RNA–Protein interactions for RNA: ENST00000440552.5

PTPRN-205, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 4

Gene PTPRN, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-205ENST00000440552 LOC102723971A0A1B0GUV8 181 aa10.02□□□□□ -0.81
PTPRN-205ENST00000440552 IGKV3-20P01619 116 aa10.02□□□□□ -0.81
PTPRN-205ENST00000440552 HBE1P02100 147 aa10.02□□□□□ -0.81
PTPRN-205ENST00000440552 PSG1P11464 419 aa10.02□□□□□ -0.81
PTPRN-205ENST00000440552 HTN3P15516 51 aa10.02□□□□□ -0.81
PTPRN-205ENST00000440552 ELK1P19419 428 aa10.02□□□□□ -0.81
PTPRN-205ENST00000440552 ALDH3B2P48448 385 aa10.02□□□□□ -0.81
PTPRN-205ENST00000440552 PAX9P55771 341 aa10.02□□□□□ -0.81
PTPRN-205ENST00000440552 FXYD7P58549 80 aa10.02□□□□□ -0.81
PTPRN-205ENST00000440552 TNP2Q05952 138 aa10.02□□□□□ -0.81
PTPRN-205ENST00000440552 ZNF79Q15937 498 aa10.02□□□□□ -0.81
PTPRN-205ENST00000440552 C1orf158Q8N1D5 194 aa10.02□□□□□ -0.81
PTPRN-205ENST00000440552 TERB2Q8NHR7 220 aa10.02□□□□□ -0.81
PTPRN-205ENST00000440552 RNF125Q96EQ8 232 aa10.02□□□□□ -0.81
PTPRN-205ENST00000440552 TMEM222Q9H0R3 208 aa10.02□□□□□ -0.81
PTPRN-205ENST00000440552 KLK11Q9UBX7 282 aa10.02□□□□□ -0.81
PTPRN-205ENST00000440552 TMED3Q9Y3Q3 217 aa10.02□□□□□ -0.81
PTPRN-205ENST00000440552 YTHDF2Q9Y5A9 579 aaKnown RBP10.02□□□□□ -0.81
PTPRN-205ENST00000440552 APOBP04114 4563 aaKnown RBP10.02□□□□□ -0.81
PTPRN-205ENST00000440552 DNAH5Q8TE73 4624 aa10.01□□□□□ -0.81
PTPRN-205ENST00000440552 SOCS3O14543 225 aa10.01□□□□□ -0.81
PTPRN-205ENST00000440552 CD3DP04234 171 aa10.01□□□□□ -0.81
PTPRN-205ENST00000440552 DEFB1P60022 68 aa10.01□□□□□ -0.81
PTPRN-205ENST00000440552 LSM3P62310 102 aaKnown RBP10.01□□□□□ -0.81
PTPRN-205ENST00000440552 PSG9Q00887 426 aa10.01□□□□□ -0.81
PTPRN-205ENST00000440552 C1orf194Q5T5A4 169 aa10.01□□□□□ -0.81
PTPRN-205ENST00000440552 OR51G1Q8NGK1 321 aa10.01□□□□□ -0.81
PTPRN-205ENST00000440552 OR13C8Q8NGS7 320 aa10.01□□□□□ -0.81
PTPRN-205ENST00000440552 RBPMSQ93062 196 aaKnown RBP10.01□□□□□ -0.81
PTPRN-205ENST00000440552 ACY3Q96HD9 319 aa10.01□□□□□ -0.81
PTPRN-205ENST00000440552 LINC00052Q96N35 136 aa10.01□□□□□ -0.81
PTPRN-205ENST00000440552 WDR12Q9GZL7 423 aaKnown RBP10.01□□□□□ -0.81
PTPRN-205ENST00000440552 CACNG5Q9UF02 275 aa10.01□□□□□ -0.81
PTPRN-205ENST00000440552 CEBPZOSA8MTT3 80 aa10□□□□□ -0.81
PTPRN-205ENST00000440552 ISLRO14498 428 aa10□□□□□ -0.81
PTPRN-205ENST00000440552 RORCP51449 518 aa10□□□□□ -0.81
PTPRN-205ENST00000440552 DAD1P61803 113 aa10□□□□□ -0.81
PTPRN-205ENST00000440552 RRN3P1Q2M238 152 aa10□□□□□ -0.81
PTPRN-205ENST00000440552 NMSQ5H8A3 153 aa10□□□□□ -0.81
PTPRN-205ENST00000440552 SAMD13Q5VXD3 122 aa10□□□□□ -0.81
PTPRN-205ENST00000440552 MAPKAPK5-AS1Q8N8E1 139 aa10□□□□□ -0.81
PTPRN-205ENST00000440552 OR4B1Q8NGF8 309 aa10□□□□□ -0.81
PTPRN-205ENST00000440552 LHFPL5Q8TAF8 219 aa10□□□□□ -0.81
PTPRN-205ENST00000440552 GLYATL2Q8WU03 294 aa10□□□□□ -0.81
PTPRN-205ENST00000440552 GPR146Q96CH1 333 aa10□□□□□ -0.81
PTPRN-205ENST00000440552 SLC35B3Q9H1N7 401 aa10□□□□□ -0.81
PTPRN-205ENST00000440552 MTFP1Q9UDX5 166 aa10□□□□□ -0.81
PTPRN-205ENST00000440552 TEX13DA0A0J9YY54 714 aaPredicted RBP9.99□□□□□ -0.81
PTPRN-205ENST00000440552 NBDYA0A0U1RRE5 68 aa9.99□□□□□ -0.81
PTPRN-205ENST00000440552 A8MTW9 85 aa9.99□□□□□ -0.81
PTPRN-205ENST00000440552 HPGDSO60760 199 aa9.99□□□□□ -0.81
PTPRN-205ENST00000440552 ATP6V1G2O95670 118 aa9.99□□□□□ -0.81
PTPRN-205ENST00000440552 OR5AC1P0C628 307 aa9.99□□□□□ -0.81
PTPRN-205ENST00000440552 SUPT4H1P63272 117 aaKnown RBP9.99□□□□□ -0.81
PTPRN-205ENST00000440552 EBLN2Q6P2I7 272 aa9.99□□□□□ -0.81
PTPRN-205ENST00000440552 GSG1LQ6UXU4 331 aa9.99□□□□□ -0.81
PTPRN-205ENST00000440552 SELENOHQ8IZQ5 122 aaKnown RBP9.99□□□□□ -0.81
PTPRN-205ENST00000440552 C6orf223Q8N319 242 aa9.99□□□□□ -0.81
PTPRN-205ENST00000440552 OR52I2Q8NH67 350 aa9.99□□□□□ -0.81
PTPRN-205ENST00000440552 COQ8AQ8NI60 647 aa9.99□□□□□ -0.81
PTPRN-205ENST00000440552 C7orf50Q9BRJ6 194 aaKnown RBP9.99□□□□□ -0.81
PTPRN-205ENST00000440552 A0A0J9YX75 114 aa9.98□□□□□ -0.81
PTPRN-205ENST00000440552 KLF9Q13886 244 aaPredicted RBP9.98□□□□□ -0.81
PTPRN-205ENST00000440552 FAM78BQ5VT40 261 aa9.98□□□□□ -0.81
PTPRN-205ENST00000440552 Q8N1X5 172 aa9.98□□□□□ -0.81
PTPRN-205ENST00000440552 TMEM229BQ8NBD8 167 aa9.98□□□□□ -0.81
PTPRN-205ENST00000440552 OR4D10Q8NGI6 311 aa9.98□□□□□ -0.81
PTPRN-205ENST00000440552 ZNRF2Q8NHG8 242 aa9.98□□□□□ -0.81
PTPRN-205ENST00000440552 MARCH1Q8TCQ1 289 aa9.98□□□□□ -0.81
PTPRN-205ENST00000440552 IGF2BP2-AS1Q96M15 143 aa9.98□□□□□ -0.81
PTPRN-205ENST00000440552 ATG101Q9BSB4 218 aa9.98□□□□□ -0.81
PTPRN-205ENST00000440552 MAGT1Q9H0U3 335 aa9.98□□□□□ -0.81
PTPRN-205ENST00000440552 NAA60Q9H7X0 242 aa9.98□□□□□ -0.81
PTPRN-205ENST00000440552 U3KQ87 197 aa9.98□□□□□ -0.81
PTPRN-205ENST00000440552 LYRM9A8MSI8 78 aa9.97□□□□□ -0.81
PTPRN-205ENST00000440552 TNFAIP8O95379 198 aa9.97□□□□□ -0.81
PTPRN-205ENST00000440552 GPX4P36969 197 aaPredicted RBP9.97□□□□□ -0.81
PTPRN-205ENST00000440552 ATP5IP56385 69 aaPredicted RBP9.97□□□□□ -0.81
PTPRN-205ENST00000440552 TAS2R19P59542 299 aa9.97□□□□□ -0.81
PTPRN-205ENST00000440552 SURF2Q15527 256 aaPredicted RBP9.97□□□□□ -0.81
PTPRN-205ENST00000440552 SCGB2B2Q4G0G5 96 aa9.97□□□□□ -0.81
PTPRN-205ENST00000440552 C15orf40Q8WUR7 153 aa9.97□□□□□ -0.81
PTPRN-205ENST00000440552 RTBDNQ9BSG5 229 aaPredicted RBP9.97□□□□□ -0.81
PTPRN-205ENST00000440552 PBDC1Q9BVG4 233 aa9.97□□□□□ -0.81
PTPRN-205ENST00000440552 VCX3AQ9NNX9 186 aa9.97□□□□□ -0.81
PTPRN-205ENST00000440552 C14orf166Q9Y224 244 aaKnown RBP9.97□□□□□ -0.81
PTPRN-205ENST00000440552 TMEM56-RWDD3S4R434 201 aa9.97□□□□□ -0.81
PTPRN-205ENST00000440552 IGKV1D-37A0A075B6S9 117 aa9.96□□□□□ -0.82
PTPRN-205ENST00000440552 F6UB75 175 aa9.96□□□□□ -0.82
PTPRN-205ENST00000440552 RAB3DO95716 219 aa9.96□□□□□ -0.82
PTPRN-205ENST00000440552 FABP1P07148 127 aa9.96□□□□□ -0.82
PTPRN-205ENST00000440552 SULT1A3P0DMM9 295 aa9.96□□□□□ -0.82
PTPRN-205ENST00000440552 SULT1A4P0DMN0 295 aa9.96□□□□□ -0.82
PTPRN-205ENST00000440552 MEOX2P50222 304 aa9.96□□□□□ -0.82
PTPRN-205ENST00000440552 NCS1P62166 190 aa9.96□□□□□ -0.82
PTPRN-205ENST00000440552 MEF2DQ14814 521 aa9.96□□□□□ -0.82
PTPRN-205ENST00000440552 RNASE12Q5GAN4 147 aaKnown RBP9.96□□□□□ -0.82
PTPRN-205ENST00000440552 TMEM268Q5VZI3 342 aa9.96□□□□□ -0.82
PTPRN-205ENST00000440552 MZT2AQ6P582 158 aa9.96□□□□□ -0.82
PTPRN-205ENST00000440552 AMTNQ6UX39 209 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms