RNA–Protein interactions for RNA: ENST00000440083.6

TNFRSF1A-204, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,034 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-204ENST00000440083 STAG3L2P0CL84 134 aa11.41□□□□□ -0.58
TNFRSF1A-204ENST00000440083 STAG3L3P0CL85 134 aa11.41□□□□□ -0.58
TNFRSF1A-204ENST00000440083 TAS2R45P59539 299 aa11.41□□□□□ -0.58
TNFRSF1A-204ENST00000440083 KRTAP10-3P60369 221 aa11.41□□□□□ -0.58
TNFRSF1A-204ENST00000440083 HIST2H2BDQ6DRA6 164 aa11.41□□□□□ -0.58
TNFRSF1A-204ENST00000440083 PFDN5Q99471 154 aa11.41□□□□□ -0.58
TNFRSF1A-204ENST00000440083 TRGV9Q99603 122 aa11.41□□□□□ -0.58
TNFRSF1A-204ENST00000440083 MRPL32Q9BYC8 188 aaKnown RBP11.41□□□□□ -0.58
TNFRSF1A-204ENST00000440083 C16orf95Q9H693 158 aa11.41□□□□□ -0.58
TNFRSF1A-204ENST00000440083 FUT9Q9Y231 359 aa11.41□□□□□ -0.58
TNFRSF1A-204ENST00000440083 RNF114Q9Y508 228 aa11.41□□□□□ -0.58
TNFRSF1A-204ENST00000440083 IGHV3-21A0A0B4J1V1 117 aa11.4□□□□□ -0.58
TNFRSF1A-204ENST00000440083 IGHV7-81A0A0B4J1V7 117 aa11.4□□□□□ -0.58
TNFRSF1A-204ENST00000440083 HAX1O00165 279 aa11.4□□□□□ -0.58
TNFRSF1A-204ENST00000440083 FABP1P07148 127 aa11.4□□□□□ -0.58
TNFRSF1A-204ENST00000440083 ARL14EPLP0DKL9 152 aa11.4□□□□□ -0.58
TNFRSF1A-204ENST00000440083 PROK1P58294 105 aa11.4□□□□□ -0.58
TNFRSF1A-204ENST00000440083 NDPQ00604 133 aa11.4□□□□□ -0.58
TNFRSF1A-204ENST00000440083 C9orf152Q5JTZ5 239 aa11.4□□□□□ -0.58
TNFRSF1A-204ENST00000440083 FAM78BQ5VT40 261 aa11.4□□□□□ -0.58
TNFRSF1A-204ENST00000440083 C16orf82Q7Z2V1 217 aa11.4□□□□□ -0.58
TNFRSF1A-204ENST00000440083 C3orf56Q8N813 242 aa11.4□□□□□ -0.58
TNFRSF1A-204ENST00000440083 C5orf56Q8N8D9 126 aa11.4□□□□□ -0.58
TNFRSF1A-204ENST00000440083 CYB561D1Q8N8Q1 229 aa11.4□□□□□ -0.58
TNFRSF1A-204ENST00000440083 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.4□□□□□ -0.58
TNFRSF1A-204ENST00000440083 WFDC12Q8WWY7 111 aa11.4□□□□□ -0.58
TNFRSF1A-204ENST00000440083 TMPRSS5Q9H3S3 457 aa11.4□□□□□ -0.58
TNFRSF1A-204ENST00000440083 TECRQ9NZ01 308 aaKnown RBP11.4□□□□□ -0.58
TNFRSF1A-204ENST00000440083 M0R036 132 aa11.39□□□□□ -0.59
TNFRSF1A-204ENST00000440083 SCGB2A1O75556 95 aa11.39□□□□□ -0.59
TNFRSF1A-204ENST00000440083 OR5G3P0C626 314 aa11.39□□□□□ -0.59
TNFRSF1A-204ENST00000440083 GATA2P23769 480 aaPredicted RBP11.39□□□□□ -0.59
TNFRSF1A-204ENST00000440083 MEF2BQ02080 365 aaPredicted RBP11.39□□□□□ -0.59
TNFRSF1A-204ENST00000440083 ATRAIDQ6UW56 229 aa11.39□□□□□ -0.59
TNFRSF1A-204ENST00000440083 Q8N2B8 174 aa11.39□□□□□ -0.59
TNFRSF1A-204ENST00000440083 TTC9CQ8N5M4 171 aa11.39□□□□□ -0.59
TNFRSF1A-204ENST00000440083 TMEM116Q8NCL8 245 aa11.39□□□□□ -0.59
TNFRSF1A-204ENST00000440083 CLRN3Q8NCR9 226 aa11.39□□□□□ -0.59
TNFRSF1A-204ENST00000440083 GATAD1Q8WUU5 269 aa11.39□□□□□ -0.59
TNFRSF1A-204ENST00000440083 PRSS22Q9GZN4 317 aa11.39□□□□□ -0.59
TNFRSF1A-204ENST00000440083 SERTAD4Q9NUC0 356 aa11.39□□□□□ -0.59
TNFRSF1A-204ENST00000440083 THYN1Q9P016 225 aa11.39□□□□□ -0.59
TNFRSF1A-204ENST00000440083 MRPL36Q9P0J6 103 aaKnown RBP11.39□□□□□ -0.59
TNFRSF1A-204ENST00000440083 IGKV1D-37A0A075B6S9 117 aa11.38□□□□□ -0.59
TNFRSF1A-204ENST00000440083 I3L2K1 104 aa11.38□□□□□ -0.59
TNFRSF1A-204ENST00000440083 PAGE4O60829 102 aa11.38□□□□□ -0.59
TNFRSF1A-204ENST00000440083 GCHFRP30047 84 aa11.38□□□□□ -0.59
TNFRSF1A-204ENST00000440083 BTN1A1Q13410 526 aa11.38□□□□□ -0.59
TNFRSF1A-204ENST00000440083 AKIRIN2Q53H80 203 aa11.38□□□□□ -0.59
TNFRSF1A-204ENST00000440083 C10orf113Q5VZT2 155 aa11.38□□□□□ -0.59
TNFRSF1A-204ENST00000440083 SPATA31B1PQ5VZV4 182 aa11.38□□□□□ -0.59
TNFRSF1A-204ENST00000440083 MIR17HGQ75NE6 70 aa11.38□□□□□ -0.59
TNFRSF1A-204ENST00000440083 KLHDC1Q8N7A1 406 aa11.38□□□□□ -0.59
TNFRSF1A-204ENST00000440083 OR4X1Q8NH49 305 aa11.38□□□□□ -0.59
TNFRSF1A-204ENST00000440083 DOK5Q9P104 306 aa11.38□□□□□ -0.59
TNFRSF1A-204ENST00000440083 A0A1B0GUS0 222 aa11.37□□□□□ -0.59
TNFRSF1A-204ENST00000440083 NDUFS6O75380 124 aaKnown RBP11.37□□□□□ -0.59
TNFRSF1A-204ENST00000440083 HIST1H1BP16401 226 aaKnown RBP11.37□□□□□ -0.59
TNFRSF1A-204ENST00000440083 NPBWR1P48145 328 aa11.37□□□□□ -0.59
TNFRSF1A-204ENST00000440083 UBE2G2P60604 165 aa11.37□□□□□ -0.59
TNFRSF1A-204ENST00000440083 ZNF90Q03938 601 aa11.37□□□□□ -0.59
TNFRSF1A-204ENST00000440083 ECSCRQ19T08 205 aa11.37□□□□□ -0.59
TNFRSF1A-204ENST00000440083 ASPHD1Q5U4P2 390 aa11.37□□□□□ -0.59
TNFRSF1A-204ENST00000440083 UNQ5815/PRO19632Q6UWF5 114 aa11.37□□□□□ -0.59
TNFRSF1A-204ENST00000440083 PQLC2Q6ZP29 291 aa11.37□□□□□ -0.59
TNFRSF1A-204ENST00000440083 SGMS2Q8NHU3 365 aa11.37□□□□□ -0.59
TNFRSF1A-204ENST00000440083 FAM110DQ8TAY7 271 aaPredicted RBP11.37□□□□□ -0.59
TNFRSF1A-204ENST00000440083 OR4F4Q96R69 305 aa11.37□□□□□ -0.59
TNFRSF1A-204ENST00000440083 HSPB9Q9BQS6 159 aa11.37□□□□□ -0.59
TNFRSF1A-204ENST00000440083 NIPSNAP3BQ9BS92 247 aa11.37□□□□□ -0.59
TNFRSF1A-204ENST00000440083 ZNF747Q9BV97 191 aa11.37□□□□□ -0.59
TNFRSF1A-204ENST00000440083 SEPSECSQ9HD40 501 aaKnown RBP11.37□□□□□ -0.59
TNFRSF1A-204ENST00000440083 DNAJC4Q9NNZ3 241 aa11.37□□□□□ -0.59
TNFRSF1A-204ENST00000440083 TMEM167BQ9NRX6 74 aa11.37□□□□□ -0.59
TNFRSF1A-204ENST00000440083 DMRT1Q9Y5R6 373 aa11.37□□□□□ -0.59
TNFRSF1A-204ENST00000440083 PUS1Q9Y606 427 aaKnown RBP eCLIP11.37□□□□□ -0.59
TNFRSF1A-204ENST00000440083 IGLV11-55A0A075B6I3 123 aa11.36□□□□□ -0.59
TNFRSF1A-204ENST00000440083 ELOA3CA0A087WX78 387 aaPredicted RBP11.36□□□□□ -0.59
TNFRSF1A-204ENST00000440083 LINC01548A6NM66 108 aa11.36□□□□□ -0.59
TNFRSF1A-204ENST00000440083 C11orf94C9JXX5 98 aa11.36□□□□□ -0.59
TNFRSF1A-204ENST00000440083 K7EIM0 57 aa11.36□□□□□ -0.59
TNFRSF1A-204ENST00000440083 M0QZK8 103 aa11.36□□□□□ -0.59
TNFRSF1A-204ENST00000440083 ATP6V0E1O15342 81 aa11.36□□□□□ -0.59
TNFRSF1A-204ENST00000440083 OR7C2O60412 319 aa11.36□□□□□ -0.59
TNFRSF1A-204ENST00000440083 C8orf88P0DMB2 117 aa11.36□□□□□ -0.59
TNFRSF1A-204ENST00000440083 CST9LP1Q5W188 147 aa11.36□□□□□ -0.59
TNFRSF1A-204ENST00000440083 C11orf44Q8N8P7 122 aa11.36□□□□□ -0.59
TNFRSF1A-204ENST00000440083 OR5T1Q8NG75 326 aa11.36□□□□□ -0.59
TNFRSF1A-204ENST00000440083 SUN5Q8TC36 379 aa11.36□□□□□ -0.59
TNFRSF1A-204ENST00000440083 TMEM68Q96MH6 324 aa11.36□□□□□ -0.59
TNFRSF1A-204ENST00000440083 TXNDC17Q9BRA2 123 aa11.36□□□□□ -0.59
TNFRSF1A-204ENST00000440083 TRAV30A0A087WSZ9 112 aa11.35□□□□□ -0.59
TNFRSF1A-204ENST00000440083 F6UZH7 168 aa11.35□□□□□ -0.59
TNFRSF1A-204ENST00000440083 TMEM250H0YL14 139 aa11.35□□□□□ -0.59
TNFRSF1A-204ENST00000440083 CLN5O75503 358 aa11.35□□□□□ -0.59
TNFRSF1A-204ENST00000440083 MFAP4P55083 255 aa11.35□□□□□ -0.59
TNFRSF1A-204ENST00000440083 RHEBQ15382 184 aa11.35□□□□□ -0.59
TNFRSF1A-204ENST00000440083 OR1B1Q8NGR6 318 aa11.35□□□□□ -0.59
TNFRSF1A-204ENST00000440083 LINC00527Q9UJ94 153 aa11.35□□□□□ -0.59
TNFRSF1A-204ENST00000440083 H3BQ15 152 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms