RNA–Protein interactions for RNA: ENST00000444177.1

TREX1-202, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,200 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-202ENST00000444177 GBGT1Q8N5D6 347 aa10.42□□□□□ -0.74
TREX1-202ENST00000444177 IL17DQ8TAD2 202 aa10.42□□□□□ -0.74
TREX1-202ENST00000444177 NARS2Q96I59 477 aaKnown RBP10.42□□□□□ -0.74
TREX1-202ENST00000444177 SLC35E1Q96K37 410 aa10.42□□□□□ -0.74
TREX1-202ENST00000444177 SMIM8Q96KF7 97 aa10.42□□□□□ -0.74
TREX1-202ENST00000444177 RAB40CQ96S21 281 aa10.42□□□□□ -0.74
TREX1-202ENST00000444177 GGTLC1Q9BX51 225 aa10.42□□□□□ -0.74
TREX1-202ENST00000444177 VSIRQ9H7M9 311 aa10.42□□□□□ -0.74
TREX1-202ENST00000444177 DNAH1Q9P2D7 4330 aa10.42□□□□□ -0.74
TREX1-202ENST00000444177 LYSTQ99698 3801 aa10.41□□□□□ -0.74
TREX1-202ENST00000444177 LOC102724200A0A096LPH7 203 aaPredicted RBP10.41□□□□□ -0.74
TREX1-202ENST00000444177 FAM25EA8MYX2 175 aa10.41□□□□□ -0.74
TREX1-202ENST00000444177 SSNA1O43805 119 aa10.41□□□□□ -0.74
TREX1-202ENST00000444177 MBPP02686 304 aaPredicted RBP10.41□□□□□ -0.74
TREX1-202ENST00000444177 GPX4P36969 197 aaPredicted RBP10.41□□□□□ -0.74
TREX1-202ENST00000444177 POLR2GP62487 172 aaKnown RBP eCLIP10.41□□□□□ -0.74
TREX1-202ENST00000444177 RPL11P62913 178 aaKnown RBP10.41□□□□□ -0.74
TREX1-202ENST00000444177 CYCSP99999 105 aaKnown RBP10.41□□□□□ -0.74
TREX1-202ENST00000444177 FAM90A2PQ658T7 463 aa10.41□□□□□ -0.74
TREX1-202ENST00000444177 Q8WTZ3 238 aa10.41□□□□□ -0.74
TREX1-202ENST00000444177 NMES1Q9C002 83 aa10.41□□□□□ -0.74
TREX1-202ENST00000444177 GSKIPQ9P0R6 139 aa10.41□□□□□ -0.74
TREX1-202ENST00000444177 ALG5Q9Y673 324 aa10.41□□□□□ -0.74
TREX1-202ENST00000444177 A0A1W2PS18 150 aa10.4□□□□□ -0.74
TREX1-202ENST00000444177 H3BP45 60 aa10.4□□□□□ -0.74
TREX1-202ENST00000444177 TSC22D2O75157 780 aa10.4□□□□□ -0.74
TREX1-202ENST00000444177 IL4P05112 153 aa10.4□□□□□ -0.74
TREX1-202ENST00000444177 CD5P06127 495 aa10.4□□□□□ -0.74
TREX1-202ENST00000444177 YPEL3P61236 119 aaPredicted RBP10.4□□□□□ -0.74
TREX1-202ENST00000444177 PAFAH1B2P68402 229 aa10.4□□□□□ -0.74
TREX1-202ENST00000444177 WFDC3Q8IUB2 231 aa10.4□□□□□ -0.74
TREX1-202ENST00000444177 RCL1Q9Y2P8 373 aaKnown RBP10.4□□□□□ -0.74
TREX1-202ENST00000444177 STRAPQ9Y3F4 350 aaKnown RBP10.4□□□□□ -0.74
TREX1-202ENST00000444177 ZFP92A6NM28 416 aa10.39□□□□□ -0.75
TREX1-202ENST00000444177 DNASE2O00115 360 aaPredicted RBP10.39□□□□□ -0.75
TREX1-202ENST00000444177 GOSR2O14653 212 aa10.39□□□□□ -0.75
TREX1-202ENST00000444177 SSSCA1O60232 199 aa10.39□□□□□ -0.75
TREX1-202ENST00000444177 DFFBO76075 338 aa10.39□□□□□ -0.75
TREX1-202ENST00000444177 SCGB1D2O95969 90 aa10.39□□□□□ -0.75
TREX1-202ENST00000444177 TOMM40O96008 361 aa10.39□□□□□ -0.75
TREX1-202ENST00000444177 CRYBB3P26998 211 aa10.39□□□□□ -0.75
TREX1-202ENST00000444177 LILRB2Q8N423 598 aa10.39□□□□□ -0.75
TREX1-202ENST00000444177 GRAMD2BQ96HH9 432 aa10.39□□□□□ -0.75
TREX1-202ENST00000444177 PSENENQ9NZ42 101 aa10.39□□□□□ -0.75
TREX1-202ENST00000444177 K7EPK0 472 aa10.38□□□□□ -0.75
TREX1-202ENST00000444177 HNRNPCP07910 306 aaKnown RBP eCLIP10.38□□□□□ -0.75
TREX1-202ENST00000444177 RD3LP0DJH9 198 aa10.38□□□□□ -0.75
TREX1-202ENST00000444177 PVALBP20472 110 aaPredicted RBP10.38□□□□□ -0.75
TREX1-202ENST00000444177 P2RY1P47900 373 aa10.38□□□□□ -0.75
TREX1-202ENST00000444177 PAX9P55771 341 aa10.38□□□□□ -0.75
TREX1-202ENST00000444177 GAMTQ14353 236 aa10.38□□□□□ -0.75
TREX1-202ENST00000444177 USF2Q15853 346 aaPredicted RBP10.38□□□□□ -0.75
TREX1-202ENST00000444177 SPANXN5Q5MJ07 72 aa10.38□□□□□ -0.75
TREX1-202ENST00000444177 TMEM14EPQ6UXP3 125 aa10.38□□□□□ -0.75
TREX1-202ENST00000444177 APRG1Q8IVJ8 170 aa10.38□□□□□ -0.75
TREX1-202ENST00000444177 OVOL2Q9BRP0 275 aa10.38□□□□□ -0.75
TREX1-202ENST00000444177 MS4A6AQ9H2W1 248 aa10.38□□□□□ -0.75
TREX1-202ENST00000444177 MAP6D1Q9H9H5 199 aa10.38□□□□□ -0.75
TREX1-202ENST00000444177 RABAC1Q9UI14 185 aa10.38□□□□□ -0.75
TREX1-202ENST00000444177 PRSS46E5RG02 174 aa10.37□□□□□ -0.75
TREX1-202ENST00000444177 L7N2F9 121 aa10.37□□□□□ -0.75
TREX1-202ENST00000444177 PSG1P11464 419 aa10.37□□□□□ -0.75
TREX1-202ENST00000444177 RPL35AP18077 110 aaKnown RBP10.37□□□□□ -0.75
TREX1-202ENST00000444177 APOC4P55056 127 aa10.37□□□□□ -0.75
TREX1-202ENST00000444177 H2BFSP57053 126 aa10.37□□□□□ -0.75
TREX1-202ENST00000444177 VAMP2P63027 116 aa10.37□□□□□ -0.75
TREX1-202ENST00000444177 RAB32Q13637 225 aa10.37□□□□□ -0.75
TREX1-202ENST00000444177 ZNF124Q15973 351 aa10.37□□□□□ -0.75
TREX1-202ENST00000444177 STXBP6Q8NFX7 210 aa10.37□□□□□ -0.75
TREX1-202ENST00000444177 ASB13Q8WXK3 278 aa10.37□□□□□ -0.75
TREX1-202ENST00000444177 PBDC1Q9BVG4 233 aa10.37□□□□□ -0.75
TREX1-202ENST00000444177 C11orf1Q9H5F2 150 aa10.37□□□□□ -0.75
TREX1-202ENST00000444177 MGAT4CQ9UBM8 478 aa10.37□□□□□ -0.75
TREX1-202ENST00000444177 PLECQ15149 4684 aaKnown RBP10.37□□□□□ -0.75
TREX1-202ENST00000444177 TRAV2A0A0B4J234 112 aa10.36□□□□□ -0.75
TREX1-202ENST00000444177 FNDC10F2Z333 226 aa10.36□□□□□ -0.75
TREX1-202ENST00000444177 EIF2B2P49770 351 aaKnown RBP10.36□□□□□ -0.75
TREX1-202ENST00000444177 CMC4P56277 68 aaPredicted RBP10.36□□□□□ -0.75
TREX1-202ENST00000444177 ZNF90Q03938 601 aa10.36□□□□□ -0.75
TREX1-202ENST00000444177 OR51G1Q8NGK1 321 aa10.36□□□□□ -0.75
TREX1-202ENST00000444177 RNF125Q96EQ8 232 aa10.36□□□□□ -0.75
TREX1-202ENST00000444177 MED28Q9H204 178 aa10.36□□□□□ -0.75
TREX1-202ENST00000444177 LSM5Q9Y4Y9 91 aaKnown RBP10.36□□□□□ -0.75
TREX1-202ENST00000444177 IGKV1D-37A0A075B6S9 117 aa10.35□□□□□ -0.75
TREX1-202ENST00000444177 PMS2P5A8MQ11 134 aa10.35□□□□□ -0.75
TREX1-202ENST00000444177 DEDDO75618 318 aa10.35□□□□□ -0.75
TREX1-202ENST00000444177 SIX6O95475 246 aa10.35□□□□□ -0.75
TREX1-202ENST00000444177 RLN2P04090 185 aa10.35□□□□□ -0.75
TREX1-202ENST00000444177 FABP1P07148 127 aa10.35□□□□□ -0.75
TREX1-202ENST00000444177 PET100P0DJ07 73 aa10.35□□□□□ -0.75
TREX1-202ENST00000444177 S100A10P60903 97 aa10.35□□□□□ -0.75
TREX1-202ENST00000444177 LYZP61626 148 aa10.35□□□□□ -0.75
TREX1-202ENST00000444177 AKR1C1Q04828 323 aa10.35□□□□□ -0.75
TREX1-202ENST00000444177 C16orf54Q6UWD8 224 aa10.35□□□□□ -0.75
TREX1-202ENST00000444177 FAM24BQ8N5W8 94 aa10.35□□□□□ -0.75
TREX1-202ENST00000444177 EPPK1P58107 5090 aaKnown RBP10.35□□□□□ -0.75
TREX1-202ENST00000444177 HELTA6NFD8 242 aa10.34□□□□□ -0.75
TREX1-202ENST00000444177 JTBO76095 146 aa10.34□□□□□ -0.75
TREX1-202ENST00000444177 DEFB131AP59861 70 aa10.34□□□□□ -0.75
TREX1-202ENST00000444177 RRAS2P62070 204 aaPredicted RBP10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms