RNA–Protein interactions for RNA: ENST00000440097.5

LIMD1-202, Transcript of LIM domains containing 1, humanhuman

TSL 5 BASIC

Gene LIMD1, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-202ENST00000440097 MGST2Q99735 147 aa11.4□□□□□ -0.58
LIMD1-202ENST00000440097 V9GYV3 84 aa11.4□□□□□ -0.58
LIMD1-202ENST00000440097 NBPF19A0A087WUL8 3843 aa11.4□□□□□ -0.58
LIMD1-202ENST00000440097 TRBV9A0A0B4J1U6 114 aa11.4□□□□□ -0.58
LIMD1-202ENST00000440097 A0A1W2PPR1 153 aa11.4□□□□□ -0.58
LIMD1-202ENST00000440097 MPDU1O75352 247 aa11.4□□□□□ -0.58
LIMD1-202ENST00000440097 LIPFP07098 398 aa11.4□□□□□ -0.58
LIMD1-202ENST00000440097 MC5RP33032 325 aa11.4□□□□□ -0.58
LIMD1-202ENST00000440097 FAM71F2Q6NXP2 309 aa11.4□□□□□ -0.58
LIMD1-202ENST00000440097 EAF1Q96JC9 268 aaPredicted RBP11.4□□□□□ -0.58
LIMD1-202ENST00000440097 UHRF2Q96PU4 802 aa11.4□□□□□ -0.58
LIMD1-202ENST00000440097 WNK2Q9Y3S1 2297 aa11.4□□□□□ -0.58
LIMD1-202ENST00000440097 NDUFS7O75251 213 aa11.39□□□□□ -0.59
LIMD1-202ENST00000440097 C3orf79P0CE67 100 aa11.39□□□□□ -0.59
LIMD1-202ENST00000440097 HINT1P49773 126 aaPredicted RBP11.39□□□□□ -0.59
LIMD1-202ENST00000440097 SLC35B1P78383 322 aa11.39□□□□□ -0.59
LIMD1-202ENST00000440097 RAB31Q13636 194 aa11.39□□□□□ -0.59
LIMD1-202ENST00000440097 VMA21Q3ZAQ7 101 aa11.39□□□□□ -0.59
LIMD1-202ENST00000440097 C10orf55Q5SWW7 151 aa11.39□□□□□ -0.59
LIMD1-202ENST00000440097 SPATA31B1PQ5VZV4 182 aa11.39□□□□□ -0.59
LIMD1-202ENST00000440097 C11orf71Q6IPW1 123 aa11.39□□□□□ -0.59
LIMD1-202ENST00000440097 TEPPQ6URK8 271 aa11.39□□□□□ -0.59
LIMD1-202ENST00000440097 UNQ5815/PRO19632Q6UWF5 114 aa11.39□□□□□ -0.59
LIMD1-202ENST00000440097 ATOH7Q8N100 152 aa11.39□□□□□ -0.59
LIMD1-202ENST00000440097 PNKDQ8N490 385 aa11.39□□□□□ -0.59
LIMD1-202ENST00000440097 OR1L8Q8NGR8 309 aa11.39□□□□□ -0.59
LIMD1-202ENST00000440097 RPEQ96AT9 228 aa11.39□□□□□ -0.59
LIMD1-202ENST00000440097 GGTLC1Q9BX51 225 aa11.39□□□□□ -0.59
LIMD1-202ENST00000440097 PLXNB1O43157 2135 aa11.39□□□□□ -0.59
LIMD1-202ENST00000440097 ACTL6BO94805 426 aa11.39□□□□□ -0.59
LIMD1-202ENST00000440097 GCHFRP30047 84 aa11.39□□□□□ -0.59
LIMD1-202ENST00000440097 ERHP84090 104 aaKnown RBP11.39□□□□□ -0.59
LIMD1-202ENST00000440097 C22orf46C9J442 243 aa11.39□□□□□ -0.59
LIMD1-202ENST00000440097 PRSS46E5RG02 174 aa11.39□□□□□ -0.59
LIMD1-202ENST00000440097 COTL1Q14019 142 aa11.39□□□□□ -0.59
LIMD1-202ENST00000440097 MAJINQ3KP22 176 aa11.39□□□□□ -0.59
LIMD1-202ENST00000440097 OR10J3Q5JRS4 329 aa11.39□□□□□ -0.59
LIMD1-202ENST00000440097 SAPCD1Q5SSQ6 148 aa11.39□□□□□ -0.59
LIMD1-202ENST00000440097 ZNF596Q8TC21 504 aa11.39□□□□□ -0.59
LIMD1-202ENST00000440097 RITA1Q96K30 269 aa11.39□□□□□ -0.59
LIMD1-202ENST00000440097 C9JCJ5 164 aa11.38□□□□□ -0.59
LIMD1-202ENST00000440097 BUB1B-PAK6H3BSN5 160 aa11.38□□□□□ -0.59
LIMD1-202ENST00000440097 TMEM136Q6ZRR5 245 aa11.38□□□□□ -0.59
LIMD1-202ENST00000440097 NIT1Q86X76 327 aa11.38□□□□□ -0.59
LIMD1-202ENST00000440097 FAM19A2Q8N3H0 131 aa11.38□□□□□ -0.59
LIMD1-202ENST00000440097 SVIPQ8NHG7 77 aa11.38□□□□□ -0.59
LIMD1-202ENST00000440097 SSBP3Q9BWW4 388 aaPredicted RBP11.38□□□□□ -0.59
LIMD1-202ENST00000440097 ZNF430Q9H8G1 570 aaPredicted RBP11.38□□□□□ -0.59
LIMD1-202ENST00000440097 TPSG1Q9NRR2 321 aa11.38□□□□□ -0.59
LIMD1-202ENST00000440097 PTPN13Q12923 2485 aa11.38□□□□□ -0.59
LIMD1-202ENST00000440097 FASNP49327 2511 aaKnown RBP11.38□□□□□ -0.59
LIMD1-202ENST00000440097 A0A1W2PRD5 423 aa11.38□□□□□ -0.59
LIMD1-202ENST00000440097 A0A1W2PRF3 423 aa11.38□□□□□ -0.59
LIMD1-202ENST00000440097 A0A1W2PRM7 423 aa11.38□□□□□ -0.59
LIMD1-202ENST00000440097 E7EUB6 86 aa11.38□□□□□ -0.59
LIMD1-202ENST00000440097 C19orf84I3L1E1 186 aa11.38□□□□□ -0.59
LIMD1-202ENST00000440097 ZNF324O75467 553 aaPredicted RBP11.38□□□□□ -0.59
LIMD1-202ENST00000440097 FOXH1O75593 365 aa11.38□□□□□ -0.59
LIMD1-202ENST00000440097 APELAP0DMC3 54 aa11.38□□□□□ -0.59
LIMD1-202ENST00000440097 ZNF137PP52743 207 aa11.38□□□□□ -0.59
LIMD1-202ENST00000440097 UBE2V1Q13404 147 aa11.38□□□□□ -0.59
LIMD1-202ENST00000440097 TNFRSF14Q92956 283 aa11.38□□□□□ -0.59
LIMD1-202ENST00000440097 SRIP30626 198 aa11.37□□□□□ -0.59
LIMD1-202ENST00000440097 GPR6P46095 362 aaPredicted RBP11.37□□□□□ -0.59
LIMD1-202ENST00000440097 TCL1AP56279 114 aa11.37□□□□□ -0.59
LIMD1-202ENST00000440097 C11orf52Q96A22 123 aa11.37□□□□□ -0.59
LIMD1-202ENST00000440097 SEPSECSQ9HD40 501 aaKnown RBP11.37□□□□□ -0.59
LIMD1-202ENST00000440097 NAV3Q8IVL0 2385 aa11.37□□□□□ -0.59
LIMD1-202ENST00000440097 ZFHX3Q15911 3703 aa11.37□□□□□ -0.59
LIMD1-202ENST00000440097 LOC105371242A0A075B767 164 aa11.37□□□□□ -0.59
LIMD1-202ENST00000440097 FSTL3O95633 263 aa11.37□□□□□ -0.59
LIMD1-202ENST00000440097 IGLV1-47P01700 117 aa11.37□□□□□ -0.59
LIMD1-202ENST00000440097 MT-ND6P03923 174 aa11.37□□□□□ -0.59
LIMD1-202ENST00000440097 IGFBP2P18065 325 aa11.37□□□□□ -0.59
LIMD1-202ENST00000440097 TSPOP30536 169 aa11.37□□□□□ -0.59
LIMD1-202ENST00000440097 FXYD3Q14802 87 aa11.37□□□□□ -0.59
LIMD1-202ENST00000440097 WDR73Q6P4I2 378 aa11.37□□□□□ -0.59
LIMD1-202ENST00000440097 TMEM167AQ8TBQ9 72 aa11.37□□□□□ -0.59
LIMD1-202ENST00000440097 BBC3Q96PG8 261 aaPredicted RBP11.37□□□□□ -0.59
LIMD1-202ENST00000440097 RNASE7Q9H1E1 156 aaKnown RBP11.37□□□□□ -0.59
LIMD1-202ENST00000440097 NDUFA4L2Q9NRX3 87 aa11.37□□□□□ -0.59
LIMD1-202ENST00000440097 COX11Q9Y6N1 276 aa11.37□□□□□ -0.59
LIMD1-202ENST00000440097 IGHV1-3A0A0C4DH29 117 aa11.36□□□□□ -0.59
LIMD1-202ENST00000440097 TOMM40O96008 361 aa11.36□□□□□ -0.59
LIMD1-202ENST00000440097 REG1AP05451 166 aa11.36□□□□□ -0.59
LIMD1-202ENST00000440097 NTF3P20783 257 aa11.36□□□□□ -0.59
LIMD1-202ENST00000440097 CX3CL1P78423 397 aa11.36□□□□□ -0.59
LIMD1-202ENST00000440097 MLANAQ16655 118 aa11.36□□□□□ -0.59
LIMD1-202ENST00000440097 CENPWQ5EE01 88 aa11.36□□□□□ -0.59
LIMD1-202ENST00000440097 DTX2Q86UW9 622 aa11.36□□□□□ -0.59
LIMD1-202ENST00000440097 KLHDC1Q8N7A1 406 aa11.36□□□□□ -0.59
LIMD1-202ENST00000440097 C1orf159Q96HA4 380 aa11.36□□□□□ -0.59
LIMD1-202ENST00000440097 AMMECR1Q9Y4X0 333 aaPredicted RBP11.36□□□□□ -0.59
LIMD1-202ENST00000440097 LY96Q9Y6Y9 160 aa11.36□□□□□ -0.59
LIMD1-202ENST00000440097 BMPR1BO00238 502 aa11.36□□□□□ -0.59
LIMD1-202ENST00000440097 CNTFRP26992 372 aa11.36□□□□□ -0.59
LIMD1-202ENST00000440097 LGALS7P47929 136 aa11.36□□□□□ -0.59
LIMD1-202ENST00000440097 PLGLAQ15195 96 aa11.36□□□□□ -0.59
LIMD1-202ENST00000440097 TNXAQ16473 311 aa11.36□□□□□ -0.59
LIMD1-202ENST00000440097 LCN12Q6JVE5 192 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms