RNA–Protein interactions for RNA: ENST00000441222.7

USP46-201, Transcript of ubiquitin specific peptidase 46, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP46, Length 7,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-201ENST00000441222 PRCDQ00LT1 54 aa5.58□□□□□ -1.52
USP46-201ENST00000441222 MINOS1Q5TGZ0 78 aa5.58□□□□□ -1.52
USP46-201ENST00000441222 DLX4Q92988 240 aaPredicted RBP5.58□□□□□ -1.52
USP46-201ENST00000441222 MINOS1-NBL1R4GNA1 71 aa5.58□□□□□ -1.52
USP46-201ENST00000441222 BRWD3Q6RI45 1802 aa5.58□□□□□ -1.52
USP46-201ENST00000441222 RNASE7Q9H1E1 156 aaKnown RBP5.57□□□□□ -1.52
USP46-201ENST00000441222 MED13LQ71F56 2210 aa5.57□□□□□ -1.52
USP46-201ENST00000441222 LDLRAD4O15165 306 aa5.57□□□□□ -1.52
USP46-201ENST00000441222 SNAI2O43623 268 aa5.57□□□□□ -1.52
USP46-201ENST00000441222 FAM219BQ5XKK7 198 aa5.57□□□□□ -1.52
USP46-201ENST00000441222 TEX43Q6ZNM6 134 aa5.57□□□□□ -1.52
USP46-201ENST00000441222 NR2C2APQ86WQ0 139 aa5.57□□□□□ -1.52
USP46-201ENST00000441222 C18orf12Q96KH6 178 aa5.57□□□□□ -1.52
USP46-201ENST00000441222 CHAC1Q9BUX1 264 aa5.57□□□□□ -1.52
USP46-201ENST00000441222 FBLN5Q9UBX5 448 aa5.57□□□□□ -1.52
USP46-201ENST00000441222 FNDC1Q4ZHG4 1894 aaPredicted RBP5.57□□□□□ -1.52
USP46-201ENST00000441222 A0A1W2PRS3 328 aa5.57□□□□□ -1.52
USP46-201ENST00000441222 TMEM8BA6NDV4 472 aa5.57□□□□□ -1.52
USP46-201ENST00000441222 GZMBP10144 247 aa5.57□□□□□ -1.52
USP46-201ENST00000441222 SSBP2P81877 361 aaPredicted RBP5.57□□□□□ -1.52
USP46-201ENST00000441222 RNF5Q99942 180 aa5.57□□□□□ -1.52
USP46-201ENST00000441222 ADMP35318 185 aa5.57□□□□□ -1.52
USP46-201ENST00000441222 HIST1H4AP62805 103 aaKnown RBP5.57□□□□□ -1.52
USP46-201ENST00000441222 MUC21Q5SSG8 566 aa5.57□□□□□ -1.52
USP46-201ENST00000441222 TGIF1Q15583 401 aa5.57□□□□□ -1.52
USP46-201ENST00000441222 RTBDNQ9BSG5 229 aaPredicted RBP5.57□□□□□ -1.52
USP46-201ENST00000441222 SAA2-SAA4A0A096LPE2 208 aa5.57□□□□□ -1.52
USP46-201ENST00000441222 SAA2P0DJI9 122 aaPredicted RBP5.57□□□□□ -1.52
USP46-201ENST00000441222 CEACAM8P31997 349 aaPredicted RBP5.57□□□□□ -1.52
USP46-201ENST00000441222 ST6GALNAC6Q969X2 333 aa5.57□□□□□ -1.52
USP46-201ENST00000441222 USMG5Q96IX5 58 aa5.57□□□□□ -1.52
USP46-201ENST00000441222 RLFQ13129 1914 aa5.57□□□□□ -1.52
USP46-201ENST00000441222 H3BMM0 161 aa5.57□□□□□ -1.52
USP46-201ENST00000441222 IGHV1-2P23083 117 aa5.57□□□□□ -1.52
USP46-201ENST00000441222 FAM27E3Q08E93 113 aa5.57□□□□□ -1.52
USP46-201ENST00000441222 ERCC8Q13216 396 aa5.57□□□□□ -1.52
USP46-201ENST00000441222 LYPD1Q8N2G4 141 aa5.57□□□□□ -1.52
USP46-201ENST00000441222 RBMY1FQ15415 496 aaKnown RBP5.56□□□□□ -1.52
USP46-201ENST00000441222 EFNB3Q15768 340 aa5.56□□□□□ -1.52
USP46-201ENST00000441222 SORL1Q92673 2214 aa5.56□□□□□ -1.52
USP46-201ENST00000441222 A0A1W2PRX2 142 aa5.56□□□□□ -1.52
USP46-201ENST00000441222 CCL1P22362 96 aa5.56□□□□□ -1.52
USP46-201ENST00000441222 SS18Q15532 418 aa5.56□□□□□ -1.52
USP46-201ENST00000441222 EDA2RQ9HAV5 297 aa5.56□□□□□ -1.52
USP46-201ENST00000441222 C6orf226Q5I0X4 101 aa5.56□□□□□ -1.52
USP46-201ENST00000441222 RCHY1Q96PM5 261 aa5.56□□□□□ -1.52
USP46-201ENST00000441222 ANAPC10Q9UM13 185 aa5.56□□□□□ -1.52
USP46-201ENST00000441222 TMEM131Q92545 1883 aa5.56□□□□□ -1.52
USP46-201ENST00000441222 MYMXA0A1B0GTQ4 84 aa5.56□□□□□ -1.52
USP46-201ENST00000441222 GLMPQ8WWB7 406 aa5.56□□□□□ -1.52
USP46-201ENST00000441222 HCFC1P51610 2035 aa5.56□□□□□ -1.52
USP46-201ENST00000441222 PLXNB3Q9ULL4 1909 aa5.56□□□□□ -1.52
USP46-201ENST00000441222 FOXL1Q12952 345 aa5.56□□□□□ -1.52
USP46-201ENST00000441222 ZXDCQ2QGD7 858 aaPredicted RBP5.56□□□□□ -1.52
USP46-201ENST00000441222 RPRMLQ8N4K4 120 aa5.56□□□□□ -1.52
USP46-201ENST00000441222 SRSF8Q9BRL6 282 aaKnown RBP5.56□□□□□ -1.52
USP46-201ENST00000441222 IL18BPO95998 194 aa5.56□□□□□ -1.52
USP46-201ENST00000441222 THBDP07204 575 aa5.56□□□□□ -1.52
USP46-201ENST00000441222 C2orf82Q6UX34 121 aa5.56□□□□□ -1.52
USP46-201ENST00000441222 MRPL52Q86TS9 123 aaKnown RBP5.56□□□□□ -1.52
USP46-201ENST00000441222 TRGV9Q99603 122 aa5.56□□□□□ -1.52
USP46-201ENST00000441222 COLQQ9Y215 455 aaPredicted RBP5.56□□□□□ -1.52
USP46-201ENST00000441222 ZNF138P52744 262 aa5.55□□□□□ -1.52
USP46-201ENST00000441222 C20orf204Q6ZNR8 217 aa5.55□□□□□ -1.52
USP46-201ENST00000441222 FAM216BQ8N7L0 139 aa5.55□□□□□ -1.52
USP46-201ENST00000441222 SIGLEC12Q96PQ1 595 aa5.55□□□□□ -1.52
USP46-201ENST00000441222 E9PLN8 166 aa5.55□□□□□ -1.52
USP46-201ENST00000441222 C1QTNF9P0C862 333 aa5.55□□□□□ -1.52
USP46-201ENST00000441222 TMEM155Q4W5P6 130 aa5.55□□□□□ -1.52
USP46-201ENST00000441222 MUC21A0A0G2JKD1 596 aa5.55□□□□□ -1.52
USP46-201ENST00000441222 MUC21A0A140T8X8 626 aa5.55□□□□□ -1.52
USP46-201ENST00000441222 INS-IGF2F8WCM5 200 aa5.55□□□□□ -1.52
USP46-201ENST00000441222 INSP01308 110 aa5.55□□□□□ -1.52
USP46-201ENST00000441222 IGHV3-11P01762 117 aa5.55□□□□□ -1.52
USP46-201ENST00000441222 C1QL2Q7Z5L3 287 aa5.55□□□□□ -1.52
USP46-201ENST00000441222 SLC25A39Q9BZJ4 359 aaPredicted RBP5.55□□□□□ -1.52
USP46-201ENST00000441222 MBNL3Q9NUK0 354 aaKnown RBP5.55□□□□□ -1.52
USP46-201ENST00000441222 S4R3C0 116 aa5.55□□□□□ -1.52
USP46-201ENST00000441222 TNFSF13O75888 250 aa5.55□□□□□ -1.52
USP46-201ENST00000441222 AMBPP02760 352 aa5.55□□□□□ -1.52
USP46-201ENST00000441222 IGFBP3P17936 291 aaPredicted RBP5.55□□□□□ -1.52
USP46-201ENST00000441222 TNFRSF6BO95407 300 aa5.55□□□□□ -1.52
USP46-201ENST00000441222 EVI2AP22794 236 aa5.55□□□□□ -1.52
USP46-201ENST00000441222 MPZP25189 248 aa5.55□□□□□ -1.52
USP46-201ENST00000441222 C9orf139Q6ZV77 190 aa5.55□□□□□ -1.52
USP46-201ENST00000441222 C1QL4Q86Z23 238 aa5.55□□□□□ -1.52
USP46-201ENST00000441222 F8VVB4 439 aa5.55□□□□□ -1.52
USP46-201ENST00000441222 F8VWA3 439 aa5.55□□□□□ -1.52
USP46-201ENST00000441222 UBE2CO00762 179 aa5.55□□□□□ -1.52
USP46-201ENST00000441222 DUTP33316 252 aaKnown RBP5.55□□□□□ -1.52
USP46-201ENST00000441222 C19orf48Q6RUI8 117 aa5.55□□□□□ -1.52
USP46-201ENST00000441222 ST6GALNAC3Q8NDV1 305 aa5.55□□□□□ -1.52
USP46-201ENST00000441222 SPANXCQ9NY87 97 aa5.55□□□□□ -1.52
USP46-201ENST00000441222 INAFM2P0DMQ5 153 aa5.54□□□□□ -1.52
USP46-201ENST00000441222 TRBV24-1A0A075B6N3 115 aa5.54□□□□□ -1.52
USP46-201ENST00000441222 TRAV8-1A0A0A6YYK1 113 aa5.54□□□□□ -1.52
USP46-201ENST00000441222 TRAV1-1A0A0B4J248 108 aa5.54□□□□□ -1.52
USP46-201ENST00000441222 TIMP3P35625 211 aa5.54□□□□□ -1.52
USP46-201ENST00000441222 MRPL14Q6P1L8 145 aaKnown RBP5.54□□□□□ -1.52
USP46-201ENST00000441222 FNDC10F2Z333 226 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms