RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 GPR82Q96P67 336 aa7.37□□□□□ -1.23
COPB1-202ENST00000439561 TMUB1Q9BVT8 246 aa7.37□□□□□ -1.23
COPB1-202ENST00000439561 C19orf24Q9BVV8 132 aa7.37□□□□□ -1.23
COPB1-202ENST00000439561 SLC25A2Q9BXI2 301 aa7.37□□□□□ -1.23
COPB1-202ENST00000439561 AP5S1Q9NUS5 200 aa7.37□□□□□ -1.23
COPB1-202ENST00000439561 RNF7Q9UBF6 113 aa7.37□□□□□ -1.23
COPB1-202ENST00000439561 PEF1Q9UBV8 284 aaKnown RBP7.37□□□□□ -1.23
COPB1-202ENST00000439561 DYSFO75923 2080 aa7.36□□□□□ -1.23
COPB1-202ENST00000439561 IGHV1-24A0A0C4DH33 117 aa7.36□□□□□ -1.23
COPB1-202ENST00000439561 IGLV2-8P01709 118 aa7.36□□□□□ -1.23
COPB1-202ENST00000439561 RNASE2P10153 161 aaKnown RBP7.36□□□□□ -1.23
COPB1-202ENST00000439561 LOXL3P58215 753 aa7.36□□□□□ -1.23
COPB1-202ENST00000439561 LRRC10Q5BKY1 277 aa7.36□□□□□ -1.23
COPB1-202ENST00000439561 ZNF329Q86UD4 541 aa7.36□□□□□ -1.23
COPB1-202ENST00000439561 CIARTQ8N365 385 aaPredicted RBP7.36□□□□□ -1.23
COPB1-202ENST00000439561 MED13LQ71F56 2210 aa7.36□□□□□ -1.23
COPB1-202ENST00000439561 PTPRZ1P23471 2315 aaPredicted RBP7.36□□□□□ -1.23
COPB1-202ENST00000439561 NBASA2RRP1 2371 aa7.36□□□□□ -1.23
COPB1-202ENST00000439561 FAM87AP0C7U9 286 aa7.36□□□□□ -1.23
COPB1-202ENST00000439561 GTF2H5Q6ZYL4 71 aa7.36□□□□□ -1.23
COPB1-202ENST00000439561 CCL17Q92583 94 aa7.36□□□□□ -1.23
COPB1-202ENST00000439561 TANC2Q9HCD6 1990 aa7.36□□□□□ -1.23
COPB1-202ENST00000439561 IGHV1-18A0A0C4DH31 117 aa7.36□□□□□ -1.23
COPB1-202ENST00000439561 CT45A10P0DMU9 189 aa7.36□□□□□ -1.23
COPB1-202ENST00000439561 BVES-AS1Q5T3Y7 98 aa7.36□□□□□ -1.23
COPB1-202ENST00000439561 SPATA12Q7Z6I5 190 aa7.36□□□□□ -1.23
COPB1-202ENST00000439561 TEX45Q8NA69 505 aa7.36□□□□□ -1.23
COPB1-202ENST00000439561 FAM222BQ8WU58 562 aa7.36□□□□□ -1.23
COPB1-202ENST00000439561 SARAFQ96BY9 339 aa7.36□□□□□ -1.23
COPB1-202ENST00000439561 WISP2O76076 250 aa7.35□□□□□ -1.23
COPB1-202ENST00000439561 FCER1GP30273 86 aa7.35□□□□□ -1.23
COPB1-202ENST00000439561 IGF2BP2-AS1Q96M15 143 aa7.35□□□□□ -1.23
COPB1-202ENST00000439561 THYN1Q9P016 225 aa7.35□□□□□ -1.23
COPB1-202ENST00000439561 H0YJW9 148 aa7.35□□□□□ -1.23
COPB1-202ENST00000439561 CNIH1O95406 144 aa7.35□□□□□ -1.23
COPB1-202ENST00000439561 VMA21Q3ZAQ7 101 aa7.35□□□□□ -1.23
COPB1-202ENST00000439561 RBPMS2Q6ZRY4 209 aaKnown RBP7.35□□□□□ -1.23
COPB1-202ENST00000439561 EXOC3-AS1Q8N2X6 119 aa7.35□□□□□ -1.23
COPB1-202ENST00000439561 Q9H3A6 140 aa7.35□□□□□ -1.23
COPB1-202ENST00000439561 SPTBN1Q01082 2364 aaKnown RBP7.35□□□□□ -1.23
COPB1-202ENST00000439561 CEP192Q8TEP8 1941 aa7.35□□□□□ -1.23
COPB1-202ENST00000439561 C2orf70A6NJV1 201 aa7.34□□□□□ -1.23
COPB1-202ENST00000439561 C21orf140B9A014 251 aa7.34□□□□□ -1.23
COPB1-202ENST00000439561 C2orf83Q53S99 150 aa7.34□□□□□ -1.23
COPB1-202ENST00000439561 FAM90A1Q86YD7 464 aa7.34□□□□□ -1.23
COPB1-202ENST00000439561 ZNF257Q9Y2Q1 563 aa7.34□□□□□ -1.23
COPB1-202ENST00000439561 TNRC6AQ8NDV7 1962 aaKnown RBP7.34□□□□□ -1.23
COPB1-202ENST00000439561 TAX1BP3O14907 124 aa7.34□□□□□ -1.23
COPB1-202ENST00000439561 SAP30O75446 220 aa7.34□□□□□ -1.23
COPB1-202ENST00000439561 TOMM40O96008 361 aa7.34□□□□□ -1.23
COPB1-202ENST00000439561 TMEM11P17152 192 aa7.34□□□□□ -1.23
COPB1-202ENST00000439561 C17orf58Q2M2W7 97 aa7.34□□□□□ -1.23
COPB1-202ENST00000439561 AARDQ4LEZ3 155 aa7.34□□□□□ -1.23
COPB1-202ENST00000439561 C18orf15Q96N68 181 aa7.34□□□□□ -1.23
COPB1-202ENST00000439561 S4R3C0 116 aa7.34□□□□□ -1.23
COPB1-202ENST00000439561 TCRBV4S1A1TA0A5B7 111 aa7.34□□□□□ -1.23
COPB1-202ENST00000439561 A6NDN8 102 aa7.34□□□□□ -1.23
COPB1-202ENST00000439561 F2RL2O00254 374 aa7.34□□□□□ -1.23
COPB1-202ENST00000439561 NKX2-8O15522 239 aa7.34□□□□□ -1.23
COPB1-202ENST00000439561 KIR2DL2P43627 348 aaPredicted RBP7.34□□□□□ -1.23
COPB1-202ENST00000439561 WFDC8Q8IUA0 241 aa7.34□□□□□ -1.23
COPB1-202ENST00000439561 STXBP6Q8NFX7 210 aa7.34□□□□□ -1.23
COPB1-202ENST00000439561 TRAV8-6A0A0B4J262 113 aa7.33□□□□□ -1.24
COPB1-202ENST00000439561 K7EQM0 130 aa7.33□□□□□ -1.24
COPB1-202ENST00000439561 GCSHP23434 173 aa7.33□□□□□ -1.24
COPB1-202ENST00000439561 HIST1H1AQ02539 215 aaPredicted RBP7.33□□□□□ -1.24
COPB1-202ENST00000439561 RIGQ13278 110 aa7.33□□□□□ -1.24
COPB1-202ENST00000439561 C5orf17Q8NAS9 161 aa7.33□□□□□ -1.24
COPB1-202ENST00000439561 OR4F17Q8NGA8 305 aa7.33□□□□□ -1.24
COPB1-202ENST00000439561 OR10AG1Q8NH19 301 aa7.33□□□□□ -1.24
COPB1-202ENST00000439561 VSTM2AQ8TAG5 236 aa7.33□□□□□ -1.24
COPB1-202ENST00000439561 CACNG8Q8WXS5 425 aa7.33□□□□□ -1.24
COPB1-202ENST00000439561 FAM231BA6NCW3 169 aa7.33□□□□□ -1.24
COPB1-202ENST00000439561 IGKV3-15P01624 115 aa7.33□□□□□ -1.24
COPB1-202ENST00000439561 ACP1P24666 158 aa7.33□□□□□ -1.24
COPB1-202ENST00000439561 TMEM97Q5BJF2 176 aa7.33□□□□□ -1.24
COPB1-202ENST00000439561 RASL11AQ6T310 242 aa7.33□□□□□ -1.24
COPB1-202ENST00000439561 FAM167A-AS1Q96KT0 104 aa7.33□□□□□ -1.24
COPB1-202ENST00000439561 TET2Q6N021 2002 aaPredicted RBP7.33□□□□□ -1.24
COPB1-202ENST00000439561 E7EUB6 86 aa7.33□□□□□ -1.24
COPB1-202ENST00000439561 PLP1P60201 277 aa7.33□□□□□ -1.24
COPB1-202ENST00000439561 GUSBP1Q15486 140 aa7.33□□□□□ -1.24
COPB1-202ENST00000439561 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.33□□□□□ -1.24
COPB1-202ENST00000439561 GUCD1Q96NT3 240 aa7.33□□□□□ -1.24
COPB1-202ENST00000439561 DSPP15924 2871 aaKnown RBP7.32□□□□□ -1.24
COPB1-202ENST00000439561 A0A1B0GUT8 65 aa7.32□□□□□ -1.24
COPB1-202ENST00000439561 K7EP13 123 aa7.32□□□□□ -1.24
COPB1-202ENST00000439561 CACNG7P62955 275 aa7.32□□□□□ -1.24
COPB1-202ENST00000439561 WT1-ASQ06250 92 aa7.32□□□□□ -1.24
COPB1-202ENST00000439561 ATP5L2Q7Z4Y8 100 aa7.32□□□□□ -1.24
COPB1-202ENST00000439561 OR4C13Q8NGP0 309 aa7.32□□□□□ -1.24
COPB1-202ENST00000439561 DDB2Q92466 427 aa7.32□□□□□ -1.24
COPB1-202ENST00000439561 CHCHD1Q96BP2 118 aaKnown RBP7.32□□□□□ -1.24
COPB1-202ENST00000439561 HIGD1AQ9Y241 93 aa7.32□□□□□ -1.24
COPB1-202ENST00000439561 COX7A1P24310 79 aa7.32□□□□□ -1.24
COPB1-202ENST00000439561 DIAPH2-AS1Q14236 149 aa7.32□□□□□ -1.24
COPB1-202ENST00000439561 LINC00322Q6ZN03 302 aaPredicted RBP7.32□□□□□ -1.24
COPB1-202ENST00000439561 MDS2Q8NDY4 140 aa7.32□□□□□ -1.24
COPB1-202ENST00000439561 FDCSPQ8NFU4 85 aa7.32□□□□□ -1.24
COPB1-202ENST00000439561 OSR1Q8TAX0 266 aaPredicted RBP7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms