -0.08
ATG9A-215ENST00000446716 SMIM12Q96EX1 92 aa14.57□□□□□ -0.08
ATG9A-215ENST00000446716 ZNF414Q96IQ9 312 aa14.57□□□□□ -0.08
ATG9A-215ENST00000446716 ORMDL3Q8N138 153 aa14.57□□□□□ -0.08
ATG9A-215ENST00000446716 RNF166Q96A37 237 aaPredicted RBP14.57□□□□□ -0.08
ATG9A-215ENST00000446716 F11RQ9Y624 299 aaKnown RBP14.57□□□□□ -0.08
ATG9A-215ENST00000446716 HIGD1CA8MV81 97 aa14.56□□□□□ -0.08
ATG9A-215ENST00000446716 H0YIZ8 118 aa14.56□□□□□ -0.08
ATG9A-215ENST00000446716 TMEM50AO95807 157 aa14.56□□□□□ -0.08
ATG9A-215ENST00000446716 APOHP02749 345 aaPredicted RBP14.56□□□□□ -0.08
ATG9A-215ENST00000446716 SPATA45Q537H7 98 aa14.56□□□□□ -0.08
ATG9A-215ENST00000446716 OR10J3Q5JRS4 329 aa14.56□□□□□ -0.08
ATG9A-215ENST00000446716 PMS2P5A8MQ11 134 aa14.56□□□□□ -0.08
ATG9A-215ENST00000446716 DNLZQ5SXM8 178 aa14.56□□□□□ -0.08
ATG9A-215ENST00000446716 MRPS16Q9Y3D3 137 aaKnown RBP14.56□□□□□ -0.08
ATG9A-215ENST00000446716 LINC00473A8K010 186 aa14.56□□□□□ -0.08
ATG9A-215ENST00000446716 Q71RC1 249 aaPredicted RBP14.56□□□□□ -0.08
ATG9A-215ENST00000446716 ATP5LO75964 103 aa14.55□□□□□ -0.08
ATG9A-215ENST00000446716 LHFPL4Q7Z7J7 247 aa14.55□□□□□ -0.08
ATG9A-215ENST00000446716 TRAV5A0A0B4J249 113 aa14.55□□□□□ -0.08
ATG9A-215ENST00000446716 H3BRM9 83 aa14.55□□□□□ -0.08
ATG9A-215ENST00000446716 UQCRFS1P47985 274 aa14.55□□□□□ -0.08
ATG9A-215ENST00000446716 NDPQ00604 133 aa14.55□□□□□ -0.08
ATG9A-215ENST00000446716 PPIFP30405 207 aaKnown RBP14.55□□□□□ -0.08
ATG9A-215ENST00000446716 PKIAP61925 76 aa14.55□□□□□ -0.08
ATG9A-215ENST00000446716 ERASQ7Z444 233 aa14.55□□□□□ -0.08
ATG9A-215ENST00000446716 DOCK10Q96BY6 2186 aa14.55□□□□□ -0.08
ATG9A-215ENST00000446716 CFAP161Q6P656 301 aa14.55□□□□□ -0.08
ATG9A-215ENST00000446716 IGHV1-69DA0A0B4J2H0 117 aa14.54□□□□□ -0.08
ATG9A-215ENST00000446716 IGKV1-5P01602 117 aa14.54□□□□□ -0.08
ATG9A-215ENST00000446716 IGHV1-69P01742 117 aa14.54□□□□□ -0.08
ATG9A-215ENST00000446716 RPL35AP18077 110 aaKnown RBP14.54□□□□□ -0.08
ATG9A-215ENST00000446716 TMEM183AQ8IXX5 376 aa14.54□□□□□ -0.08
ATG9A-215ENST00000446716 UBE2DNLQ8IWF7 75 aa14.54□□□□□ -0.08
ATG9A-215ENST00000446716 RNASE7Q9H1E1 156 aaKnown RBP14.54□□□□□ -0.08
ATG9A-215ENST00000446716 CACNA1AO00555 2505 aa14.54□□□□□ -0.08
ATG9A-215ENST00000446716 FAM223BA6NKX1 122 aa14.54□□□□□ -0.08
ATG9A-215ENST00000446716 SLC25A34Q6PIV7 304 aa14.54□□□□□ -0.08
ATG9A-215ENST00000446716 FAM223AQ8IWN6 122 aa14.54□□□□□ -0.08
ATG9A-215ENST00000446716 SCRT1Q9BWW7 348 aa14.54□□□□□ -0.08
ATG9A-215ENST00000446716 GGTLC1Q9BX51 225 aa14.54□□□□□ -0.08
ATG9A-215ENST00000446716 DTX2Q86UW9 622 aa14.54□□□□□ -0.08
ATG9A-215ENST00000446716 ST20Q9HBF5 79 aa14.54□□□□□ -0.08
ATG9A-215ENST00000446716 SLC25A39Q9BZJ4 359 aaPredicted RBP14.53□□□□□ -0.08
ATG9A-215ENST00000446716 ZNF581Q9P0T4 197 aa14.53□□□□□ -0.08
ATG9A-215ENST00000446716 PEF1Q9UBV8 284 aaKnown RBP14.53□□□□□ -0.08
ATG9A-215ENST00000446716 WT1P19544 449 aaPredicted RBP14.53□□□□□ -0.08
ATG9A-215ENST00000446716 GATA4P43694 442 aa14.53□□□□□ -0.08
ATG9A-215ENST00000446716 TRGV9Q99603 122 aa14.53□□□□□ -0.08
ATG9A-215ENST00000446716 HINT1P49773 126 aaPredicted RBP14.53□□□□□ -0.08
ATG9A-215ENST00000446716 LBHQ53QV2 105 aaPredicted RBP14.53□□□□□ -0.08
ATG9A-215ENST00000446716 IZUMO1RA6ND01 250 aa14.53□□□□□ -0.08
ATG9A-215ENST00000446716 C9orf139Q6ZV77 190 aa14.53□□□□□ -0.08
ATG9A-215ENST00000446716 Q8TCH9 128 aa14.53□□□□□ -0.08
ATG9A-215ENST00000446716 PRB4P10163 310 aaPredicted RBP14.52□□□□□ -0.08
ATG9A-215ENST00000446716 IMMP2LQ96T52 175 aa14.52□□□□□ -0.08
ATG9A-215ENST00000446716 GPR61Q9BZJ8 451 aa14.52□□□□□ -0.08
ATG9A-215ENST00000446716 CRPP02741 224 aa14.52□□□□□ -0.08
ATG9A-215ENST00000446716 ZNF415Q09FC8 603 aa14.52□□□□□ -0.08
ATG9A-215ENST00000446716 JOSD1Q15040 202 aaPredicted RBP14.52□□□□□ -0.08
ATG9A-215ENST00000446716 ACTL10Q5JWF8 245 aa14.52□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms