RNA–Protein interactions for RNA: ENST00000444058.1

ATPAF2-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 3

Gene ATPAF2, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-201ENST00000444058 PFDN2Q9UHV9 154 aa13.87□□□□□ -0.19
ATPAF2-201ENST00000444058 DYNC2H1Q8NCM8 4307 aaKnown RBP13.87□□□□□ -0.19
ATPAF2-201ENST00000444058 CSMD3Q7Z407 3707 aa13.86□□□□□ -0.19
ATPAF2-201ENST00000444058 ZFP92A6NM28 416 aa13.86□□□□□ -0.19
ATPAF2-201ENST00000444058 DEFB131AP59861 70 aa13.86□□□□□ -0.19
ATPAF2-201ENST00000444058 ID3Q02535 119 aa13.86□□□□□ -0.19
ATPAF2-201ENST00000444058 RNF125Q96EQ8 232 aa13.86□□□□□ -0.19
ATPAF2-201ENST00000444058 SEPSECSQ9HD40 501 aaKnown RBP13.86□□□□□ -0.19
ATPAF2-201ENST00000444058 FLVCR2Q9UPI3 526 aa13.86□□□□□ -0.19
ATPAF2-201ENST00000444058 IGKV1D-37A0A075B6S9 117 aa13.85□□□□□ -0.19
ATPAF2-201ENST00000444058 LINC00854A0A1B0GVQ3 168 aa13.85□□□□□ -0.19
ATPAF2-201ENST00000444058 IFNA21P01568 189 aa13.85□□□□□ -0.19
ATPAF2-201ENST00000444058 IAPPP10997 89 aa13.85□□□□□ -0.19
ATPAF2-201ENST00000444058 OR8G2PQ6IF36 304 aa13.85□□□□□ -0.19
ATPAF2-201ENST00000444058 FAM24BQ8N5W8 94 aa13.85□□□□□ -0.19
ATPAF2-201ENST00000444058 GATAD1Q8WUU5 269 aa13.85□□□□□ -0.19
ATPAF2-201ENST00000444058 STARD9Q9P2P6 4700 aa13.85□□□□□ -0.19
ATPAF2-201ENST00000444058 LCE6AA0A183 80 aa13.84□□□□□ -0.19
ATPAF2-201ENST00000444058 ADAP1O75689 374 aa13.84□□□□□ -0.19
ATPAF2-201ENST00000444058 C4orf46Q504U0 113 aa13.84□□□□□ -0.19
ATPAF2-201ENST00000444058 TRGV9Q99603 122 aa13.84□□□□□ -0.19
ATPAF2-201ENST00000444058 MAGT1Q9H0U3 335 aa13.84□□□□□ -0.19
ATPAF2-201ENST00000444058 SNRPGP15A8MWD9 76 aa13.83□□□□□ -0.2
ATPAF2-201ENST00000444058 PRSS46E5RG02 174 aa13.83□□□□□ -0.2
ATPAF2-201ENST00000444058 WRBO00258 174 aa13.83□□□□□ -0.2
ATPAF2-201ENST00000444058 PLA2G10O15496 165 aa13.83□□□□□ -0.2
ATPAF2-201ENST00000444058 CFDP00746 253 aaPredicted RBP13.83□□□□□ -0.2
ATPAF2-201ENST00000444058 ANXA7P20073 488 aaKnown RBP13.83□□□□□ -0.2
ATPAF2-201ENST00000444058 ZNF90Q03938 601 aa13.83□□□□□ -0.2
ATPAF2-201ENST00000444058 LEMD1Q68G75 181 aa13.83□□□□□ -0.2
ATPAF2-201ENST00000444058 THAP8Q8NA92 274 aa13.83□□□□□ -0.2
ATPAF2-201ENST00000444058 TENM2Q9NT68 2774 aa13.83□□□□□ -0.2
ATPAF2-201ENST00000444058 LYRM1O43325 122 aa13.82□□□□□ -0.2
ATPAF2-201ENST00000444058 NKX2-1P43699 371 aaPredicted RBP13.82□□□□□ -0.2
ATPAF2-201ENST00000444058 SIGLEC15Q6ZMC9 328 aa13.82□□□□□ -0.2
ATPAF2-201ENST00000444058 STHQ8IWL8 128 aa13.82□□□□□ -0.2
ATPAF2-201ENST00000444058 TMEM217Q8N7C4 229 aa13.82□□□□□ -0.2
ATPAF2-201ENST00000444058 OR4D5Q8NGN0 318 aa13.82□□□□□ -0.2
ATPAF2-201ENST00000444058 MITD1Q8WV92 249 aa13.82□□□□□ -0.2
ATPAF2-201ENST00000444058 CCDC32Q9BV29 185 aa13.82□□□□□ -0.2
ATPAF2-201ENST00000444058 NRN1Q9NPD7 142 aa13.82□□□□□ -0.2
ATPAF2-201ENST00000444058 PAIP2BQ9ULR5 123 aaKnown RBP13.82□□□□□ -0.2
ATPAF2-201ENST00000444058 STRAPQ9Y3F4 350 aaKnown RBP13.82□□□□□ -0.2
ATPAF2-201ENST00000444058 A0A0J9YWU9 116 aa13.81□□□□□ -0.2
ATPAF2-201ENST00000444058 ZNF688P0C7X2 276 aa13.81□□□□□ -0.2
ATPAF2-201ENST00000444058 TMEM41BQ5BJD5 291 aa13.81□□□□□ -0.2
ATPAF2-201ENST00000444058 SPANXN5Q5MJ07 72 aa13.81□□□□□ -0.2
ATPAF2-201ENST00000444058 C1orf194Q5T5A4 169 aa13.81□□□□□ -0.2
ATPAF2-201ENST00000444058 TRPT1Q86TN4 253 aaKnown RBP13.81□□□□□ -0.2
ATPAF2-201ENST00000444058 IGKV1OR2-108A0A075B7D4 117 aa13.8□□□□□ -0.2
ATPAF2-201ENST00000444058 SNRPD3P62318 126 aaKnown RBP13.8□□□□□ -0.2
ATPAF2-201ENST00000444058 POLR2GP62487 172 aaKnown RBP eCLIP13.8□□□□□ -0.2
ATPAF2-201ENST00000444058 MORN3Q6PF18 240 aaPredicted RBP13.8□□□□□ -0.2
ATPAF2-201ENST00000444058 SMIM8Q96KF7 97 aa13.8□□□□□ -0.2
ATPAF2-201ENST00000444058 PBDC1Q9BVG4 233 aa13.8□□□□□ -0.2
ATPAF2-201ENST00000444058 C20orf85Q9H1P6 137 aa13.8□□□□□ -0.2
ATPAF2-201ENST00000444058 FBXL17Q9UF56 701 aa13.8□□□□□ -0.2
ATPAF2-201ENST00000444058 SACSQ9NZJ4 4579 aa13.8□□□□□ -0.2
ATPAF2-201ENST00000444058 CA1P00915 261 aaPredicted RBP13.79□□□□□ -0.2
ATPAF2-201ENST00000444058 SPP1P10451 314 aa13.79□□□□□ -0.2
ATPAF2-201ENST00000444058 RARRES2Q99969 163 aa13.79□□□□□ -0.2
ATPAF2-201ENST00000444058 SLC45A2Q9UMX9 530 aa13.79□□□□□ -0.2
ATPAF2-201ENST00000444058 RYR2Q92736 4967 aa13.79□□□□□ -0.2
ATPAF2-201ENST00000444058 TCRBP04435 133 aa13.78□□□□□ -0.2
ATPAF2-201ENST00000444058 LYZP61626 148 aa13.78□□□□□ -0.2
ATPAF2-201ENST00000444058 RAB40CQ96S21 281 aa13.78□□□□□ -0.2
ATPAF2-201ENST00000444058 H3BP45 60 aa13.77□□□□□ -0.21
ATPAF2-201ENST00000444058 TAS2R30P59541 319 aa13.77□□□□□ -0.21
ATPAF2-201ENST00000444058 IAH1Q2TAA2 248 aaPredicted RBP13.77□□□□□ -0.21
ATPAF2-201ENST00000444058 PSMG4Q5JS54 123 aa13.77□□□□□ -0.21
ATPAF2-201ENST00000444058 TMEM144Q7Z5S9 345 aa13.77□□□□□ -0.21
ATPAF2-201ENST00000444058 OR11H2Q8NH07 326 aa13.77□□□□□ -0.21
ATPAF2-201ENST00000444058 PSENENQ9NZ42 101 aa13.77□□□□□ -0.21
ATPAF2-201ENST00000444058 SSSCA1O60232 199 aa13.76□□□□□ -0.21
ATPAF2-201ENST00000444058 JTBO76095 146 aa13.76□□□□□ -0.21
ATPAF2-201ENST00000444058 S100A7P31151 101 aa13.76□□□□□ -0.21
ATPAF2-201ENST00000444058 EWSR1Q01844 656 aaKnown RBP eCLIP13.76□□□□□ -0.21
ATPAF2-201ENST00000444058 AKR1C1Q04828 323 aa13.76□□□□□ -0.21
ATPAF2-201ENST00000444058 OR2F1Q13607 317 aa13.76□□□□□ -0.21
ATPAF2-201ENST00000444058 ACTL10Q5JWF8 245 aa13.76□□□□□ -0.21
ATPAF2-201ENST00000444058 ACOT7LQ6ZUV0 252 aa13.76□□□□□ -0.21
ATPAF2-201ENST00000444058 S100ZQ8WXG8 99 aa13.76□□□□□ -0.21
ATPAF2-201ENST00000444058 C11orf68Q9H3H3 251 aaKnown RBP13.76□□□□□ -0.21
ATPAF2-201ENST00000444058 NUPR2A6NF83 97 aa13.75□□□□□ -0.21
ATPAF2-201ENST00000444058 KNCNA6PVL3 124 aa13.75□□□□□ -0.21
ATPAF2-201ENST00000444058 PMS2P5A8MQ11 134 aa13.75□□□□□ -0.21
ATPAF2-201ENST00000444058 FNDC10F2Z333 226 aa13.75□□□□□ -0.21
ATPAF2-201ENST00000444058 TSC22D2O75157 780 aa13.75□□□□□ -0.21
ATPAF2-201ENST00000444058 GIG44P09565 113 aaPredicted RBP13.75□□□□□ -0.21
ATPAF2-201ENST00000444058 PAX9P55771 341 aa13.75□□□□□ -0.21
ATPAF2-201ENST00000444058 SAMD13Q5VXD3 122 aa13.75□□□□□ -0.21
ATPAF2-201ENST00000444058 TMEM14EPQ6UXP3 125 aa13.75□□□□□ -0.21
ATPAF2-201ENST00000444058 ZBTB8BQ8NAP8 495 aaPredicted RBP13.75□□□□□ -0.21
ATPAF2-201ENST00000444058 BPIFCQ8NFQ6 507 aa13.75□□□□□ -0.21
ATPAF2-201ENST00000444058 NUDT15Q9NV35 164 aa13.75□□□□□ -0.21
ATPAF2-201ENST00000444058 CXorf65A6NEN9 183 aa13.74□□□□□ -0.21
ATPAF2-201ENST00000444058 OR8I2Q8N0Y5 310 aa13.74□□□□□ -0.21
ATPAF2-201ENST00000444058 PPP1R14BQ96C90 147 aa13.74□□□□□ -0.21
ATPAF2-201ENST00000444058 TRAV6A0A075B6T7 132 aa13.73□□□□□ -0.21
ATPAF2-201ENST00000444058 ID1P41134 155 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms