RNA–Protein interactions for RNA: ENST00000444942.1

LINC00642-203, long intergenic non-protein coding RNA 642, humanhuman

TSL 1 (best)

Gene LINC00642, Length 1,376 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-203ENST00000444942 RBFOX3A6NFN3 312 aa7.18□□□□□ -1.26
LINC00642-203ENST00000444942 MPDU1O75352 247 aa7.18□□□□□ -1.26
LINC00642-203ENST00000444942 IFNA1P01562 189 aa7.18□□□□□ -1.26
LINC00642-203ENST00000444942 IFNA4P05014 189 aa7.18□□□□□ -1.26
LINC00642-203ENST00000444942 IGF1P05019 195 aa7.18□□□□□ -1.26
LINC00642-203ENST00000444942 SSBP2P81877 361 aaPredicted RBP7.18□□□□□ -1.26
LINC00642-203ENST00000444942 CFHR3Q02985 330 aa7.18□□□□□ -1.26
LINC00642-203ENST00000444942 FOXE3Q13461 319 aa7.18□□□□□ -1.26
LINC00642-203ENST00000444942 PRSS8Q16651 343 aa7.18□□□□□ -1.26
LINC00642-203ENST00000444942 GUCA2BQ16661 112 aa7.18□□□□□ -1.26
LINC00642-203ENST00000444942 MRGPRG-AS1Q2M3A8 158 aa7.18□□□□□ -1.26
LINC00642-203ENST00000444942 ATRAIDQ6UW56 229 aa7.18□□□□□ -1.26
LINC00642-203ENST00000444942 ZNF562Q6V9R5 426 aa7.18□□□□□ -1.26
LINC00642-203ENST00000444942 TMEM167AQ8TBQ9 72 aa7.18□□□□□ -1.26
LINC00642-203ENST00000444942 MBD3L1Q8WWY6 194 aa7.18□□□□□ -1.26
LINC00642-203ENST00000444942 NPCDR1Q9BY65 106 aa7.18□□□□□ -1.26
LINC00642-203ENST00000444942 ZNF430Q9H8G1 570 aaPredicted RBP7.18□□□□□ -1.26
LINC00642-203ENST00000444942 KCNIP2Q9NS61 270 aa7.18□□□□□ -1.26
LINC00642-203ENST00000444942 RPRMQ9NS64 109 aa7.18□□□□□ -1.26
LINC00642-203ENST00000444942 MAP1LC3B2A6NCE7 125 aa7.17□□□□□ -1.26
LINC00642-203ENST00000444942 ACTL6BO94805 426 aa7.17□□□□□ -1.26
LINC00642-203ENST00000444942 IGHV3-11P01762 117 aa7.17□□□□□ -1.26
LINC00642-203ENST00000444942 IGHG4P01861 327 aa7.17□□□□□ -1.26
LINC00642-203ENST00000444942 PPIFP30405 207 aaKnown RBP7.17□□□□□ -1.26
LINC00642-203ENST00000444942 ATP5IP56385 69 aaPredicted RBP7.17□□□□□ -1.26
LINC00642-203ENST00000444942 TPPP2P59282 170 aa7.17□□□□□ -1.26
LINC00642-203ENST00000444942 RPL8P62917 257 aaKnown RBP7.17□□□□□ -1.26
LINC00642-203ENST00000444942 ACOT6Q3I5F7 207 aaPredicted RBP7.17□□□□□ -1.26
LINC00642-203ENST00000444942 ZNF506Q5JVG8 444 aa7.17□□□□□ -1.26
LINC00642-203ENST00000444942 FFAR4Q5NUL3 377 aa7.17□□□□□ -1.26
LINC00642-203ENST00000444942 OR1L8Q8NGR8 309 aa7.17□□□□□ -1.26
LINC00642-203ENST00000444942 SRSF12Q8WXF0 261 aaKnown RBP7.17□□□□□ -1.26
LINC00642-203ENST00000444942 RCHY1Q96PM5 261 aa7.17□□□□□ -1.26
LINC00642-203ENST00000444942 SCRT1Q9BWW7 348 aa7.17□□□□□ -1.26
LINC00642-203ENST00000444942 COMMD5Q9GZQ3 224 aa7.17□□□□□ -1.26
LINC00642-203ENST00000444942 MAP1LC3BQ9GZQ8 125 aa7.17□□□□□ -1.26
LINC00642-203ENST00000444942 SLC35B3Q9H1N7 401 aa7.17□□□□□ -1.26
LINC00642-203ENST00000444942 VSIRQ9H7M9 311 aa7.17□□□□□ -1.26
LINC00642-203ENST00000444942 GNB4Q9HAV0 340 aa7.17□□□□□ -1.26
LINC00642-203ENST00000444942 LSM4Q9Y4Z0 139 aaKnown RBP7.17□□□□□ -1.26
LINC00642-203ENST00000444942 DNAH10Q8IVF4 4471 aa7.16□□□□□ -1.26
LINC00642-203ENST00000444942 CTXND1A0A1B0GTU2 59 aa7.16□□□□□ -1.26
LINC00642-203ENST00000444942 TEX50A0A1B0GTY4 177 aa7.16□□□□□ -1.26
LINC00642-203ENST00000444942 C9JQL5 133 aa7.16□□□□□ -1.26
LINC00642-203ENST00000444942 PRSS46E5RG02 174 aa7.16□□□□□ -1.26
LINC00642-203ENST00000444942 ELANEP08246 267 aa7.16□□□□□ -1.26
LINC00642-203ENST00000444942 PSMB8P28062 276 aa7.16□□□□□ -1.26
LINC00642-203ENST00000444942 RAB9AP51151 201 aa7.16□□□□□ -1.26
LINC00642-203ENST00000444942 CCL20P78556 96 aa7.16□□□□□ -1.26
LINC00642-203ENST00000444942 ZNF726P1Q15940 193 aa7.16□□□□□ -1.26
LINC00642-203ENST00000444942 HAGHQ16775 308 aa7.16□□□□□ -1.26
LINC00642-203ENST00000444942 KHDC3LQ587J8 217 aa7.16□□□□□ -1.26
LINC00642-203ENST00000444942 LCE2DQ5TA82 110 aaPredicted RBP7.16□□□□□ -1.26
LINC00642-203ENST00000444942 ASPHD1Q5U4P2 390 aa7.16□□□□□ -1.26
LINC00642-203ENST00000444942 ACSM6Q6P461 480 aa7.16□□□□□ -1.26
LINC00642-203ENST00000444942 FAM122CQ6P4D5 195 aa7.16□□□□□ -1.26
LINC00642-203ENST00000444942 LCN15Q6UWW0 184 aa7.16□□□□□ -1.26
LINC00642-203ENST00000444942 C19orf35Q6ZS72 473 aa7.16□□□□□ -1.26
LINC00642-203ENST00000444942 MMD2Q8IY49 270 aa7.16□□□□□ -1.26
LINC00642-203ENST00000444942 OR10G4Q8NGN3 311 aa7.16□□□□□ -1.26
LINC00642-203ENST00000444942 OR10G9Q8NGN4 311 aa7.16□□□□□ -1.26
LINC00642-203ENST00000444942 OR10G7Q8NGN6 311 aa7.16□□□□□ -1.26
LINC00642-203ENST00000444942 DPF1Q92782 380 aa7.16□□□□□ -1.26
LINC00642-203ENST00000444942 ACTR3CQ9C0K3 210 aaPredicted RBP7.16□□□□□ -1.26
LINC00642-203ENST00000444942 SLC39A9Q9NUM3 307 aa7.16□□□□□ -1.26
LINC00642-203ENST00000444942 LOC102723971A0A1B0GUV8 181 aa7.15□□□□□ -1.26
LINC00642-203ENST00000444942 E7EUB6 86 aa7.15□□□□□ -1.26
LINC00642-203ENST00000444942 FNDC10F2Z333 226 aa7.15□□□□□ -1.26
LINC00642-203ENST00000444942 CYB5BO43169 146 aa7.15□□□□□ -1.26
LINC00642-203ENST00000444942 IGLV1-40P01703 118 aa7.15□□□□□ -1.26
LINC00642-203ENST00000444942 TRGV3P03979 118 aa7.15□□□□□ -1.26
LINC00642-203ENST00000444942 HSPB1P04792 205 aaKnown RBP7.15□□□□□ -1.26
LINC00642-203ENST00000444942 REG1AP05451 166 aa7.15□□□□□ -1.26
LINC00642-203ENST00000444942 OPRK1P41145 380 aa7.15□□□□□ -1.26
LINC00642-203ENST00000444942 RPL27AP46776 148 aaKnown RBP7.15□□□□□ -1.26
LINC00642-203ENST00000444942 NPBWR1P48145 328 aa7.15□□□□□ -1.26
LINC00642-203ENST00000444942 ERHP84090 104 aaKnown RBP7.15□□□□□ -1.26
LINC00642-203ENST00000444942 ICAM4Q14773 271 aa7.15□□□□□ -1.26
LINC00642-203ENST00000444942 AKIRIN2Q53H80 203 aa7.15□□□□□ -1.26
LINC00642-203ENST00000444942 C2orf83Q53S99 150 aa7.15□□□□□ -1.26
LINC00642-203ENST00000444942 C19orf54Q5BKX5 351 aa7.15□□□□□ -1.26
LINC00642-203ENST00000444942 MRPL41Q8IXM3 137 aaKnown RBP7.15□□□□□ -1.26
LINC00642-203ENST00000444942 ZNF491Q8N8L2 437 aa7.15□□□□□ -1.26
LINC00642-203ENST00000444942 CLRN3Q8NCR9 226 aa7.15□□□□□ -1.26
LINC00642-203ENST00000444942 RXFP4Q8TDU9 374 aa7.15□□□□□ -1.26
LINC00642-203ENST00000444942 TMEM170AQ8WVE7 144 aa7.15□□□□□ -1.26
LINC00642-203ENST00000444942 RAX2Q96IS3 184 aa7.15□□□□□ -1.26
LINC00642-203ENST00000444942 RARRES2Q99969 163 aa7.15□□□□□ -1.26
LINC00642-203ENST00000444942 SLC25A22Q9H936 323 aa7.15□□□□□ -1.26
LINC00642-203ENST00000444942 NPVFQ9HCQ7 196 aa7.15□□□□□ -1.26
LINC00642-203ENST00000444942 GNG13Q9P2W3 67 aa7.15□□□□□ -1.26
LINC00642-203ENST00000444942 HERC1Q15751 4861 aa7.14□□□□□ -1.27
LINC00642-203ENST00000444942 ZFP92A6NM28 416 aa7.14□□□□□ -1.27
LINC00642-203ENST00000444942 INS-IGF2F8WCM5 200 aa7.14□□□□□ -1.27
LINC00642-203ENST00000444942 DNASE2O00115 360 aaPredicted RBP7.14□□□□□ -1.27
LINC00642-203ENST00000444942 CCL24O00175 119 aa7.14□□□□□ -1.27
LINC00642-203ENST00000444942 SRP19P09132 144 aaKnown RBP7.14□□□□□ -1.27
LINC00642-203ENST00000444942 OR13C7P0DN81 318 aa7.14□□□□□ -1.27
LINC00642-203ENST00000444942 BCL2P10415 239 aa7.14□□□□□ -1.27
LINC00642-203ENST00000444942 CDC34P49427 236 aaPredicted RBP7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms