RNA–Protein interactions for RNA: ENST00000439274.6

APP-208, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 2,517 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-208ENST00000439274 NDUFB3O43676 98 aa12.35□□□□□ -0.43
APP-208ENST00000439274 MYCNOSP40205 109 aa12.35□□□□□ -0.43
APP-208ENST00000439274 OR4A5Q8NH83 315 aa12.35□□□□□ -0.43
APP-208ENST00000439274 WIPF2Q8TF74 440 aaPredicted RBP12.35□□□□□ -0.43
APP-208ENST00000439274 TNFRSF19Q9NS68 423 aa12.35□□□□□ -0.43
APP-208ENST00000439274 Q9UFV3 132 aa12.35□□□□□ -0.43
APP-208ENST00000439274 ANKRD11Q6UB99 2663 aaPredicted RBP12.34□□□□□ -0.43
APP-208ENST00000439274 PGPA6NDG6 321 aa12.34□□□□□ -0.43
APP-208ENST00000439274 DLEU1O43261 78 aa12.34□□□□□ -0.43
APP-208ENST00000439274 UBE2G1P62253 170 aa12.34□□□□□ -0.43
APP-208ENST00000439274 LEMD1Q68G75 181 aa12.34□□□□□ -0.43
APP-208ENST00000439274 BORCS7Q96B45 105 aa12.34□□□□□ -0.43
APP-208ENST00000439274 TMEM186Q96B77 213 aa12.34□□□□□ -0.43
APP-208ENST00000439274 CLEC7AQ9BXN2 247 aa12.34□□□□□ -0.43
APP-208ENST00000439274 EPDR1Q9UM22 224 aa12.34□□□□□ -0.43
APP-208ENST00000439274 C16orf97H3BN30 126 aa12.34□□□□□ -0.43
APP-208ENST00000439274 HYPMO75409 117 aa12.34□□□□□ -0.43
APP-208ENST00000439274 THBDP07204 575 aa12.34□□□□□ -0.43
APP-208ENST00000439274 CNTFRP26992 372 aa12.34□□□□□ -0.43
APP-208ENST00000439274 LOXP28300 417 aaPredicted RBP12.34□□□□□ -0.43
APP-208ENST00000439274 LINC00322Q6ZN03 302 aaPredicted RBP12.34□□□□□ -0.43
APP-208ENST00000439274 TCF24Q7RTU0 167 aa12.34□□□□□ -0.43
APP-208ENST00000439274 GSX1Q9H4S2 264 aaPredicted RBP12.34□□□□□ -0.43
APP-208ENST00000439274 ABCA1O95477 2261 aa12.34□□□□□ -0.43
APP-208ENST00000439274 PIEZO2Q9H5I5 2752 aa12.33□□□□□ -0.44
APP-208ENST00000439274 IGLC7A0M8Q6 106 aa12.33□□□□□ -0.44
APP-208ENST00000439274 IGLC2P0DOY2 106 aa12.33□□□□□ -0.44
APP-208ENST00000439274 IGLC3P0DOY3 106 aa12.33□□□□□ -0.44
APP-208ENST00000439274 CD24P25063 80 aa12.33□□□□□ -0.44
APP-208ENST00000439274 VMA21Q3ZAQ7 101 aa12.33□□□□□ -0.44
APP-208ENST00000439274 LRRC10Q5BKY1 277 aa12.33□□□□□ -0.44
APP-208ENST00000439274 ZGRF1Q86YA3 2104 aa12.33□□□□□ -0.44
APP-208ENST00000439274 CRYABP02511 175 aaKnown RBP12.33□□□□□ -0.44
APP-208ENST00000439274 RNASEKQ6P5S7 137 aaKnown RBP12.33□□□□□ -0.44
APP-208ENST00000439274 MRPL27Q9P0M9 148 aaKnown RBP12.33□□□□□ -0.44
APP-208ENST00000439274 HSBP1O75506 76 aa12.32□□□□□ -0.44
APP-208ENST00000439274 FAM87AP0C7U9 286 aa12.32□□□□□ -0.44
APP-208ENST00000439274 DLX6P56179 175 aa12.32□□□□□ -0.44
APP-208ENST00000439274 Q6ZN92 141 aa12.32□□□□□ -0.44
APP-208ENST00000439274 PERPQ96FX8 193 aa12.32□□□□□ -0.44
APP-208ENST00000439274 TXN2Q99757 166 aa12.32□□□□□ -0.44
APP-208ENST00000439274 ALKBH7Q9BT30 221 aaPredicted RBP12.32□□□□□ -0.44
APP-208ENST00000439274 GOLT1BQ9Y3E0 138 aa12.32□□□□□ -0.44
APP-208ENST00000439274 TNFRSF13BO14836 293 aaPredicted RBP12.32□□□□□ -0.44
APP-208ENST00000439274 HIST1H1EP10412 219 aaKnown RBP12.32□□□□□ -0.44
APP-208ENST00000439274 EBLN2Q6P2I7 272 aa12.32□□□□□ -0.44
APP-208ENST00000439274 RASL11AQ6T310 242 aa12.32□□□□□ -0.44
APP-208ENST00000439274 LINC00311Q8N616 119 aa12.32□□□□□ -0.44
APP-208ENST00000439274 OR2D3Q8NGH3 330 aa12.32□□□□□ -0.44
APP-208ENST00000439274 UQCR10Q9UDW1 63 aa12.32□□□□□ -0.44
APP-208ENST00000439274 ZZEF1O43149 2961 aa12.31□□□□□ -0.44
APP-208ENST00000439274 TACC2O95359 2948 aa12.31□□□□□ -0.44
APP-208ENST00000439274 M0R2Z0 102 aa12.31□□□□□ -0.44
APP-208ENST00000439274 NBEAP1P0C6P0 100 aa12.31□□□□□ -0.44
APP-208ENST00000439274 NHLH1Q02575 133 aa12.31□□□□□ -0.44
APP-208ENST00000439274 KIR3DL3Q8N743 410 aa12.31□□□□□ -0.44
APP-208ENST00000439274 ZNF596Q8TC21 504 aa12.31□□□□□ -0.44
APP-208ENST00000439274 FAM181BA6NEQ2 426 aa12.31□□□□□ -0.44
APP-208ENST00000439274 M0QZ24 198 aa12.31□□□□□ -0.44
APP-208ENST00000439274 SH2D7A6NKC9 451 aaPredicted RBP12.3□□□□□ -0.44
APP-208ENST00000439274 IGHV1-8P0DP01 117 aa12.3□□□□□ -0.44
APP-208ENST00000439274 PMCHL1Q16048 86 aa12.3□□□□□ -0.44
APP-208ENST00000439274 Q56UQ5 140 aa12.3□□□□□ -0.44
APP-208ENST00000439274 FAM71F2Q6NXP2 309 aa12.3□□□□□ -0.44
APP-208ENST00000439274 Q71RC1 249 aaPredicted RBP12.3□□□□□ -0.44
APP-208ENST00000439274 STPG4Q8N801 248 aa12.3□□□□□ -0.44
APP-208ENST00000439274 A0A1B0GXF2 115 aa12.3□□□□□ -0.44
APP-208ENST00000439274 CRYGCP07315 174 aa12.3□□□□□ -0.44
APP-208ENST00000439274 PRB4P10163 310 aaPredicted RBP12.3□□□□□ -0.44
APP-208ENST00000439274 HNRNPA3P51991 378 aaKnown RBP12.3□□□□□ -0.44
APP-208ENST00000439274 KLF5Q13887 457 aaPredicted RBP12.3□□□□□ -0.44
APP-208ENST00000439274 TMEM155Q4W5P6 130 aa12.3□□□□□ -0.44
APP-208ENST00000439274 COL5A1-AS1Q5SY13 56 aa12.3□□□□□ -0.44
APP-208ENST00000439274 C11orf42Q8N5U0 333 aa12.3□□□□□ -0.44
APP-208ENST00000439274 GTSF1Q8WW33 167 aa12.3□□□□□ -0.44
APP-208ENST00000439274 URB1-AS1Q96HZ7 61 aa12.3□□□□□ -0.44
APP-208ENST00000439274 GPR82Q96P67 336 aa12.3□□□□□ -0.44
APP-208ENST00000439274 TOX4O94842 621 aa12.29□□□□□ -0.44
APP-208ENST00000439274 FOXA3P55318 350 aaPredicted RBP12.29□□□□□ -0.44
APP-208ENST00000439274 SPATA12Q7Z6I5 190 aa12.29□□□□□ -0.44
APP-208ENST00000439274 CLEC5AQ9NY25 188 aa12.29□□□□□ -0.44
APP-208ENST00000439274 KLK10O43240 276 aa12.29□□□□□ -0.44
APP-208ENST00000439274 OR2J3O76001 311 aa12.29□□□□□ -0.44
APP-208ENST00000439274 GP9P14770 177 aa12.29□□□□□ -0.44
APP-208ENST00000439274 RPL27AP46776 148 aaKnown RBP12.29□□□□□ -0.44
APP-208ENST00000439274 ZNF137PP52743 207 aa12.29□□□□□ -0.44
APP-208ENST00000439274 FOXC1Q12948 553 aa12.29□□□□□ -0.44
APP-208ENST00000439274 C8orf31Q8N9H6 132 aa12.29□□□□□ -0.44
APP-208ENST00000439274 PGLYRP4Q96LB8 373 aa12.29□□□□□ -0.44
APP-208ENST00000439274 MLST8Q9BVC4 326 aa12.29□□□□□ -0.44
APP-208ENST00000439274 RPP21Q9H633 154 aaKnown RBP12.29□□□□□ -0.44
APP-208ENST00000439274 KLF12Q9Y4X4 402 aa12.29□□□□□ -0.44
APP-208ENST00000439274 ACACAQ13085 2346 aa12.28□□□□□ -0.44
APP-208ENST00000439274 TRAV8-1A0A0A6YYK1 113 aa12.28□□□□□ -0.44
APP-208ENST00000439274 MC5RP33032 325 aa12.28□□□□□ -0.44
APP-208ENST00000439274 STXBP6Q8NFX7 210 aa12.28□□□□□ -0.44
APP-208ENST00000439274 RNASE6Q93091 150 aaKnown RBP12.28□□□□□ -0.44
APP-208ENST00000439274 TRGV9Q99603 122 aa12.28□□□□□ -0.44
APP-208ENST00000439274 CHRDL1Q9BU40 450 aa12.28□□□□□ -0.44
APP-208ENST00000439274 Q9H3A6 140 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms