RNA–Protein interactions for RNA: ENST00000443046.5

HMGN1-208, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-208ENST00000443046 SAMD12Q8N8I0 201 aa10.06□□□□□ -0.8
HMGN1-208ENST00000443046 OR4B1Q8NGF8 309 aa10.06□□□□□ -0.8
HMGN1-208ENST00000443046 LINC00052Q96N35 136 aa10.06□□□□□ -0.8
HMGN1-208ENST00000443046 RAB26Q9ULW5 256 aa10.06□□□□□ -0.8
HMGN1-208ENST00000443046 A0A0J9YX75 114 aa10.05□□□□□ -0.8
HMGN1-208ENST00000443046 C3orf85A0A1B0GTC6 90 aa10.05□□□□□ -0.8
HMGN1-208ENST00000443046 LYRM9A8MSI8 78 aa10.05□□□□□ -0.8
HMGN1-208ENST00000443046 ANKRD65E5RJM6 399 aa10.05□□□□□ -0.8
HMGN1-208ENST00000443046 PSG1P11464 419 aa10.05□□□□□ -0.8
HMGN1-208ENST00000443046 UCP1P25874 307 aa10.05□□□□□ -0.8
HMGN1-208ENST00000443046 ID1P41134 155 aa10.05□□□□□ -0.8
HMGN1-208ENST00000443046 FAM78BQ5VT40 261 aa10.05□□□□□ -0.8
HMGN1-208ENST00000443046 AMTNQ6UX39 209 aa10.05□□□□□ -0.8
HMGN1-208ENST00000443046 OR51G1Q8NGK1 321 aa10.05□□□□□ -0.8
HMGN1-208ENST00000443046 NPIPB3Q92617 1050 aa10.05□□□□□ -0.8
HMGN1-208ENST00000443046 C7orf50Q9BRJ6 194 aaKnown RBP10.05□□□□□ -0.8
HMGN1-208ENST00000443046 KRTAP1-5Q9BYS1 174 aa10.05□□□□□ -0.8
HMGN1-208ENST00000443046 EPM2AB3EWF7 344 aa10.04□□□□□ -0.8
HMGN1-208ENST00000443046 F6UB75 175 aa10.04□□□□□ -0.8
HMGN1-208ENST00000443046 RCVRNP35243 200 aa10.04□□□□□ -0.8
HMGN1-208ENST00000443046 TGFBR1P36897 503 aa10.04□□□□□ -0.8
HMGN1-208ENST00000443046 NUP62P37198 522 aaPredicted RBP10.04□□□□□ -0.8
HMGN1-208ENST00000443046 RPS19P39019 145 aaKnown RBP10.04□□□□□ -0.8
HMGN1-208ENST00000443046 CCL18P55774 89 aa10.04□□□□□ -0.8
HMGN1-208ENST00000443046 RNF125Q96EQ8 232 aa10.04□□□□□ -0.8
HMGN1-208ENST00000443046 VCX3BQ9H321 246 aa10.04□□□□□ -0.8
HMGN1-208ENST00000443046 PLAC8L1A1L4L8 177 aa10.03□□□□□ -0.8
HMGN1-208ENST00000443046 ISLRO14498 428 aa10.03□□□□□ -0.8
HMGN1-208ENST00000443046 PRM2P04554 102 aa10.03□□□□□ -0.8
HMGN1-208ENST00000443046 PGAM2P15259 253 aa10.03□□□□□ -0.8
HMGN1-208ENST00000443046 ELK1P19419 428 aa10.03□□□□□ -0.8
HMGN1-208ENST00000443046 SP6Q3SY56 376 aa10.03□□□□□ -0.8
HMGN1-208ENST00000443046 C1orf194Q5T5A4 169 aa10.03□□□□□ -0.8
HMGN1-208ENST00000443046 OR8G2PQ6IF36 304 aa10.03□□□□□ -0.8
HMGN1-208ENST00000443046 ETFRF1Q6IPR1 90 aa10.03□□□□□ -0.8
HMGN1-208ENST00000443046 FAM219AQ8IW50 185 aa10.03□□□□□ -0.8
HMGN1-208ENST00000443046 SLC24A4Q8NFF2 622 aa10.03□□□□□ -0.8
HMGN1-208ENST00000443046 GPR146Q96CH1 333 aa10.03□□□□□ -0.8
HMGN1-208ENST00000443046 RRNAD1Q96FB5 475 aaKnown RBP10.03□□□□□ -0.8
HMGN1-208ENST00000443046 IGF2BP2-AS1Q96M15 143 aa10.03□□□□□ -0.8
HMGN1-208ENST00000443046 MAGT1Q9H0U3 335 aa10.03□□□□□ -0.8
HMGN1-208ENST00000443046 HEYLQ9NQ87 328 aaPredicted RBP10.03□□□□□ -0.8
HMGN1-208ENST00000443046 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.03□□□□□ -0.8
HMGN1-208ENST00000443046 M0QYG6 137 aa10.02□□□□□ -0.81
HMGN1-208ENST00000443046 CDS2O95674 445 aa10.02□□□□□ -0.81
HMGN1-208ENST00000443046 NUDT3O95989 172 aa10.02□□□□□ -0.81
HMGN1-208ENST00000443046 INAFM2P0DMQ5 153 aa10.02□□□□□ -0.81
HMGN1-208ENST00000443046 TSPOP30536 169 aa10.02□□□□□ -0.81
HMGN1-208ENST00000443046 TRIM16LQ309B1 348 aa10.02□□□□□ -0.81
HMGN1-208ENST00000443046 EBLN2Q6P2I7 272 aa10.02□□□□□ -0.81
HMGN1-208ENST00000443046 Q9H8V8 135 aa10.02□□□□□ -0.81
HMGN1-208ENST00000443046 F5H768 121 aa10.01□□□□□ -0.81
HMGN1-208ENST00000443046 CRXO43186 299 aaPredicted RBP10.01□□□□□ -0.81
HMGN1-208ENST00000443046 B3GALNT1O75752 331 aa10.01□□□□□ -0.81
HMGN1-208ENST00000443046 SUPT4H1P63272 117 aaKnown RBP10.01□□□□□ -0.81
HMGN1-208ENST00000443046 NMSQ5H8A3 153 aa10.01□□□□□ -0.81
HMGN1-208ENST00000443046 SSX7Q7RTT5 188 aa10.01□□□□□ -0.81
HMGN1-208ENST00000443046 COQ8AQ8NI60 647 aa10.01□□□□□ -0.81
HMGN1-208ENST00000443046 RNF141Q8WVD5 230 aa10.01□□□□□ -0.81
HMGN1-208ENST00000443046 ACY3Q96HD9 319 aa10.01□□□□□ -0.81
HMGN1-208ENST00000443046 C20orf173Q96LM9 149 aa10.01□□□□□ -0.81
HMGN1-208ENST00000443046 C17orf77Q96MU5 243 aa10.01□□□□□ -0.81
HMGN1-208ENST00000443046 Q9H3A6 140 aa10.01□□□□□ -0.81
HMGN1-208ENST00000443046 DOK5Q9P104 306 aa10.01□□□□□ -0.81
HMGN1-208ENST00000443046 FLG2Q5D862 2391 aaPredicted RBP10.01□□□□□ -0.81
HMGN1-208ENST00000443046 IGKV1D-37A0A075B6S9 117 aa10□□□□□ -0.81
HMGN1-208ENST00000443046 CBY3A6NI87 242 aa10□□□□□ -0.81
HMGN1-208ENST00000443046 ZNF705GA8MUZ8 300 aaPredicted RBP10□□□□□ -0.81
HMGN1-208ENST00000443046 DEFB130BP0DP73 79 aa10□□□□□ -0.81
HMGN1-208ENST00000443046 DEFB130AP0DP74 79 aa10□□□□□ -0.81
HMGN1-208ENST00000443046 ARRDC1Q8N5I2 433 aa10□□□□□ -0.81
HMGN1-208ENST00000443046 LHFPL5Q8TAF8 219 aa10□□□□□ -0.81
HMGN1-208ENST00000443046 ABHD1Q96SE0 405 aa10□□□□□ -0.81
HMGN1-208ENST00000443046 TMEM208Q9BTX3 173 aa10□□□□□ -0.81
HMGN1-208ENST00000443046 TMEM222Q9H0R3 208 aa10□□□□□ -0.81
HMGN1-208ENST00000443046 RPRMQ9NS64 109 aa10□□□□□ -0.81
HMGN1-208ENST00000443046 PFDN2Q9UHV9 154 aa10□□□□□ -0.81
HMGN1-208ENST00000443046 APOA1P02647 267 aa9.99□□□□□ -0.81
HMGN1-208ENST00000443046 ATP5G1P05496 136 aa9.99□□□□□ -0.81
HMGN1-208ENST00000443046 ATP5G3P48201 142 aa9.99□□□□□ -0.81
HMGN1-208ENST00000443046 XGP55808 180 aa9.99□□□□□ -0.81
HMGN1-208ENST00000443046 ZNF90Q03938 601 aa9.99□□□□□ -0.81
HMGN1-208ENST00000443046 FCN2Q15485 313 aa9.99□□□□□ -0.81
HMGN1-208ENST00000443046 TTC32Q5I0X7 151 aa9.99□□□□□ -0.81
HMGN1-208ENST00000443046 SNX29P2Q8IUI4 249 aa9.99□□□□□ -0.81
HMGN1-208ENST00000443046 LYPD1Q8N2G4 141 aa9.99□□□□□ -0.81
HMGN1-208ENST00000443046 GLYATL2Q8WU03 294 aa9.99□□□□□ -0.81
HMGN1-208ENST00000443046 PBDC1Q9BVG4 233 aa9.99□□□□□ -0.81
HMGN1-208ENST00000443046 COPZ2Q9P299 210 aa9.99□□□□□ -0.81
HMGN1-208ENST00000443046 A0A1W2PPQ1 181 aa9.98□□□□□ -0.81
HMGN1-208ENST00000443046 AZU1P20160 251 aa9.98□□□□□ -0.81
HMGN1-208ENST00000443046 B2MP61769 119 aa9.98□□□□□ -0.81
HMGN1-208ENST00000443046 KLF9Q13886 244 aaPredicted RBP9.98□□□□□ -0.81
HMGN1-208ENST00000443046 SAMD13Q5VXD3 122 aa9.98□□□□□ -0.81
HMGN1-208ENST00000443046 NOXA1Q86UR1 476 aa9.98□□□□□ -0.81
HMGN1-208ENST00000443046 CCDC71LQ8N9Z2 235 aa9.98□□□□□ -0.81
HMGN1-208ENST00000443046 OR11H7Q8NGC8 314 aa9.98□□□□□ -0.81
HMGN1-208ENST00000443046 TERB2Q8NHR7 220 aa9.98□□□□□ -0.81
HMGN1-208ENST00000443046 RNASE11Q8TAA1 199 aaKnown RBP9.98□□□□□ -0.81
HMGN1-208ENST00000443046 ZFAND1Q8TCF1 268 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms