RNA–Protein interactions for RNA: ENST00000444983.6

CCNE1-203, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-203ENST00000444983 NUDT19A8MXV4 375 aa11.58□□□□□ -0.56
CCNE1-203ENST00000444983 LINC01619G3V211 115 aa11.58□□□□□ -0.56
CCNE1-203ENST00000444983 SCGB2A1O75556 95 aa11.58□□□□□ -0.56
CCNE1-203ENST00000444983 RD3LP0DJH9 198 aa11.58□□□□□ -0.56
CCNE1-203ENST00000444983 ATP6V0CP27449 155 aa11.58□□□□□ -0.56
CCNE1-203ENST00000444983 HOXD3P31249 432 aaPredicted RBP11.58□□□□□ -0.56
CCNE1-203ENST00000444983 RELQ04864 619 aaPredicted RBP11.58□□□□□ -0.56
CCNE1-203ENST00000444983 ZNF616Q08AN1 781 aa11.58□□□□□ -0.56
CCNE1-203ENST00000444983 KLF5Q13887 457 aaPredicted RBP11.58□□□□□ -0.56
CCNE1-203ENST00000444983 SLC51BQ86UW2 128 aa11.58□□□□□ -0.56
CCNE1-203ENST00000444983 PSMG3Q9BT73 122 aaPredicted RBP11.58□□□□□ -0.56
CCNE1-203ENST00000444983 IGHV3-35A0A0C4DH35 117 aa11.57□□□□□ -0.56
CCNE1-203ENST00000444983 WI2-2373I1.2A0A1W2PRP0 233 aa11.57□□□□□ -0.56
CCNE1-203ENST00000444983 CCL24O00175 119 aa11.57□□□□□ -0.56
CCNE1-203ENST00000444983 NDUFA4O00483 81 aa11.57□□□□□ -0.56
CCNE1-203ENST00000444983 C4BPBP20851 252 aa11.57□□□□□ -0.56
CCNE1-203ENST00000444983 PLP1P60201 277 aa11.57□□□□□ -0.56
CCNE1-203ENST00000444983 NSUN5P1Q3KNT7 163 aa11.57□□□□□ -0.56
CCNE1-203ENST00000444983 MIC13Q5XKP0 118 aa11.57□□□□□ -0.56
CCNE1-203ENST00000444983 TOMM20LQ6UXN7 152 aa11.57□□□□□ -0.56
CCNE1-203ENST00000444983 C12orf54Q6X4T0 127 aa11.57□□□□□ -0.56
CCNE1-203ENST00000444983 BAP18Q8IXM2 172 aa11.57□□□□□ -0.56
CCNE1-203ENST00000444983 C3orf56Q8N813 242 aa11.57□□□□□ -0.56
CCNE1-203ENST00000444983 BPIFCQ8NFQ6 507 aa11.57□□□□□ -0.56
CCNE1-203ENST00000444983 OR51G1Q8NGK1 321 aa11.57□□□□□ -0.56
CCNE1-203ENST00000444983 DUX3Q96PT4 197 aa11.57□□□□□ -0.56
CCNE1-203ENST00000444983 PUS1Q9Y606 427 aaKnown RBP eCLIP11.57□□□□□ -0.56
CCNE1-203ENST00000444983 FABP1P07148 127 aa11.56□□□□□ -0.56
CCNE1-203ENST00000444983 SPP1P10451 314 aa11.56□□□□□ -0.56
CCNE1-203ENST00000444983 ZP3P21754 424 aa11.56□□□□□ -0.56
CCNE1-203ENST00000444983 UNQ9165/PRO28630Q6UXU0 137 aa11.56□□□□□ -0.56
CCNE1-203ENST00000444983 STPG3Q8N7X2 389 aa11.56□□□□□ -0.56
CCNE1-203ENST00000444983 OR2G3Q8NGZ4 309 aa11.56□□□□□ -0.56
CCNE1-203ENST00000444983 Q8WTZ3 238 aa11.56□□□□□ -0.56
CCNE1-203ENST00000444983 GNPNAT1Q96EK6 184 aaPredicted RBP11.56□□□□□ -0.56
CCNE1-203ENST00000444983 RCC1LQ96I51 464 aaKnown RBP11.56□□□□□ -0.56
CCNE1-203ENST00000444983 SH3BGRL3Q9H299 93 aa11.56□□□□□ -0.56
CCNE1-203ENST00000444983 PXMP4Q9Y6I8 212 aa11.56□□□□□ -0.56
CCNE1-203ENST00000444983 WNK1Q9H4A3 2382 aa11.56□□□□□ -0.56
CCNE1-203ENST00000444983 C17orf112F2Z3M2 114 aa11.55□□□□□ -0.56
CCNE1-203ENST00000444983 LGALS9O00182 355 aa11.55□□□□□ -0.56
CCNE1-203ENST00000444983 YIF1AO95070 293 aa11.55□□□□□ -0.56
CCNE1-203ENST00000444983 CFDP00746 253 aaPredicted RBP11.55□□□□□ -0.56
CCNE1-203ENST00000444983 TPT1P13693 172 aaKnown RBP11.55□□□□□ -0.56
CCNE1-203ENST00000444983 RPEL1Q2QD12 228 aa11.55□□□□□ -0.56
CCNE1-203ENST00000444983 SHISA2Q6UWI4 295 aa11.55□□□□□ -0.56
CCNE1-203ENST00000444983 ST8SIA2Q92186 375 aa11.55□□□□□ -0.56
CCNE1-203ENST00000444983 SLC39A9Q9NUM3 307 aa11.55□□□□□ -0.56
CCNE1-203ENST00000444983 MYCNOSP40205 109 aa11.55□□□□□ -0.56
CCNE1-203ENST00000444983 SLURP1P55000 103 aa11.55□□□□□ -0.56
CCNE1-203ENST00000444983 B2MP61769 119 aa11.55□□□□□ -0.56
CCNE1-203ENST00000444983 EIF5AP63241 154 aaKnown RBP11.55□□□□□ -0.56
CCNE1-203ENST00000444983 SERF2P84101 59 aa11.55□□□□□ -0.56
CCNE1-203ENST00000444983 USF2Q15853 346 aaPredicted RBP11.55□□□□□ -0.56
CCNE1-203ENST00000444983 KRTAP21-3Q3LHN1 58 aa11.55□□□□□ -0.56
CCNE1-203ENST00000444983 REC114Q7Z4M0 266 aa11.55□□□□□ -0.56
CCNE1-203ENST00000444983 ZNF709Q8N972 641 aa11.55□□□□□ -0.56
CCNE1-203ENST00000444983 TMEM190Q8WZ59 177 aa11.55□□□□□ -0.56
CCNE1-203ENST00000444983 DPF1Q92782 380 aa11.55□□□□□ -0.56
CCNE1-203ENST00000444983 RNF125Q96EQ8 232 aa11.55□□□□□ -0.56
CCNE1-203ENST00000444983 A8MWP6 167 aa11.54□□□□□ -0.56
CCNE1-203ENST00000444983 IL4P05112 153 aa11.54□□□□□ -0.56
CCNE1-203ENST00000444983 SEC11BP0C7V7 166 aa11.54□□□□□ -0.56
CCNE1-203ENST00000444983 PATE2Q6UY27 113 aa11.54□□□□□ -0.56
CCNE1-203ENST00000444983 TMEM37Q8WXS4 190 aa11.54□□□□□ -0.56
CCNE1-203ENST00000444983 SLC25A32Q9H2D1 315 aa11.54□□□□□ -0.56
CCNE1-203ENST00000444983 KCNIP2Q9NS61 270 aa11.54□□□□□ -0.56
CCNE1-203ENST00000444983 PLA2G2EQ9NZK7 142 aa11.54□□□□□ -0.56
CCNE1-203ENST00000444983 MRPL27Q9P0M9 148 aaKnown RBP11.54□□□□□ -0.56
CCNE1-203ENST00000444983 TSPAN15O95858 294 aa11.53□□□□□ -0.56
CCNE1-203ENST00000444983 FAM106AQ4KMX7 169 aa11.53□□□□□ -0.56
CCNE1-203ENST00000444983 PXDC1Q5TGL8 231 aa11.53□□□□□ -0.56
CCNE1-203ENST00000444983 C1QL4Q86Z23 238 aa11.53□□□□□ -0.56
CCNE1-203ENST00000444983 DLX4Q92988 240 aaPredicted RBP11.53□□□□□ -0.56
CCNE1-203ENST00000444983 TRRAPQ9Y4A5 3859 aa11.53□□□□□ -0.56
CCNE1-203ENST00000444983 IGHV3OR16-8A0A075B7F1 116 aa11.52□□□□□ -0.56
CCNE1-203ENST00000444983 K7EMT4 169 aa11.52□□□□□ -0.56
CCNE1-203ENST00000444983 SYNJ2BPP57105 145 aa11.52□□□□□ -0.56
CCNE1-203ENST00000444983 GCSAMLQ5JQS6 135 aa11.52□□□□□ -0.56
CCNE1-203ENST00000444983 Q6ZRG5 221 aa11.52□□□□□ -0.56
CCNE1-203ENST00000444983 OR4F17Q8NGA8 305 aa11.52□□□□□ -0.56
CCNE1-203ENST00000444983 OR4F4Q96R69 305 aa11.52□□□□□ -0.56
CCNE1-203ENST00000444983 CRYBB3P26998 211 aa11.52□□□□□ -0.57
CCNE1-203ENST00000444983 FFAR4Q5NUL3 377 aa11.52□□□□□ -0.57
CCNE1-203ENST00000444983 PHYHIPLQ96FC7 376 aa11.52□□□□□ -0.57
CCNE1-203ENST00000444983 VSIRQ9H7M9 311 aa11.52□□□□□ -0.57
CCNE1-203ENST00000444983 U3KQE9 123 aa11.52□□□□□ -0.57
CCNE1-203ENST00000444983 TMEM213A2RRL7 107 aa11.51□□□□□ -0.57
CCNE1-203ENST00000444983 ORM2P19652 201 aa11.51□□□□□ -0.57
CCNE1-203ENST00000444983 ELLP55199 621 aaPredicted RBP11.51□□□□□ -0.57
CCNE1-203ENST00000444983 LYZP61626 148 aa11.51□□□□□ -0.57
CCNE1-203ENST00000444983 IL34Q6ZMJ4 242 aa11.51□□□□□ -0.57
CCNE1-203ENST00000444983 TMED6Q8WW62 240 aa11.51□□□□□ -0.57
CCNE1-203ENST00000444983 DNAJC4Q9NNZ3 241 aa11.51□□□□□ -0.57
CCNE1-203ENST00000444983 DAZ1Q9NQZ3 744 aaKnown RBP11.51□□□□□ -0.57
CCNE1-203ENST00000444983 ANK2Q01484 3957 aa11.5□□□□□ -0.57
CCNE1-203ENST00000444983 ELOA3CA0A087WX78 387 aaPredicted RBP11.5□□□□□ -0.57
CCNE1-203ENST00000444983 ZNF320A2RRD8 509 aa11.5□□□□□ -0.57
CCNE1-203ENST00000444983 HYPMO75409 117 aa11.5□□□□□ -0.57
CCNE1-203ENST00000444983 TM4SF20Q53R12 229 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms